RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PRKAR1AP10644 381 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 CPEP16870 476 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 RPS5P46782 204 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 CCR6P51684 374 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 HCCSP53701 268 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SMIM11AP58511 58 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 RRAS2P62070 204 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SNRPGP62308 76 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 CRYZQ08257 329 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ZSWIM7Q19AV6 140 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 PLK5Q496M5 336 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 TMEM91Q6ZNR0 172 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 RANBP3LQ86VV4 465 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 C10orf53Q8N6V4 93 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SAMD12Q8N8I0 201 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 PIGXQ8TBF5 258 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 TMEM239Q8WW34 195 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ACOT11Q8WXI4 607 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 BPIFA2Q96DR5 249 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 WDFY2Q96P53 400 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 TNFRSF13CQ96RJ3 184 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 DPCDQ9BVM2 203 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 VN1R1Q9GZP7 353 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 RBFOX1Q9NWB1 397 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 OCIAD1Q9NX40 245 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 NTMQ9P121 344 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ZNF346Q9UL40 294 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 MGAT4AQ9UM21 535 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 PRELID1Q9Y255 219 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SF3B6Q9Y3B4 125 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 A0A087WV62 115 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 LEUTXA8MZ59 168 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 H3BMH7 237 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 MTRF1O75570 445 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 OPN1LWP04000 364 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 EIF4EP06730 217 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 PIPP12273 146 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ITPKBP27987 946 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SHC1P29353 583 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 NOS3P29474 1203 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ERP29P30040 261 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ACVR1BP36896 505 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 MAP1BP46821 2468 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 FXYD6P3P58550 94 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 RPS7P62081 194 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SLC3A1Q07837 685 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 GPR176Q14439 515 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 TCTE1Q5JU00 501 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ARL9Q6T311 187 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 KIRREL2Q6UWL6 708 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 QSOX2Q6ZRP7 698 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 CPOQ8IVL8 374 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 C1orf210Q8IVY1 113 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ZNF595Q8IYB9 648 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SIRT6Q8N6T7 355 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 GDPD1Q8N9F7 314 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 CEP76Q8TAP6 659 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SLC2A12Q8TD20 617 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SAP25Q8TEE9 199 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 TRIM63Q969Q1 353 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ZNF559Q9BR84 538 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 CHIAQ9BZP6 476 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ABCG5Q9H222 651 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 PPP1R3EQ9H7J1 279 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SLC22A11Q9NSA0 550 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 SIDT1Q9NXL6 827 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ING3Q9NXR8 418 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 STMN3Q9NZ72 180 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 PILRBQ9UKJ0 227 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 DIMT1Q9UNQ2 313 aaKnown RBP6.97□□□□□ -1.29
TRIM55-202ENST00000315962 ADAM18Q9Y3Q7 739 aa6.97□□□□□ -1.29
TRIM55-202ENST00000315962 LOC105371267A0A1B0GV96 52 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 E9PI62 339 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 BLOC1S5-TXNDC5H3BN57 136 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 NUPL2O15504 423 aaKnown RBP6.96□□□□□ -1.3
TRIM55-202ENST00000315962 NKX2-2O95096 273 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 FBLP22087 321 aaKnown RBP6.96□□□□□ -1.3
TRIM55-202ENST00000315962 EPHA8P29322 1005 aaPredicted RBP6.96□□□□□ -1.3
TRIM55-202ENST00000315962 SLC1A3P43003 542 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 GAS1P54826 345 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 SLC37A1P57057 533 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 TOMM34Q15785 309 aaPredicted RBP6.96□□□□□ -1.3
TRIM55-202ENST00000315962 HYAL4Q2M3T9 481 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 PMS2CLQ68D20 193 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 PRSS45Q7RTY3 260 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 MARCH3Q86UD3 253 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 UBALD2Q8IYN6 164 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF615Q8N8J6 731 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 OR11H7Q8NGC8 314 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF501Q96CX3 271 aaPredicted RBP6.96□□□□□ -1.3
TRIM55-202ENST00000315962 IFT27Q9BW83 186 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 NUDT9Q9BW91 350 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 OR52D1Q9H346 318 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 TESQ9UGI8 421 aaKnown RBP6.96□□□□□ -1.3
TRIM55-202ENST00000315962 PTPRZ1P23471 2315 aaPredicted RBP6.96□□□□□ -1.3
TRIM55-202ENST00000315962 TRAPPC13A5PLN9 417 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 POM121CA8CG34 1229 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 SIGLEC5O15389 551 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 CDC40O60508 579 aaKnown RBP eCLIP6.96□□□□□ -1.3
TRIM55-202ENST00000315962 PRAMEF2O60811 474 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms