RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 JUNBP17275 347 aaPredicted RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 PGCP20142 388 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 DNASE1P24855 282 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 FXYD4P59646 89 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 TSPAN31Q12999 210 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SLC22A6Q4U2R8 563 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 LYSMD2Q8IV50 215 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 GPALPP1Q8IXQ4 340 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 ADGRF3Q8IZF5 1079 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 TM9SF4Q92544 642 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 PGAM5Q96HS1 289 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SDF2Q99470 211 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SEMA4CQ9C0C4 833 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 C11orf54Q9H0W9 315 aaPredicted RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 UBQLN3Q9H347 655 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 ZNF304Q9HCX3 659 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 C2orf42Q9NWW7 574 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 RARRES3Q9UL19 164 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 AP1M2Q9Y6Q5 423 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 A0A0G2JMP0 313 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 A0A0X1KG70 313 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 MAN2B1O00754 1011 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 CASC3O15234 703 aaKnown RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 ZNF749O43361 778 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 LAMTOR5O43504 91 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SLC19A2O60779 497 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 FZD7O75084 574 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 DNAJB6O75190 326 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 KNG1P01042 644 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 HRGP04196 525 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 AMY2AP04746 511 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 PTHLHP12272 177 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 PTPN6P29350 595 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 TAS2R43P59537 309 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 CCINQ13939 588 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 XKRXQ6PP77 449 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 MBOAT2Q6ZWT7 520 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 P4HA3Q7Z4N8 544 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 TOR1AIP2Q8NFQ8 470 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 OR4M2Q8NGB6 313 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 OR2I1PQ8NGU4 316 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 LGALS14Q8TCE9 139 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 CPNE2Q96FN4 548 aaPredicted RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 FYTTD1Q96QD9 318 aaKnown RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 ZNF471Q9BX82 626 aaPredicted RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 ELOVL3Q9HB03 270 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 HINT3Q9NQE9 182 aaKnown RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 BABAM2Q9NXR7 383 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 RCE1Q9Y256 329 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 KCNE1BA0A087WTH5 132 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 ZNF208O43345 1280 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SUSD5O60279 629 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 UTS2O95399 124 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 LGI1O95970 557 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SCG5P05408 212 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 HIST1H1CP16403 213 aaKnown RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 NPR2P20594 1047 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 TNFRSF4P43489 277 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 ART1P52961 327 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 IFITM3Q01628 133 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 RAB40BQ12829 278 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 ULK3Q6PHR2 472 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 LILRA6Q6PI73 481 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 APOOLQ6UXV4 268 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 OR14L1PQ8NHC6 308 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 MRPL38Q96DV4 380 aaKnown RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 TMEM38AQ9H6F2 299 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 PTGES2Q9H7Z7 377 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 MOV10Q9HCE1 1003 aaKnown RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 NOX4Q9NPH5 578 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 ACOXLQ9NUZ1 547 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 ALG5Q9Y673 324 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 TRPM7Q96QT4 1865 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 NCOR1O75376 2440 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 IGHV3-15A0A0B4J1V0 119 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 ZNF593O00488 134 aaPredicted RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 POLR1CO15160 346 aaPredicted RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 CTSVO60911 334 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 HTR3BO95264 441 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SPINK2P20155 84 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 POU3F3P20264 500 aaPredicted RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 RFC3P40938 356 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 PI4KAP42356 2102 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 UBE2MP61081 183 aaKnown RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 ACTA2P62736 377 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 ACTG2P63267 376 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 MLLT11Q13015 90 aaPredicted RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 ILKQ13418 452 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 TDGQ13569 410 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 HNF4GQ14541 408 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 NR0B2Q15466 257 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 TMEM92Q6UXU6 159 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 PNLDC1Q8NA58 520 aaKnown RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 INO80EQ8NBZ0 244 aaPredicted RBP4.42□□□□□ -1.7
UBR1-201ENST00000290650 ARL6Q9H0F7 186 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 SLC6A15Q9H2J7 730 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 KIR3DX1Q9H7L2 352 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 MCCC2Q9HCC0 563 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 FBXL4Q9UKA2 621 aa4.42□□□□□ -1.7
UBR1-201ENST00000290650 MPDZO75970 2070 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms