RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 STK11Q15831 433 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 OR7E24Q6IFN5 339 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 VRK2Q86Y07 508 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 CLIP4Q8N3C7 705 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 OR52P1PQ8NH57 321 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 PNPT1Q8TCS8 783 aaKnown RBP13.68□□□□□ -0.22
FOXR1-201ENST00000317011 GTF2H4Q92759 462 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 TMEM45BQ96B21 275 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 TRMT61AQ96FX7 289 aaKnown RBP13.68□□□□□ -0.22
FOXR1-201ENST00000317011 LRRC37BQ96QE4 947 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 NAA11Q9BSU3 229 aaPredicted RBP13.68□□□□□ -0.22
FOXR1-201ENST00000317011 SF3B5Q9BWJ5 86 aaKnown RBP13.68□□□□□ -0.22
FOXR1-201ENST00000317011 MYLK2Q9H1R3 596 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 BCL2L10Q9HD36 194 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 THUMPD1Q9NXG2 353 aaKnown RBP13.68□□□□□ -0.22
FOXR1-201ENST00000317011 P2RX2Q9UBL9 471 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 GMEB1Q9Y692 573 aa13.68□□□□□ -0.22
FOXR1-201ENST00000317011 ALPK2Q86TB3 2170 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 A0A0G2JPF8 293 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 LIPT2A6NK58 231 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 HNRNPCL2B2RXH8 293 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 HNRNPCL3B7ZW38 293 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 HNRNPCL1O60812 293 aaKnown RBP13.67□□□□□ -0.22
FOXR1-201ENST00000317011 IGHV3-9P01782 118 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 GKN3PP0CG01 181 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 HNRNPCL4P0DMR1 293 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 PTAFRP25105 342 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 IDUAP35475 653 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 CLEC12BQ2HXU8 276 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 GTDC1Q4AE62 458 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 RNF220Q5VTB9 566 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 ZNF836Q6ZNA1 936 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 FUNDC1Q8IVP5 155 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 VPS33AQ96AX1 596 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 DNAJA3Q96EY1 480 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 ITCHQ96J02 903 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 RSPO3Q9BXY4 272 aaPredicted RBP13.67□□□□□ -0.22
FOXR1-201ENST00000317011 PAIP1Q9H074 479 aaKnown RBP13.67□□□□□ -0.22
FOXR1-201ENST00000317011 RMND5AQ9H871 391 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 SLC52A3Q9NQ40 469 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 MRGBPQ9NV56 204 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 MGAT4BQ9UQ53 548 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 PCDHB14Q9Y5E9 798 aa13.67□□□□□ -0.22
FOXR1-201ENST00000317011 PLCE1Q9P212 2302 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 A0A1W2PP18 115 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 E7EQL1 145 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 FZD7O75084 574 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 RAD51DO75771 328 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 IGHV4-39P01824 125 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 CD40P25942 277 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 CRATP43155 626 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 CRISP3P54108 245 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 DSTNP60981 165 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 FAPQ12884 760 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 RGNQ15493 299 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 LIN52Q52LA3 116 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 TSPO2Q5TGU0 170 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 PRAMEF8Q5VWM4 474 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 PRAMEF7Q5VXH5 474 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 WBP2NLQ6ICG8 309 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 BLOC1S3Q6QNY0 202 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 LSRQ86X29 649 aaPredicted RBP13.66□□□□□ -0.22
FOXR1-201ENST00000317011 SNX32Q86XE0 403 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 PRIMA1Q86XR5 153 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 TREML1Q86YW5 311 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 UBE2J2Q8N2K1 259 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 TMEM99Q8N816 258 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 C1orf162Q8NEQ5 155 aaPredicted RBP13.66□□□□□ -0.22
FOXR1-201ENST00000317011 OR52E4Q8NGH9 312 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 SLC35B4Q969S0 331 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 SPDL1Q96EA4 605 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 SPATA9Q9BWV2 254 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 SLCO5A1Q9H2Y9 848 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 SLC7A10Q9NS82 523 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 SLC9A8Q9Y2E8 581 aa13.66□□□□□ -0.22
FOXR1-201ENST00000317011 CIB4A0PJX0 185 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 AQP7P3A6NL99 342 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 CCT8L1PA6NM43 557 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 A8MVM7 634 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 ABCD4O14678 606 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 SLC22A2O15244 555 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 GPIP06744 558 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 PRG2P13727 222 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 UQCRBP14927 111 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 CXCR1P25024 350 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 CDKN1AP38936 164 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 CEACAM7Q14002 265 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 MAPRE2Q15555 327 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 C11orf71Q6IPW1 123 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 TMEM108Q6UXF1 575 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 C17orf78Q8N4C9 275 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 FITM2Q8N6M3 262 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 POU5F2Q8N7G0 328 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 OR52N5Q8NH56 324 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 AURKBQ96GD4 344 aaPredicted RBP13.65□□□□□ -0.22
FOXR1-201ENST00000317011 TMEM19Q96HH6 336 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 REG4Q9BYZ8 158 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 SLC17A5Q9NRA2 495 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 TMEM45AQ9NWC5 275 aa13.65□□□□□ -0.22
FOXR1-201ENST00000317011 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms