RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 RABEP2Q9H5N1 569 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 ADPRHL2Q9NX46 363 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 RPS6KB2Q9UBS0 482 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 POU2F3Q9UKI9 436 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 MAGED1Q9Y5V3 778 aaPredicted RBP15.63■□□□□ 0.09
TPM1-203ENST00000317516 SLC25A15Q9Y619 301 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 FREM1Q5H8C1 2179 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 USF3Q68DE3 2245 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 AQP7P3A6NL99 342 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 KRT33AO76009 404 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 NUDT7P0C024 238 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 PRG2P13727 222 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 MPGP29372 298 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 ZNF83P51522 516 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 CDH11P55287 796 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 BNIP2Q12982 314 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 PGGHGQ32M88 737 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 LRIF1Q5T3J3 769 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 GCNT6Q5T4J0 391 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 C1orf140Q5VVS0 124 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 AGAP6Q5VW22 663 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 SLC22A25Q6T423 547 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 SERPINA11Q86U17 422 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 FUNDC1Q8IVP5 155 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 OR9K2Q8NGE7 335 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 MAL2Q969L2 176 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 EBF4Q9BQW3 602 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 SLC7A10Q9NS82 523 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 INTS9Q9NV88 658 aaKnown RBP15.62■□□□□ 0.09
TPM1-203ENST00000317516 NPAP1Q9NZP6 1156 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 CORO2BQ9UQ03 480 aa15.62■□□□□ 0.09
TPM1-203ENST00000317516 ZNF469Q96JG9 3925 aaPredicted RBP15.62■□□□□ 0.09
TPM1-203ENST00000317516 NAV3Q8IVL0 2385 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 PRR14LQ5THK1 2151 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 OR6C65A6NJZ3 312 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 EVPLLA8MZ36 301 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 SHISA9B4DS77 424 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 PDLIM1O00151 329 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 NR5A2O00482 541 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 AHSA1O95433 338 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 ITGA5P08648 1049 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 CD40P25942 277 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 PRKAR1BP31321 381 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 ATP4BP51164 291 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 CLEC12BQ2HXU8 276 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 AGKQ53H12 422 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 TSPO2Q5TGU0 170 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 REEP3Q6NUK4 255 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 MFSD8Q8NHS3 518 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 C3orf49Q96BT1 292 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 SLCO5A1Q9H2Y9 848 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 BARX1Q9HBU1 254 aaPredicted RBP15.61■□□□□ 0.09
TPM1-203ENST00000317516 RASD1Q9Y272 281 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 AMDHD2Q9Y303 409 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 CHST2Q9Y4C5 530 aa15.61■□□□□ 0.09
TPM1-203ENST00000317516 PRORSD1PA6NEY8 169 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 ELOA3DA6NLF2 546 aaPredicted RBP15.6■□□□□ 0.09
TPM1-203ENST00000317516 HMGB1P1B2RPK0 211 aaPredicted RBP15.6■□□□□ 0.09
TPM1-203ENST00000317516 M0R1B8 84 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 NPIPB7O75200 414 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 WNT11O96014 354 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 PAX7P23759 505 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 GTF2E2P29084 291 aaKnown RBP15.6■□□□□ 0.09
TPM1-203ENST00000317516 CDKN1AP38936 164 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 PRPS1P60891 318 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 CDK6Q00534 326 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 VEZF1Q14119 521 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 SQLEQ14534 574 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 ELOA3BQ3SY89 546 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 C9orf135Q5VTT2 229 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 KLHL24Q6TFL4 600 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 C5orf46Q6UWT4 87 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 HDXQ7Z353 690 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 DTX2Q86UW9 622 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 ZIC4Q8N9L1 334 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 ELOA3Q8NG57 546 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 HS6ST2Q96MM7 605 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 ZNF385AQ96PM9 386 aaKnown RBP15.6■□□□□ 0.09
TPM1-203ENST00000317516 TRAF4Q9BUZ4 470 aaPredicted RBP15.6■□□□□ 0.09
TPM1-203ENST00000317516 AMBRA1Q9C0C7 1298 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 C12orf10Q9HB07 376 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 SLC17A5Q9NRA2 495 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 ARGLU1Q9NWB6 273 aaPredicted RBP15.6■□□□□ 0.09
TPM1-203ENST00000317516 SLC25A37Q9NYZ2 338 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 GMEB1Q9Y692 573 aa15.6■□□□□ 0.09
TPM1-203ENST00000317516 RAI1Q7Z5J4 1906 aaPredicted RBP15.6■□□□□ 0.09
TPM1-203ENST00000317516 A0A1W2PR80 420 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 FRS3O43559 492 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 OR2T1O43869 369 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 SERPINB7O75635 380 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 ARAFP10398 606 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 HOXB9P17482 250 aaPredicted RBP15.59■□□□□ 0.09
TPM1-203ENST00000317516 SLC6A2P23975 617 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 FOXG1P55316 489 aaPredicted RBP15.59■□□□□ 0.09
TPM1-203ENST00000317516 TNK1Q13470 666 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 TTMPQ5BVD1 217 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 CREB3L2Q70SY1 520 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 FBXL14Q8N1E6 418 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 WDR31Q8NA23 367 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 BHLHE22Q8NFJ8 381 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms