RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 A6NCN8 305 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 PRODHO43272 600 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 RDH16O75452 317 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 WDPCPO95876 746 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 HTR2AP28223 471 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 GCGRP47871 477 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 EFNB1P98172 346 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 HFEQ30201 348 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 FAM74A1Q5RGS3 127 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 NHLRC1Q6VVB1 395 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 TOMM5Q8N4H5 51 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 OR51G2Q8NGK0 314 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 RSC1A1Q92681 617 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 IER2Q9BTL4 223 aa12.79□□□□□ -0.36
SF1-202ENST00000334944 HRKO00198 91 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 SPDEFO95238 335 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 GSTM3P21266 225 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 TLX1P31314 330 aaPredicted RBP12.78□□□□□ -0.36
SF1-202ENST00000334944 GABRA3P34903 492 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 ILF3Q12906 894 aaKnown RBP eCLIP12.78□□□□□ -0.36
SF1-202ENST00000334944 NDUFA9Q16795 377 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 PLBD1Q6P4A8 553 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 CD300LDQ6UXZ3 194 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 ZNF704Q6ZNC4 412 aaPredicted RBP12.78□□□□□ -0.36
SF1-202ENST00000334944 CBLN2Q8IUK8 224 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 COX18Q8N8Q8 333 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 OR4N2Q8NGD1 307 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 OR4D10Q8NGI6 311 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 OR9A4Q8NGU2 314 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 SLC37A2Q8TED4 501 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 ZDHHC1Q8WTX9 485 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 ACOT11Q8WXI4 607 aaPredicted RBP12.78□□□□□ -0.36
SF1-202ENST00000334944 MOAP1Q96BY2 351 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 ZFYVE21Q9BQ24 234 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 HCAR1Q9BXC0 346 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 OR10A4Q9H209 315 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 USP36Q9P275 1121 aaKnown RBP12.78□□□□□ -0.36
SF1-202ENST00000334944 GLS2Q9UI32 602 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 MSRAQ9UJ68 235 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 CYP8B1Q9UNU6 501 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 SELENOFO60613 162 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 IGF2P01344 180 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 FGF2P09038 288 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 GABRG2P18507 467 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 HTR4Q13639 388 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 ELP2Q6IA86 826 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 MZT2AQ6P582 158 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 TAF8Q7Z7C8 310 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 OR2L13Q8N349 312 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 UXS1Q8NBZ7 420 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 OR51A7Q8NH64 312 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 SERINC2Q96SA4 455 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 HINT3Q9NQE9 182 aaKnown RBP12.78□□□□□ -0.36
SF1-202ENST00000334944 CTSFQ9UBX1 484 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 CD207Q9UJ71 328 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 SLC22A7Q9Y694 548 aa12.78□□□□□ -0.36
SF1-202ENST00000334944 H0YC42 278 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 SIGLEC6O43699 453 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 FABP1P07148 127 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 ADRB1P08588 477 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 MRPL3P09001 348 aaKnown RBP12.77□□□□□ -0.36
SF1-202ENST00000334944 ZNF806P0C7X5 589 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 HOXB1P14653 301 aaPredicted RBP12.77□□□□□ -0.36
SF1-202ENST00000334944 MAKP20794 623 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 ZNF136P52737 540 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 CEBPEQ15744 281 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 SLC36A2Q495M3 483 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 SLC22A18Q96BI1 424 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 PTCHD1Q96NR3 888 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 CDCA3Q99618 268 aaPredicted RBP12.77□□□□□ -0.36
SF1-202ENST00000334944 MTHFD2LQ9H903 347 aaPredicted RBP12.77□□□□□ -0.36
SF1-202ENST00000334944 ISG20L2Q9H9L3 353 aaKnown RBP12.77□□□□□ -0.36
SF1-202ENST00000334944 IL21RQ9HBE5 538 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 MGAT4CQ9UBM8 478 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 PILRAQ9UKJ1 303 aa12.77□□□□□ -0.36
SF1-202ENST00000334944 TRAV27A0A087WT01 109 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 SYT5O00445 386 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 WNT1P04628 370 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 HMGN1P05114 100 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 PRKAR1BP31321 381 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 VEGFCP49767 419 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 KIR2DS3Q14952 304 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 SWI5Q1ZZU3 235 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 DCST2Q5T1A1 773 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 RBMS3Q6XE24 437 aaKnown RBP12.77□□□□□ -0.37
SF1-202ENST00000334944 SIRT6Q8N6T7 355 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 CYB561A3Q8NBI2 242 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 TM4SF19Q96DZ7 209 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 CCDC3Q9BQI4 270 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 MED18Q9BUE0 208 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 ARL6Q9H0F7 186 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 NTMQ9P121 344 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 RASD1Q9Y272 281 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 ASXL3Q9C0F0 2248 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 A0A1B0GVI7 797 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 DUXAA6NLW8 204 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 B4DGG1 531 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 PRR23D1E9PI22 279 aaPredicted RBP12.77□□□□□ -0.37
SF1-202ENST00000334944 AIPO00170 330 aa12.77□□□□□ -0.37
SF1-202ENST00000334944 GPR31O00270 319 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms