RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 RGNQ15493 299 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 ZNF311Q5JNZ3 666 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 WBP2NLQ6ICG8 309 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC22A25Q6T423 547 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 LINGO2Q7L985 606 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 AAED1Q7RTV5 226 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 GPAT4Q86UL3 456 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 P2RY8Q86VZ1 359 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 OR9K2Q8NGE7 335 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 C3orf49Q96BT1 292 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC25A36Q96CQ1 311 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 WFDC6Q9BQY6 131 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 SPATA9Q9BWV2 254 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 RMND5AQ9H871 391 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC52A3Q9NQ40 469 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC17A5Q9NRA2 495 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 TAS2R16Q9NYV7 291 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 SEC14L4Q9UDX3 406 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 ZNF232Q9UNY5 417 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 ATP23Q9Y6H3 246 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 JMJD1CQ15652 2540 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 NR5A2O00482 541 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 NCF2P19878 526 aaPredicted RBP11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 CBLP22681 906 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 SELENOPP49908 381 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 FABP6P51161 128 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 CRISP3P54108 245 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 TUBA1BP68363 451 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 TUBA4AP68366 448 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 TXNL4AP83876 142 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 EGR4Q05215 589 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 LARS2Q15031 903 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 GLIPR1L2Q4G1C9 344 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 LIN52Q52LA3 116 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 HIKESHIQ53FT3 197 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 C1orf140Q5VVS0 124 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 TMEM225Q6GV28 225 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 PAQR6Q6TCH4 344 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 TUBA1AQ71U36 451 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 DTX2Q86UW9 622 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 EPHX4Q8IUS5 362 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 ZNF440Q8IYI8 595 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 THOC1Q96FV9 657 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 RADILQ96JH8 1075 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 CACNG6Q9BXT2 260 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 PARPBPQ9NWS1 579 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 MALT1Q9UDY8 824 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 POU2F3Q9UKI9 436 aa11.71□□□□□ -0.53
NUDCD3-201ENST00000338427 CR1P17927 2039 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 AQP7P3A6NL99 342 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 A8MVM7 634 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 TMCC2O75069 709 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 UPK3AO75631 287 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 LGI1O95970 557 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 GPIP06744 558 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 PTAFRP25105 342 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 TTKP33981 857 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 COPZ1P61923 177 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 TTMPQ5BVD1 217 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 AGBL2Q5U5Z8 902 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 C11orf71Q6IPW1 123 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 TMEM108Q6UXF1 575 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 DNM1P46Q6ZS02 220 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 CREB3L2Q70SY1 520 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 NFKBIDQ8NI38 313 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 KTI12Q96EK9 354 aaPredicted RBP11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 DHRS9Q9BPW9 319 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 PTDSS2Q9BVG9 487 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 ALG2Q9H553 416 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 IKZF5Q9H5V7 419 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 CALML5Q9NZT1 146 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 CCDC167Q9P0B6 97 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 VAPAQ9P0L0 249 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 SLC9A8Q9Y2E8 581 aa11.7□□□□□ -0.54
NUDCD3-201ENST00000338427 HIVEP2P31629 2446 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 IGHV4-30-2A0A087WSY4 118 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 A0A096LPI6 279 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 NPIPB7O75200 414 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 ERLIN1O75477 346 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 LY6HO94772 140 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 UQCRBP14927 111 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 MPGP29372 298 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 RPS5P46782 204 aaKnown RBP11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 AQP5P55064 265 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 RNF220Q5VTB9 566 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 AGAP6Q5VW22 663 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 OR7E24Q6IFN5 339 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 BLOC1S3Q6QNY0 202 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 KLHL17Q6TDP4 642 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 MSANTD1Q6ZTZ1 278 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 TAAR8Q969N4 342 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 TMEM45BQ96B21 275 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 HS6ST2Q96MM7 605 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 TAPBPLQ9BX59 468 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 AMBRA1Q9C0C7 1298 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 BCL2L10Q9HD36 194 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 A4GALTQ9NPC4 353 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 TCF7L2Q9NQB0 619 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 DCTN4Q9UJW0 460 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 MOKQ9UQ07 419 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms