RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 NTN1O95631 604 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 RLN1P04808 185 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 ELFN1P0C7U0 828 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 FOLR2P14207 255 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 ZNF19P17023 458 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 GCGRP47871 477 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 PGDP52209 483 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 TAS2R41P59536 307 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 TAS2R43P59537 309 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 PEA15Q15121 130 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 ACER2Q5QJU3 275 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 ZNF425Q6IV72 752 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 C3orf33Q6P1S2 294 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 PLBD1Q6P4A8 553 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 ZCCHC12Q6PEW1 402 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 MUC20Q8N307 709 aaPredicted RBP12.1□□□□□ -0.47
NUP54-201ENST00000264883 STK35Q8TDR2 534 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 GHSRQ92847 366 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 RAD51AP1Q96B01 352 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 PHYHIPLQ96FC7 376 aa12.1□□□□□ -0.47
NUP54-201ENST00000264883 RSPH9Q9H1X1 276 aaPredicted RBP12.1□□□□□ -0.47
NUP54-201ENST00000264883 NUP210Q8TEM1 1887 aaPredicted RBP12.09□□□□□ -0.47
NUP54-201ENST00000264883 ZNF729A6NN14 1252 aaPredicted RBP12.09□□□□□ -0.47
NUP54-201ENST00000264883 C1orf196B1AJZ1 125 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 EPPINO95925 133 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 NFYBP25208 207 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 DDX6P26196 483 aaKnown RBP eCLIP12.09□□□□□ -0.47
NUP54-201ENST00000264883 AGTR1P30556 359 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 BUD31P41223 144 aaPredicted RBP12.09□□□□□ -0.47
NUP54-201ENST00000264883 HCCSP53701 268 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 NRG3P56975 720 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 MEF2AQ02078 507 aaPredicted RBP12.09□□□□□ -0.47
NUP54-201ENST00000264883 ARHGAP19Q14CB8 494 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 RAB12Q6IQ22 244 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 TMEM71Q6P5X7 295 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 OLIG3Q7RTU3 272 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 MISPQ8IVT2 679 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 PIGXQ8TBF5 258 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 MOAP1Q96BY2 351 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 C4orf36Q96KX1 117 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 ZNF471Q9BX82 626 aaPredicted RBP12.09□□□□□ -0.47
NUP54-201ENST00000264883 PCBD2Q9H0N5 130 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 RPH3AQ9Y2J0 694 aaPredicted RBP12.09□□□□□ -0.47
NUP54-201ENST00000264883 DENND4CQ5VZ89 1909 aa12.09□□□□□ -0.47
NUP54-201ENST00000264883 TRAV14DV4A0A0A6YYC5 116 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 ANTXRLA6NF34 631 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 TXNL1O43396 289 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 LEFTY1O75610 366 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 OMPP47874 163 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 JMJD6Q6NYC1 403 aaPredicted RBP12.08□□□□□ -0.47
NUP54-201ENST00000264883 FAM199XQ6PEV8 388 aaPredicted RBP12.08□□□□□ -0.47
NUP54-201ENST00000264883 NUDT18Q6ZVK8 323 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 MEPCEQ7L2J0 689 aaKnown RBP12.08□□□□□ -0.47
NUP54-201ENST00000264883 ZNF765Q7L2R6 523 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.08□□□□□ -0.47
NUP54-201ENST00000264883 C17orf64Q86WR6 236 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 KCNRGQ8N5I3 272 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 WDSUB1Q8N9V3 476 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 ZSCAN1Q8NBB4 408 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 TMEM41AQ96HV5 264 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 DERL3Q96Q80 235 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 MED20Q9H944 212 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 RNF122Q9H9V4 155 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 ZMIZ1Q9ULJ6 1067 aa12.08□□□□□ -0.47
NUP54-201ENST00000264883 TMEM272A0A1B0GTI8 110 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 PRAMEF27A3QJZ7 478 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 COLCA2A8K830 154 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 BCL2L11O43521 198 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 B4GALT2O60909 372 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 LILRB5O75023 590 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 ARL6IP5O75915 188 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 RNF224P0DH78 156 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 PTHLHP12272 177 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 ABOP16442 354 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 P2RX1P51575 399 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 STXBP1P61764 594 aaKnown RBP12.08□□□□□ -0.48
NUP54-201ENST00000264883 ST3GAL3Q11203 375 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 OR2B11Q5JQS5 317 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 NIPAL3Q6P499 406 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 ZNF740Q8NDX6 193 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 OR2T33Q8NG76 320 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 CXorf40AQ8TE69 158 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 XAGE5Q8WWM1 108 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 ASB13Q8WXK3 278 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 CNTNAP3BQ96NU0 1288 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 PFDN5Q99471 154 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 WDR77Q9BQA1 342 aaPredicted RBP12.08□□□□□ -0.48
NUP54-201ENST00000264883 KCNK12Q9HB15 430 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 CALML5Q9NZT1 146 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 TRPC4Q9UBN4 977 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 IL36AQ9UHA7 158 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 SLC13A4Q9UKG4 626 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 GPR34Q9UPC5 381 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 MOKQ9UQ07 419 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 PLEKHA6Q9Y2H5 1048 aa12.08□□□□□ -0.48
NUP54-201ENST00000264883 OR6C76A6NM76 312 aa12.07□□□□□ -0.48
NUP54-201ENST00000264883 IMPA2O14732 288 aa12.07□□□□□ -0.48
NUP54-201ENST00000264883 ADH1AP07327 375 aa12.07□□□□□ -0.48
NUP54-201ENST00000264883 NTSP30990 170 aa12.07□□□□□ -0.48
NUP54-201ENST00000264883 GPX4P36969 197 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms