RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 RAB12Q6IQ22 244 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 USP53Q70EK8 1073 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 NUDT13Q86X67 352 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 STK35Q8TDR2 534 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 HS6ST2Q96MM7 605 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 NOX4Q9NPH5 578 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 HAO2Q9NYQ3 351 aa22.4■■□□□ 1.18
SOX1-201ENST00000330949 TRBV2A0A0J9YWF9 115 aa22.39■■□□□ 1.18
SOX1-201ENST00000330949 NRG2O14511 850 aaPredicted RBP22.39■■□□□ 1.18
SOX1-201ENST00000330949 TBX6O95947 436 aaPredicted RBP22.39■■□□□ 1.18
SOX1-201ENST00000330949 SSTP61278 116 aa22.39■■□□□ 1.18
SOX1-201ENST00000330949 ACTA2P62736 377 aa22.39■■□□□ 1.18
SOX1-201ENST00000330949 ACTG2P63267 376 aa22.39■■□□□ 1.18
SOX1-201ENST00000330949 GLT8D1Q68CQ7 371 aa22.39■■□□□ 1.18
SOX1-201ENST00000330949 RBMS3Q6XE24 437 aaKnown RBP22.39■■□□□ 1.18
SOX1-201ENST00000330949 TMEM64Q6YI46 380 aa22.39■■□□□ 1.18
SOX1-201ENST00000330949 LILRB2Q8N423 598 aa22.39■■□□□ 1.18
SOX1-201ENST00000330949 PELI1Q96FA3 418 aa22.39■■□□□ 1.18
SOX1-201ENST00000330949 MS4A8Q9BY19 250 aa22.39■■□□□ 1.18
SOX1-201ENST00000330949 DPH1Q9BZG8 443 aa22.39■■□□□ 1.18
SOX1-201ENST00000330949 WRBO00258 174 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 CD1AP06126 327 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 CALCBP10092 127 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 FOLR2P14207 255 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 NCBP2P52298 156 aaKnown RBP eCLIP22.39■■□□□ 1.17
SOX1-201ENST00000330949 PSMD4P55036 377 aaKnown RBP22.39■■□□□ 1.17
SOX1-201ENST00000330949 FOXK2Q01167 660 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 RPL22L1Q6P5R6 122 aaKnown RBP22.39■■□□□ 1.17
SOX1-201ENST00000330949 UNQ9370/PRO34162Q6UXP9 181 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 DNM1P46Q6ZS02 220 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 TRAM1L1Q8N609 369 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 MIB2Q96AX9 1013 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 GFI1Q99684 422 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 TLNRD1Q9H1K6 362 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 APMAPQ9HDC9 416 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 SIDT1Q9NXL6 827 aaKnown RBP22.39■■□□□ 1.17
SOX1-201ENST00000330949 MOKQ9UQ07 419 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 V9GY05 133 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 TMEM200CA6NKL6 621 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 UBE2CO00762 179 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 GABRR2P28476 465 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 PRKAR1BP31321 381 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 TM4SF4P48230 202 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 ARFIP1P53367 373 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 FXYD6P3P58550 94 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 SMCO1Q147U7 214 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 FAM129CQ86XR2 697 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 TMEM151BQ8IW70 566 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 SYS1Q8N2H4 156 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 OR1J4Q8NGS1 313 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 CD99L2Q8TCZ2 262 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 CXorf40AQ8TE69 158 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 ZG16BQ96DA0 208 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 VRK1Q99986 396 aaPredicted RBP22.39■■□□□ 1.17
SOX1-201ENST00000330949 CALML5Q9NZT1 146 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 SLC7A7Q9UM01 511 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 TNFSF18Q9UNG2 199 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 SLC35A3Q9Y2D2 325 aa22.39■■□□□ 1.17
SOX1-201ENST00000330949 XIRP2A4UGR9 3374 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 RIIAD1A6NNX1 92 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 NDUFS6O75380 124 aaKnown RBP22.38■■□□□ 1.17
SOX1-201ENST00000330949 CD8AP01732 235 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 CSF1P09603 554 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 NTSP30990 170 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 ADH7P40394 386 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 CLDN12P56749 244 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 TAS2R38P59533 333 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 PRAMEF14Q5SWL7 426 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 RPL13AP3Q6NVV1 102 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 Q6ZVL8 140 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 LRIG1Q96JA1 1093 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 ZNF285Q96NJ3 590 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 OR5V1Q9UGF6 321 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 NUDT19A8MXV4 375 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 TMPRSS11DO60235 418 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 IL9P15248 144 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 EPCAMP16422 314 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 NPBWR1P48145 328 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 LHX8Q68G74 356 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 SFXN5Q8TD22 340 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 PEX11GQ96HA9 241 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 BBS4Q96RK4 519 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 SEC11CQ9BY50 192 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 RHBGQ9H310 441 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 POT1Q9NUX5 634 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 THSD7BQ9C0I4 1608 aa22.38■■□□□ 1.17
SOX1-201ENST00000330949 MTCL1Q9Y4B5 1905 aaKnown RBP22.38■■□□□ 1.17
SOX1-201ENST00000330949 OR2W5A6NFC9 320 aa22.37■■□□□ 1.17
SOX1-201ENST00000330949 C5orf52A6NGY3 159 aa22.37■■□□□ 1.17
SOX1-201ENST00000330949 H7C417 338 aa22.37■■□□□ 1.17
SOX1-201ENST00000330949 RCBTB2O95199 551 aa22.37■■□□□ 1.17
SOX1-201ENST00000330949 IGHV2-70P01814 119 aa22.37■■□□□ 1.17
SOX1-201ENST00000330949 PTNP21246 168 aa22.37■■□□□ 1.17
SOX1-201ENST00000330949 SLC2A5P22732 501 aa22.37■■□□□ 1.17
SOX1-201ENST00000330949 POLR2LP62875 67 aaKnown RBP22.37■■□□□ 1.17
SOX1-201ENST00000330949 LIN54Q6MZP7 749 aa22.37■■□□□ 1.17
SOX1-201ENST00000330949 HSD11B1LQ7Z5J1 315 aa22.37■■□□□ 1.17
SOX1-201ENST00000330949 IGSF21Q96ID5 467 aa22.37■■□□□ 1.17
SOX1-201ENST00000330949 RIOK2Q9BVS4 552 aaKnown RBP22.37■■□□□ 1.17
SOX1-201ENST00000330949 CPEB1Q9BZB8 566 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms