RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 SEC14L4Q9UDX3 406 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 DOCK7Q96N67 2140 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 DOPEY1Q5JWR5 2465 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 MED12LQ86YW9 2145 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 CYTIPO60759 359 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 CLDN14O95500 239 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 CLDN1O95832 211 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 PLGP00747 810 aaPredicted RBP11.37□□□□□ -0.59
SS18-202ENST00000269138 BGLAPP02818 100 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 MT-ND1P03886 318 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 ERFP50548 548 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 UGT2B15P54855 530 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 RASGEF1BQ0VAM2 473 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 TTC33Q6PID6 262 aaPredicted RBP11.37□□□□□ -0.59
SS18-202ENST00000269138 ASRGL1Q7L266 308 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 BTLAQ7Z6A9 289 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 MCEMP1Q8IX19 187 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 TUSC5Q8IXB3 177 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 PFN4Q8NHR9 129 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 STARD4Q96DR4 205 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 ZHX1-C8orf76Q96EF9 292 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 MOGAT1Q96PD6 335 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 ZNF300Q96RE9 604 aaPredicted RBP11.37□□□□□ -0.59
SS18-202ENST00000269138 TAPBPLQ9BX59 468 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 MEPEQ9NQ76 525 aaPredicted RBP11.37□□□□□ -0.59
SS18-202ENST00000269138 ZNF629Q9UEG4 869 aaPredicted RBP11.37□□□□□ -0.59
SS18-202ENST00000269138 SLC7A8Q9UHI5 535 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 POMPQ9Y244 141 aa11.37□□□□□ -0.59
SS18-202ENST00000269138 ZNF716A6NP11 495 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 DVL2O14641 736 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 DNPH1O43598 174 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 PIP5K1CO60331 668 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 SS18L1O75177 396 aaPredicted RBP11.36□□□□□ -0.59
SS18-202ENST00000269138 IL18BPO95998 194 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 CRHP06850 196 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 THRBP10828 461 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 GRPRP30550 384 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 OPRM1P35372 400 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 P2RY4P51582 365 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 ST3GAL3Q11203 375 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 RNPS1Q15287 305 aaKnown RBP11.36□□□□□ -0.59
SS18-202ENST00000269138 MTX3Q5HYI7 312 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 OTUD3Q5T2D3 398 aaPredicted RBP11.36□□□□□ -0.59
SS18-202ENST00000269138 FAM69AQ5T7M9 428 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 GTF2IRD2BQ6EKJ0 949 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 ABLIM2Q6H8Q1 611 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 PAQR6Q6TCH4 344 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 C5orf46Q6UWT4 87 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 FAM214BQ7L5A3 538 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 NUFIP2Q7Z417 695 aaKnown RBP11.36□□□□□ -0.59
SS18-202ENST00000269138 GTF2IRD2Q86UP8 949 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 OFCC1Q8IZS5 231 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 SLC43A2Q8N370 569 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 C10orf53Q8N6V4 93 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 PIK3C3Q8NEB9 887 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 TMEM239Q8WW34 195 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 GMPPAQ96IJ6 420 aaPredicted RBP11.36□□□□□ -0.59
SS18-202ENST00000269138 LRGUKQ96M69 825 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 PSMG3-AS1Q96PY0 264 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 EPYCQ99645 322 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 PSD2Q9BQI7 771 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 NAA11Q9BSU3 229 aaPredicted RBP11.36□□□□□ -0.59
SS18-202ENST00000269138 SFXN3Q9BWM7 321 aa11.36□□□□□ -0.59
SS18-202ENST00000269138 NMNAT1Q9HAN9 279 aaPredicted RBP11.36□□□□□ -0.59
SS18-202ENST00000269138 FAM32AQ9Y421 112 aaKnown RBP11.36□□□□□ -0.59
SS18-202ENST00000269138 AQP7P3A6NL99 342 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 M0R082 166 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 OR2T1O43869 369 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 EIF1BO60739 113 aaKnown RBP11.35□□□□□ -0.59
SS18-202ENST00000269138 FZD7O75084 574 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 CH25HO95992 272 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 CGAP01215 116 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 FABP3P05413 133 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 YES1P07947 543 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 RHCEP18577 417 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 GRNP28799 593 aaKnown RBP11.35□□□□□ -0.59
SS18-202ENST00000269138 AGTR1P30556 359 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 CTBP2P56545 445 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 TRAM2Q15035 370 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 TBPL2Q6SJ96 375 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 CYP4Z1Q86W10 505 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 MEX3DQ86XN8 651 aaKnown RBP11.35□□□□□ -0.59
SS18-202ENST00000269138 ZDHHC21Q8IVQ6 265 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 ADGRG5Q8IZF4 528 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 KDM8Q8N371 416 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 LRRC17Q8N6Y2 441 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 ZNF417Q8TAU3 575 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 PIGXQ8TBF5 258 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 UTP4Q969X6 686 aaKnown RBP11.35□□□□□ -0.59
SS18-202ENST00000269138 ZNF587Q96SQ5 575 aaPredicted RBP11.35□□□□□ -0.59
SS18-202ENST00000269138 PIP5K1AQ99755 562 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 OPN3Q9H1Y3 402 aaPredicted RBP11.35□□□□□ -0.59
SS18-202ENST00000269138 IL1RAPQ9NPH3 570 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 KCNJ16Q9NPI9 418 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 GLRX2Q9NS18 164 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 C20orf141Q9NUB4 165 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 TESMINQ9Y4I5 508 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 MPDZO75970 2070 aa11.35□□□□□ -0.59
SS18-202ENST00000269138 SPTBN1Q01082 2364 aaKnown RBP11.35□□□□□ -0.59
SS18-202ENST00000269138 EEF1E1-BLOC1S5C9J1V9 151 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms