RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 ASB1Q9Y576 335 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 RAB19A4D1S5 217 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 MPPED1O15442 326 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 RAB3DO95716 219 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 ZNF44P15621 663 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 MAKP20794 623 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 POLR2HP52434 150 aaKnown RBP9.44□□□□□ -0.9
CHD3-201ENST00000330494 LIM2P55344 173 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 SSTP61278 116 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 GALEQ14376 348 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 DESI1Q6ICB0 168 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 FAM83HQ6ZRV2 1179 aaPredicted RBP9.44□□□□□ -0.9
CHD3-201ENST00000330494 ZNF597Q96LX8 424 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 HCAR1Q9BXC0 346 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 BORCS7-ASMTA0A0B4J1R7 106 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 PLSCR5A0PG75 271 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 LRIT2A6NDA9 550 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 DNAJB5O75953 348 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 SPDEFO95238 335 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 HTR3AP46098 478 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 SPCS2Q15005 226 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 VWA2Q5GFL6 755 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 BAIAP2L2Q6UXY1 529 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 ESPNLQ6ZVH7 1005 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 ZNF695Q8IW36 515 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 SLC16A11Q8NCK7 471 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 SIMC1Q8NDZ2 872 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 RASD2Q96D21 266 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 TMEM68Q96MH6 324 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 OR5B12Q96R08 314 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 MKRN2Q9H000 416 aaKnown RBP9.44□□□□□ -0.9
CHD3-201ENST00000330494 SLC6A20Q9NP91 592 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 CTSLP07711 333 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 PSPHP78330 225 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 PLEKHN1Q494U1 663 aaPredicted RBP9.44□□□□□ -0.9
CHD3-201ENST00000330494 KCTD20Q7Z5Y7 419 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 RPS10P5Q9NQ39 176 aa9.44□□□□□ -0.9
CHD3-201ENST00000330494 OR6C65A6NJZ3 312 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 DVL2O14641 736 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 RACK1P63244 317 aaKnown RBP9.43□□□□□ -0.9
CHD3-201ENST00000330494 GGTA1PQ4G0N0 100 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 ZNF836Q6ZNA1 936 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 NOXA1Q86UR1 476 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 C8orf44Q96CB5 159 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 ZNF583Q96ND8 569 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 PPA2Q9H2U2 334 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 NOSIPQ9Y314 301 aaKnown RBP9.43□□□□□ -0.9
CHD3-201ENST00000330494 V9GY05 133 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 C2CD4DB7Z1M9 353 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 LYRM1O43325 122 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 METAP1P53582 386 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 PDE7AQ13946 482 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 TRMT12Q53H54 448 aaKnown RBP9.43□□□□□ -0.9
CHD3-201ENST00000330494 OPN5Q6U736 354 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 DCUN1D4Q92564 292 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 RPL3LQ92901 407 aaKnown RBP9.43□□□□□ -0.9
CHD3-201ENST00000330494 SNAPC3Q92966 411 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 SDSLQ96GA7 329 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 COQ10AQ96MF6 247 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 NELFAQ9H3P2 528 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 OLAHQ9NV23 265 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 SSC5DA1L4H1 1573 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 ZC3H12DA2A288 527 aaKnown RBP9.43□□□□□ -0.9
CHD3-201ENST00000330494 GABRPO00591 440 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 SLC16A14Q7RTX9 510 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 LILRB4Q8NHJ6 448 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 ZNF566Q969W8 418 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 THAP7Q9BT49 309 aaPredicted RBP9.43□□□□□ -0.9
CHD3-201ENST00000330494 AMBRA1Q9C0C7 1298 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 SLC23A2Q9UGH3 650 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 PPT2Q9UMR5 302 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 B8ZZF3 427 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 C14orf28Q4W4Y0 310 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 PYCR3Q53H96 274 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 DPY19L2P1Q6NXN4 242 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 TECPR1Q7Z6L1 1165 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 OR14K1Q8NGZ2 314 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 CHTF18Q8WVB6 975 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 LCORQ96JN0 433 aaPredicted RBP9.43□□□□□ -0.9
CHD3-201ENST00000330494 MRGPRX1Q96LB2 322 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 P2RY12Q9H244 342 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 TMEM265A0A087WTH1 108 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 LOC105369274A0A096LPK9 316 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 TMED7-TICAM2A0A0A6YYA0 188 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 HMX2A2RU54 273 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 OR2W5A6NFC9 320 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 TLCD2A6NGC4 264 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 NRG2O14511 850 aaPredicted RBP9.43□□□□□ -0.9
CHD3-201ENST00000330494 HOXC11O43248 304 aaPredicted RBP9.43□□□□□ -0.9
CHD3-201ENST00000330494 ALPLP05186 524 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 ALDH3B2P48448 385 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 MC2RQ01718 297 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 RAB40BQ12829 278 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 KIAA0907Q7Z7F0 614 aaPredicted RBP9.43□□□□□ -0.9
CHD3-201ENST00000330494 OR4N4Q8N0Y3 316 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 TESQ9UGI8 421 aaKnown RBP9.43□□□□□ -0.9
CHD3-201ENST00000330494 TMED7Q9Y3B3 224 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 ARPC1BO15143 372 aaKnown RBP9.43□□□□□ -0.9
CHD3-201ENST00000330494 HCRTR1O43613 425 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 LCMT2O60294 686 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms