RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 FRRS1Q6ZNA5 592 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 NPAS4Q8IUM7 802 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 SFXN5Q8TD22 340 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 DVL3Q92997 716 aaPredicted RBP11.99□□□□□ -0.49
TVP23A-201ENST00000299866 MNTQ99583 582 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 ZNF471Q9BX82 626 aaPredicted RBP11.99□□□□□ -0.49
TVP23A-201ENST00000299866 XKR8Q9H6D3 395 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 PLEKHM1Q9Y4G2 1056 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 A0A1W2PRU2 124 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 TRAPPC13A5PLN9 417 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 ZNF254O75437 659 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 RBBP9O75884 186 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 CNR1P21554 472 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 KCNJ3P48549 501 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 ZNF136P52737 540 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 OR1Q1Q15612 314 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 DCUN1D3Q8IWE4 304 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 OR51S1Q8NGJ8 323 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 TNFRSF13CQ96RJ3 184 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 BIN3Q9NQY0 253 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 TM7SF3Q9NS93 570 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 ZNF223Q9UK11 482 aaPredicted RBP11.99□□□□□ -0.49
TVP23A-201ENST00000299866 INSL5Q9Y5Q6 135 aa11.99□□□□□ -0.49
TVP23A-201ENST00000299866 LRIT2A6NDA9 550 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 ZNF749O43361 778 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 F12P00748 615 aaPredicted RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 MPIP34949 423 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 GUCA2AQ02747 115 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 TMEM215Q68D42 235 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 ACOT4Q8N9L9 421 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 TSPAN10Q9H1Z9 355 aaPredicted RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 EXO5Q9H790 373 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 IL21RQ9HBE5 538 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 IL36AQ9UHA7 158 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 CCL26Q9Y258 94 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 SIGLEC7Q9Y286 467 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 COL4A3Q01955 1670 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 LINC00587B1AMM8 73 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 RPP14O95059 124 aaKnown RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 OLFM2O95897 454 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 UBBP0CG47 229 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 UBCP0CG48 685 aaKnown RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 F3P13726 295 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 HOXB1P14653 301 aaPredicted RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 SLC2A5P22732 501 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 CERS1P27544 350 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 RPS27AP62979 156 aaKnown RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 UBA52P62987 128 aaKnown RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 CSNK1G2P78368 415 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 SWI5Q1ZZU3 235 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 MANEAQ5SRI9 462 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 PRAMEF8Q5VWM4 474 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 PRAMEF7Q5VXH5 474 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 MRM1Q6IN84 353 aaKnown RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 PARS2Q7L3T8 475 aaKnown RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 RANBP3LQ86VV4 465 aaPredicted RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 GLB1L2Q8IW92 636 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 NANPQ8TBE9 248 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 SLC19A3Q9BZV2 496 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 OR52A5Q9H2C5 316 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 ASF1BQ9NVP2 202 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 SAGE1Q9NXZ1 904 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 SLC23A2Q9UGH3 650 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 TCF20Q9UGU0 1960 aaKnown RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 SULT1B1O43704 296 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 RPA2P15927 270 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 NDUFS1P28331 727 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 FAUP35544 74 aaKnown RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 CCDC157Q569K6 752 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 RPL22L1Q6P5R6 122 aaKnown RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 FAM111BQ6SJ93 734 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 MAMSTRQ6ZN01 415 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 TMED4Q7Z7H5 227 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 IFNL1Q8IU54 200 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 SLC35F2Q8IXU6 374 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 EID2Q8N6I1 236 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 PCSK9Q8NBP7 692 aaKnown RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 SP7Q8TDD2 431 aaPredicted RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 DTD2Q96FN9 168 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 UTP23Q9BRU9 249 aaKnown RBP11.98□□□□□ -0.49
TVP23A-201ENST00000299866 ACTRT3Q9BYD9 372 aa11.98□□□□□ -0.49
TVP23A-201ENST00000299866 SPTBP11277 2137 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 TRAV14DV4A0A0A6YYC5 116 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 WASH3PC4AMC7 463 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 GNB5O14775 395 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 LAMP2P13473 410 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 GTF2F2P13984 249 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 MGMTP16455 207 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 OR2W3Q7Z3T1 314 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 OR1S2Q8NGQ3 325 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 OR2L2Q8NH16 312 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 HAVCR1Q96D42 359 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 MTHFD2LQ9H903 347 aaPredicted RBP11.97□□□□□ -0.49
TVP23A-201ENST00000299866 BARX1Q9HBU1 254 aaPredicted RBP11.97□□□□□ -0.49
TVP23A-201ENST00000299866 ADAM29Q9UKF5 820 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 KCNK7Q9Y2U2 307 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 FRMPD3Q5JV73 1810 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 A0A1B0GVT2 93 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 KANTRA0A1W2PQU2 76 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 RFPL4AA6NLU0 287 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms