RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 TRAPPC13A5PLN9 417 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 C2CD4DB7Z1M9 353 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 TNFRSF4P43489 277 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 TMEM255AQ5JRV8 349 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 SLITRK4Q8IW52 837 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 THAP3Q8WTV1 239 aaPredicted RBP13.43□□□□□ -0.26
PTPN9-201ENST00000306726 SLITRK2Q9H156 845 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 FBRSQ9HAH7 460 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 KLHL42Q9P2K6 505 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 MN1Q10571 1320 aaPredicted RBP13.43□□□□□ -0.26
PTPN9-201ENST00000306726 SBK2P0C263 348 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 AANATQ16613 207 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 FAM69AQ5T7M9 428 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 FAM220AQ7Z4H9 259 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 OR51D1Q8NGF3 324 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 S100A16Q96FQ6 103 aaKnown RBP13.43□□□□□ -0.26
PTPN9-201ENST00000306726 MRGPRX3Q96LB0 322 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 MRPS2Q9Y399 296 aaKnown RBP13.43□□□□□ -0.26
PTPN9-201ENST00000306726 B3GALT2O43825 422 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 RDH16O75452 317 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 EGFP01133 1207 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 CCKBRP32239 447 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 IRF4Q15306 451 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 STK11Q15831 433 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 NIPAL3Q6P499 406 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 LRRC69Q6ZNQ3 347 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 CAMKMTQ7Z624 323 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 JAZF1Q86VZ6 243 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 NRROSQ86YC3 692 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 PHOSPHO1Q8TCT1 267 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 RBPMSQ93062 196 aaKnown RBP13.43□□□□□ -0.26
PTPN9-201ENST00000306726 PPP1R14AQ96A00 147 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 C1QTNF2Q9BXJ5 285 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 CENPMQ9NSP4 180 aa13.43□□□□□ -0.26
PTPN9-201ENST00000306726 RABL2AQ9UBK7 228 aaPredicted RBP13.43□□□□□ -0.26
PTPN9-201ENST00000306726 TSPAN11A1L157 253 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 EEF1E1-BLOC1S5C9J1V9 151 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 TOR1AO14656 332 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 SLC6A1P30531 599 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 PCBP4P57723 403 aaKnown RBP13.42□□□□□ -0.26
PTPN9-201ENST00000306726 AADACL4Q5VUY2 407 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 ZCCHC12Q6PEW1 402 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 NSMAFQ92636 917 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 Q96M85 177 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 POM121BA6NF01 834 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 KRT33AO76009 404 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 SRFP11831 508 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 ACHEP22303 614 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 MLF2Q15773 248 aaPredicted RBP13.42□□□□□ -0.26
PTPN9-201ENST00000306726 HNRNPA1L2Q32P51 320 aaKnown RBP13.42□□□□□ -0.26
PTPN9-201ENST00000306726 LINC00303Q3SY05 128 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 DCST2Q5T1A1 773 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 MFSD12Q6NUT3 480 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 OR2L5Q8NG80 312 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 ST8SIA4Q92187 359 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 FGF14Q92915 247 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 ZNF436Q9C0F3 470 aaPredicted RBP13.42□□□□□ -0.26
PTPN9-201ENST00000306726 NOP16Q9Y3C1 178 aaKnown RBP13.42□□□□□ -0.26
PTPN9-201ENST00000306726 CEP250Q9BV73 2442 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 SNRNP200O75643 2136 aaKnown RBP13.42□□□□□ -0.26
PTPN9-201ENST00000306726 SLC22A31A6NKX4 558 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 B8ZZF3 427 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 PDCD5O14737 125 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 ARL6IP5O75915 188 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 EML2O95834 649 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 FXYD6P3P58550 94 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 MBOAT2Q6ZWT7 520 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 DIO2Q92813 273 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 TRAF4Q9BUZ4 470 aaPredicted RBP13.42□□□□□ -0.26
PTPN9-201ENST00000306726 ATG5Q9H1Y0 275 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 MRPS17Q9Y2R5 130 aaKnown RBP13.42□□□□□ -0.26
PTPN9-201ENST00000306726 SPACA6W5XKT8 324 aa13.42□□□□□ -0.26
PTPN9-201ENST00000306726 PRRC2CQ9Y520 2896 aaKnown RBP13.42□□□□□ -0.26
PTPN9-201ENST00000306726 DUXAA6NLW8 204 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 CDK2AP1O14519 115 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 CREBL2O60519 120 aaPredicted RBP13.41□□□□□ -0.26
PTPN9-201ENST00000306726 DRD1P21728 446 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 GJA4P35212 333 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 TUSC1Q2TAM9 212 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 EOGTQ5NDL2 527 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 FAM180AQ6UWF9 173 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 PLPP7Q8NBV4 271 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 ZPLD1Q8TCW7 415 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 FBXW5Q969U6 566 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 SHDQ96IW2 340 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 TMEM231Q9H6L2 316 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 MTHFD2LQ9H903 347 aaPredicted RBP13.41□□□□□ -0.26
PTPN9-201ENST00000306726 CYSLTR2Q9NS75 346 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 SDHAF2Q9NX18 166 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 DSPPQ9NZW4 1301 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 THY1P04216 161 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 ACSM4P0C7M7 580 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 CISD3P0C7P0 127 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 PSMB1P20618 241 aaKnown RBP13.41□□□□□ -0.26
PTPN9-201ENST00000306726 GNALP38405 381 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 AQP2P41181 271 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 AMZ1Q400G9 498 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 UNQ6126/PRO20091Q6UXV3 157 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 SHISA6Q6ZSJ9 500 aa13.41□□□□□ -0.26
PTPN9-201ENST00000306726 DPY19L4Q7Z388 723 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms