RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 RPLP0P6Q8NHW5 317 aa15.05■□□□□ -0
HOXD3-201ENST00000249440 ZNF671Q8TAW3 534 aa15.05■□□□□ -0
HOXD3-201ENST00000249440 SNAPC3Q92966 411 aa15.05■□□□□ -0
HOXD3-201ENST00000249440 SPACA7Q96KW9 195 aa15.05■□□□□ -0
HOXD3-201ENST00000249440 SMAD5Q99717 465 aaKnown RBP15.05■□□□□ -0
HOXD3-201ENST00000249440 CLEC1BQ9P126 229 aa15.05■□□□□ -0
HOXD3-201ENST00000249440 HCN3Q9P1Z3 774 aa15.05■□□□□ -0
HOXD3-201ENST00000249440 POMT2Q9UKY4 750 aa15.05■□□□□ -0
HOXD3-201ENST00000249440 AK6Q9Y3D8 172 aaKnown RBP15.05■□□□□ -0
HOXD3-201ENST00000249440 TEX13CA0A0J9YWL9 993 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 TCRBV21S2A2A0A5A6 115 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 BLACEA4D250 179 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 SERINC4A6NH21 518 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 CDC123O75794 336 aaPredicted RBP15.04■□□□□ -0
HOXD3-201ENST00000249440 CELA2BP08218 269 aaPredicted RBP15.04■□□□□ -0
HOXD3-201ENST00000249440 GIFP27352 417 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 PRPS1P60891 318 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 DGCR2P98153 550 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 HSF2Q03933 536 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 ISXQ2M1V0 245 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 ZNF595Q8IYB9 648 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 HSPA12BQ96MM6 686 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 DGAT2Q96PD7 388 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 PDCD1LG2Q9BQ51 273 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 CACNG6Q9BXT2 260 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 NCDNQ9UBB6 729 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 RABL2AQ9UBK7 228 aaPredicted RBP15.04■□□□□ -0
HOXD3-201ENST00000249440 RABL2BQ9UNT1 228 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 OR10H1Q9Y4A9 318 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 PIAS3Q9Y6X2 628 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 TDRD6O60522 2096 aaKnown RBP15.04■□□□□ -0
HOXD3-201ENST00000249440 A0A0B4J203 849 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 ANKRD61A6NGH8 418 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 TGFBR3LH3BV60 316 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 CLDN4O14493 209 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 CTDSPLO15194 276 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 CT45A8P0DMV1 189 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 CT45A9P0DMV2 189 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 SPI1P17947 270 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 SRMP19623 302 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 CT45A2Q5DJT8 189 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 CD276Q5ZPR3 534 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 SLC22A10Q63ZE4 541 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 MCATQ8IVS2 390 aaKnown RBP15.04■□□□□ -0
HOXD3-201ENST00000249440 C19orf47Q8N9M1 422 aaKnown RBP15.04■□□□□ -0
HOXD3-201ENST00000249440 OR6K6Q8NGW6 343 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 ADAMTS14Q8WXS8 1223 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 OR2M2Q96R28 347 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 DDOQ99489 341 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 RANBP3Q9H6Z4 567 aaPredicted RBP15.04■□□□□ -0
HOXD3-201ENST00000249440 LRIT1Q9P2V4 623 aa15.04■□□□□ -0
HOXD3-201ENST00000249440 SPTBP11277 2137 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 OR6C68A6NDL8 312 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 GSTZ1O43708 216 aaPredicted RBP15.03■□□□□ -0
HOXD3-201ENST00000249440 SELENOFO60613 162 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 CTSEP14091 401 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 IGFBP4P22692 258 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 LTBRP36941 435 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 GPLD1P80108 840 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 IGLV3-21P80748 117 aaPredicted RBP15.03■□□□□ -0
HOXD3-201ENST00000249440 SRSF5Q13243 272 aaKnown RBP15.03■□□□□ -0
HOXD3-201ENST00000249440 NNATQ16517 81 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 NDUFAF6Q330K2 333 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 RNASE12Q5GAN4 147 aaKnown RBP15.03■□□□□ -0
HOXD3-201ENST00000249440 UBE2NLQ5JXB2 153 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 UNQ9370/PRO34162Q6UXP9 181 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 OR4C3Q8NH37 302 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 ZNRF4Q8WWF5 429 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 SLC19A3Q9BZV2 496 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 S1PR5Q9H228 398 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 EMC7Q9NPA0 242 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 PRTFDC1Q9NRG1 225 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 ZNF222Q9UK12 451 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 COPS3Q9UNS2 423 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 KNL1Q8NG31 2342 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 SRPX2O60687 465 aaPredicted RBP15.03■□□□□ -0
HOXD3-201ENST00000249440 OR7A10O76100 309 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 GABRG2P18507 467 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 GPR3P46089 330 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 RAG2P55895 527 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 SNTB2Q13425 540 aaKnown RBP15.03■□□□□ -0
HOXD3-201ENST00000249440 DYRK1AQ13627 763 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 HTR4Q13639 388 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 IL10RAQ13651 578 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 PRTGQ2VWP7 1150 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 BCORP1Q8N888 145 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 AVL9Q8NBF6 648 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 C16orf52Q8NHV5 167 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 C3orf49Q96BT1 292 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 ZNF578Q96N58 590 aaPredicted RBP15.03■□□□□ -0
HOXD3-201ENST00000249440 NMNAT2Q9BZQ4 307 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 OR51J1Q9H342 316 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 CCDC86Q9H6F5 360 aaKnown RBP15.03■□□□□ -0
HOXD3-201ENST00000249440 MTCH2Q9Y6C9 303 aa15.03■□□□□ -0
HOXD3-201ENST00000249440 MPDZO75970 2070 aa15.02■□□□□ -0
HOXD3-201ENST00000249440 SPTY2D1-AS1A0A0U1RR47 76 aa15.02■□□□□ -0
HOXD3-201ENST00000249440 TRABD2BA6NFA1 517 aa15.02■□□□□ -0
HOXD3-201ENST00000249440 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.02■□□□□ -0
HOXD3-201ENST00000249440 PDCD5O14737 125 aa15.02■□□□□ -0
HOXD3-201ENST00000249440 ANXA3P12429 323 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms