RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 FBXL3Q9UKT7 428 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZNF814B7Z6K7 855 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 DEFB109BQ30KR1 87 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 FAM69AQ5T7M9 428 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 ARSKQ6UWY0 536 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 CSNK2A3Q8NEV1 391 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 PIGCQ92535 297 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 GPR78Q96P69 363 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 WDR37Q9Y2I8 494 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 TRBV4-1A0A0J9YWV2 114 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 TMEM221A6NGB7 291 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 C4orf47A7E2U8 309 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 M0R296 226 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 MPPED1O15442 326 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 CNOT4O95628 575 aaKnown RBP16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 MT-ATP6P00846 226 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 PPICP45877 212 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 OLIG1Q8TAK6 271 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 SARAFQ96BY9 339 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 NELFAQ9H3P2 528 aa16.38■□□□□ 0.21
CDC42EP3-201ENST00000295324 MEN1O00255 615 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 APOBEC1P41238 236 aaKnown RBP16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZNF813Q6ZN06 617 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 ELMOD2Q8IZ81 293 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 ABHD11Q8NFV4 315 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 OR5J2Q8NH18 312 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 MZB1Q8WU39 189 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZNF845Q96IR2 970 aaPredicted RBP16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 FOXN4Q96NZ1 517 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 SYT4Q9H2B2 425 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 LOXHD1Q8IVV2 1947 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 FGF17O60258 216 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 MAP2K3P46734 347 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 SIGLEC14Q08ET2 396 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 CAMKMTQ7Z624 323 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZNF454Q8N9F8 522 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 OR1N1Q8NGS0 311 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 STOML3Q8TAV4 291 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 C4orf36Q96KX1 117 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 LRFN1Q9P244 771 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 R4GN57 208 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 DBHP09172 617 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 ARL3P36405 182 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 XKR7Q5GH72 579 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 C6orf183Q5T699 404 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 MOB3CQ70IA8 216 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 SLC35D2Q76EJ3 337 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 OR2A1Q8NGT9 310 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 BCL7BQ9BQE9 202 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 SLC19A3Q9BZV2 496 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 BABAM2Q9NXR7 383 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 MTCH2Q9Y6C9 303 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 METTL15A6NJ78 407 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZNF44P15621 663 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 BDH1Q02338 343 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 SQSTM1Q13501 440 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 DUSP5Q16690 384 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 ACSM3Q53FZ2 586 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 COX20Q5RI15 118 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 C1orf140Q5VVS0 124 aa16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZNF431Q8TF32 576 aaPredicted RBP16.37■□□□□ 0.21
CDC42EP3-201ENST00000295324 TRAPPC2LH3BP13 241 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 ADARB1P78563 741 aaKnown RBP16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 SLC35F3Q8IY50 421 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 CA13Q8N1Q1 262 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 PAPOLGQ9BWT3 736 aaKnown RBP16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 CD300LGQ6UXG3 332 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 FAM57BQ71RH2 274 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 SLC43A2Q8N370 569 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZNF610Q8N9Z0 462 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 SCGB1C1Q8TD33 95 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 MAELQ96JY0 434 aaKnown RBP16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 ACP2P11117 423 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 CYHR1Q6ZMK1 362 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 CCDC71LQ8N9Z2 235 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 COQ8AQ8NI60 647 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 APH1AQ96BI3 265 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 C8orf44Q96CB5 159 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 EGLN3Q9H6Z9 239 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 AK6Q9Y3D8 172 aaKnown RBP16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 COL24A1Q17RW2 1714 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 CHRNB4P30926 498 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 RHEBQ15382 184 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 LRRC56Q8IYG6 542 aaPredicted RBP16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 CMTM1Q8IZ96 169 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 DTWD2Q8NBA8 298 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 SGCZQ96LD1 299 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 FAM117AQ9C073 453 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 TSPAN11A1L157 253 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 LCMT2O60294 686 aaKnown RBP16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 VAMP5O95183 116 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 SLC10A1Q14973 349 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 DTX3Q8N9I9 347 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 C1QTNF3Q9BXJ4 246 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 NIPAL2Q9H841 368 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 RDH8Q9NYR8 311 aa16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 MYO5AQ9Y4I1 1855 aaKnown RBP16.36■□□□□ 0.21
CDC42EP3-201ENST00000295324 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 STMND1H3BQB6 276 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZNF593O00488 134 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms