RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 STT3AP46977 705 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 CA13Q8N1Q1 262 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 POGLUT1Q8NBL1 392 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 PRR7Q8TB68 274 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 C4orf36Q96KX1 117 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 NT5DC2Q9H857 520 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 MRPL15Q9P015 296 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 KNL1Q8NG31 2342 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 SPAARA0A1B0GVQ0 90 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 LCMT2O60294 686 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 GRPP07492 148 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 RAB3BP20337 219 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 EPHA8P29322 1005 aaPredicted RBP9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 UGT2B10P36537 528 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 DUSP2Q05923 314 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 TRMT12Q53H54 448 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 BCORP1Q8N888 145 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 GPR148Q8TDV2 347 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 PSMF1Q92530 271 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 AKAP1Q92667 903 aaKnown RBP eCLIP9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 RFT1Q96AA3 541 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 DLGAP1O14490 977 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 LRRTM2O43300 516 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 AKR1C4P17516 323 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 AIMP2Q13155 320 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 GLYR1Q49A26 553 aaPredicted RBP9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 OTUD1Q5VV17 481 aaPredicted RBP9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 OR7E24Q6IFN5 339 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 CPEB3Q8NE35 698 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 ZNF224Q9NZL3 707 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 EIF5AP63241 154 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 FAPQ12884 760 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 ZNF322Q6U7Q0 402 aaPredicted RBP9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 ZNF836Q6ZNA1 936 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 OR4D9Q8NGE8 314 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 FBXO27Q8NI29 283 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 MVB12AQ96EY5 273 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 DHRS4Q9BTZ2 278 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 EGLN3Q9H6Z9 239 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 TMEM181Q9P2C4 612 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 LRRC37AA6NMS7 1700 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 FXYD6-FXYD2A0A087WZ82 144 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 IGHV3-15A0A0B4J1V0 119 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 BTBD17A6NE02 478 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 APOBEC1P41238 236 aaKnown RBP9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 OR1C1Q15619 314 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 COX20Q5RI15 118 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 FRMPD2BQ6IN97 320 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 SPRED2Q7Z698 418 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 AIFM2Q9BRQ8 373 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 FXYD6Q9H0Q3 95 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 MAN2C1Q9NTJ4 1040 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 ERVK13-1Q9NX77 482 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 PMF1-BGLAPU3KQ54 211 aa9.89□□□□□ -0.83
SYNPO2-201ENST00000307142 A0A1W2PPC1 479 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 B4DXG7 233 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 DOK2O60496 412 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 GFRA3O60609 400 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 LSSP48449 732 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 ASB17Q8WXJ9 295 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 DDX31Q9H8H2 851 aaKnown RBP9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 ZNF355PQ9NSJ1 428 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 KCNN3Q9UGI6 736 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 SURF4O15260 269 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 ALDOCP09972 364 aaKnown RBP9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 EPHA1P21709 976 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 EMP3P54852 163 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 TMEM244Q5VVB8 128 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 OR6Q1Q8NGQ2 317 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 STACQ99469 402 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 COL4A1P02462 1669 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 A0A1W2PPH5 198 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 GAB1Q13480 694 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 PLEKHN1Q494U1 663 aaPredicted RBP9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 PM20D2Q8IYS1 436 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 DMRTB1Q96MA1 342 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 MGLLQ99685 303 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 TXLNGYQ9BZA5 131 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 CTSFQ9UBX1 484 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 KRBA1A5PL33 1030 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 FAM90A27PA6NNH2 459 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 ARAFP10398 606 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 TACR1P25103 407 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 TRHRP34981 398 aaPredicted RBP9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 GNB2P62879 340 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 TCTN1Q2MV58 587 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 NADK2Q4G0N4 442 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 KHDC1LQ5JSQ8 128 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 TRILQ7L0X0 811 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 SCCPDHQ8NBX0 429 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 MEGF11A6BM72 1044 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 A8MVM7 634 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 CYB5BO43169 146 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 ICOSLGO75144 302 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 ALDOBP05062 364 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 CR2P20023 1033 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 PSMA6P60900 246 aaKnown RBP9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 MFSD12Q6NUT3 480 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 TSPYL5Q86VY4 417 aaPredicted RBP9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 RNF113BQ8IZP6 322 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms