RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 GLYR1Q49A26 553 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 OR2T5Q6IEZ7 315 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 TUBA3EQ6PEY2 450 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 JAGN1Q8N5M9 183 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 FADS6Q8N9I5 356 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 OR2T29Q8NH02 315 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 RBM24Q9BX46 236 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 ASPNQ9BXN1 380 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 RSPO3Q9BXY4 272 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 LIN28AQ9H9Z2 209 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 TIMMDC1Q9NPL8 285 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 CAMK2AQ9UQM7 478 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 MRPS18CQ9Y3D5 142 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 WIF1Q9Y5W5 379 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 A0A087WV48 116 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 ARGFXA6NJG6 315 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 CCNB2O95067 398 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 GADD45GO95257 159 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 CD79AP11912 226 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF20P17024 532 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 HTR3AP46098 478 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 P2RX1P51575 399 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 TRIM16LQ309B1 348 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 SLC25A53Q5H9E4 307 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 KLHL17Q6TDP4 642 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF283Q8N7M2 679 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 Q96MT0 163 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 NODALQ96S42 347 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 CIB1Q99828 191 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 MRPS26Q9BYN8 205 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 RHCGQ9UBD6 479 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 ITGB1BP2Q9UKP3 347 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 C7orf72A4D263 438 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 SLC35F4A4IF30 521 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 K7ENP7 123 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 NKX2-8O15522 239 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 RBM34P42696 430 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 CYB561P49447 251 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF136P52737 540 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 GPR85P60893 370 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 PLAURQ03405 335 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 OGFRL1Q5TC84 451 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 HMBOX1Q6NT76 420 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 INO80CQ6PI98 192 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 IGFL3Q6UXB1 125 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 TSEN54Q7Z6J9 526 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 BEST3Q8N1M1 668 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 OR4C15Q8NGM1 316 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 OR5K1Q8NHB7 308 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 SCMH1Q96GD3 660 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 TM9SF2Q99805 663 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 UTP23Q9BRU9 249 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 FUZQ9BT04 418 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 QRSL1Q9H0R6 528 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 GPR83Q9NYM4 423 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 FLRT3Q9NZU0 649 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 SCN2AQ99250 2005 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 CENPVL1A0A0U1RR11 272 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 A0A1W2PRQ8 180 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 SNPHO15079 494 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 ANGPTL1O95841 491 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 WT1P19544 449 aaPredicted RBP7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 DNAJA1P31689 397 aaKnown RBP7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 NKAPLQ5M9Q1 402 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 FCRLBQ6BAA4 426 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 COMTD1Q86VU5 262 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 SVOPQ8N4V2 548 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 TCEANCQ8N8B7 351 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 OR5W2Q8NH69 310 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 ENKURQ8TC29 256 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 TTYH2Q9BSA4 534 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 SRA1Q9HD15 236 aaKnown RBP7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 GLS2Q9UI32 602 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 A4GNTQ9UNA3 340 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF354AO60765 605 aaPredicted RBP7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 ANXA2P07355 339 aaKnown RBP7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 ERCC1P07992 297 aaPredicted RBP7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 PGCP20142 388 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 ACAA2P42765 397 aaKnown RBP7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF117Q03924 483 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 MRPL49Q13405 166 aaKnown RBP7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 DEFB109BQ30KR1 87 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 SLC22A10Q63ZE4 541 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 WBP2NLQ6ICG8 309 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 CLIP4Q8N3C7 705 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 GPR137CQ8N3F9 429 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 SIRT6Q8N6T7 355 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 MDS2Q8NDY4 140 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 OR4C3Q8NH37 302 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 LRTOMTQ8WZ04 291 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 ST8SIA1Q92185 356 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 HAS2Q92819 552 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 ZG16BQ96DA0 208 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 ICAM5Q9UMF0 924 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 KCNMB2Q9Y691 235 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 TLN2Q9Y4G6 2542 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 TRAPPC13A5PLN9 417 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 SOX14O95416 240 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 IFI30P13284 250 aa7.67□□□□□ -1.18
PTPDC1-201ENST00000288976 SPINK2P20155 84 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms