RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 ZNF649Q9BS31 505 aa7.22□□□□□ -1.25
CXCR4-201ENST00000241393 ABCB9Q9NP78 766 aa7.22□□□□□ -1.25
CXCR4-201ENST00000241393 ZNF223Q9UK11 482 aaPredicted RBP7.22□□□□□ -1.25
CXCR4-201ENST00000241393 BAIAP2Q9UQB8 552 aa7.22□□□□□ -1.25
CXCR4-201ENST00000241393 CARD8Q9Y2G2 431 aa7.22□□□□□ -1.25
CXCR4-201ENST00000241393 ATG2AQ2TAZ0 1938 aa7.21□□□□□ -1.25
CXCR4-201ENST00000241393 SNRNP200O75643 2136 aaKnown RBP7.21□□□□□ -1.25
CXCR4-201ENST00000241393 A0A1W2PQ09 198 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 UNC119BA6NIH7 251 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 CCNKO75909 580 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 RCBTB2O95199 551 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 EML2O95834 649 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 UGT2B7P16662 529 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 MAGP20916 626 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 HNRNPA2B1P22626 353 aaKnown RBP7.21□□□□□ -1.26
CXCR4-201ENST00000241393 MAT2AP31153 395 aaKnown RBP7.21□□□□□ -1.26
CXCR4-201ENST00000241393 PTGER1P34995 402 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 DDOSTP39656 456 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 MAP3K8P41279 467 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 ACTR1BP42025 376 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 GPR4P46093 362 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 RFX2P48378 723 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 ACTR1AP61163 376 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 FABP5Q01469 135 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 RUNX2Q13950 521 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 TRAM1Q15629 374 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 BAK1Q16611 211 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 CLEC12AQ5QGZ9 265 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 PDZK1Q5T2W1 519 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 FCRL6Q6DN72 434 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF613Q6PF04 617 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF322Q6U7Q0 402 aaPredicted RBP7.21□□□□□ -1.26
CXCR4-201ENST00000241393 PARM1Q6UWI2 310 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 FAM131AQ6UXB0 335 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 TMPRSS11FQ6ZWK6 438 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 HMGN2P46Q86SG4 172 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 RDH10Q8IZV5 341 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 LNX2Q8N448 690 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 ACBD7Q8N6N7 88 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 OR52L1Q8NGH7 329 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 OR6F1Q8NGZ6 308 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 FGF14Q92915 247 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 SLC35B4Q969S0 331 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 RERGQ96A58 199 aaPredicted RBP7.21□□□□□ -1.26
CXCR4-201ENST00000241393 SIPA1Q96FS4 1042 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 ZC3HAV1LQ96H79 300 aaKnown RBP7.21□□□□□ -1.26
CXCR4-201ENST00000241393 DIRAS2Q96HU8 199 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 C20orf173Q96LM9 149 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 HS6ST2Q96MM7 605 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 SNX18Q96RF0 628 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 CD180Q99467 661 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 PRSS27Q9BQR3 290 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 OR2B2Q9GZK3 357 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 KCNN2Q9H2S1 579 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 UBQLN3Q9H347 655 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 TPK1Q9H3S4 243 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 IL21RQ9HBE5 538 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 POT1Q9NUX5 634 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF221Q9UK13 617 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 SLC7A7Q9UM01 511 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 GPR52Q9Y2T5 361 aa7.21□□□□□ -1.26
CXCR4-201ENST00000241393 DOCK9Q9BZ29 2069 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 HMX3A6NHT5 357 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 C2orf74A8MZ97 194 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 CASKO14936 926 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 SLC19A2O60779 497 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 CTSVO60911 334 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 TMCC2O75069 709 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 NCR1O76036 304 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 LYPD3O95274 346 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 GPR75O95800 540 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 CSF3P09919 207 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 PAICSP22234 425 aaKnown RBP7.2□□□□□ -1.26
CXCR4-201ENST00000241393 AK4P27144 223 aaPredicted RBP7.2□□□□□ -1.26
CXCR4-201ENST00000241393 CTBP2P56545 445 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 BLOC1S1P78537 153 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 MRPS21P82921 87 aaKnown RBP7.2□□□□□ -1.26
CXCR4-201ENST00000241393 MXD1Q05195 221 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 DEFB134Q4QY38 66 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 DCST2Q5T1A1 773 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 GARNL3Q5VVW2 1013 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 RSBN1Q5VWQ0 802 aaPredicted RBP7.2□□□□□ -1.26
CXCR4-201ENST00000241393 NIPAL3Q6P499 406 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 TMEM108Q6UXF1 575 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 MEPCEQ7L2J0 689 aaKnown RBP7.2□□□□□ -1.26
CXCR4-201ENST00000241393 CDK20Q8IZL9 346 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 SLC2A12Q8TD20 617 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 TMEM255BQ8WV15 326 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 TMEM239Q8WW34 195 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 TMEM203Q969S6 136 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF486Q96H40 463 aaPredicted RBP7.2□□□□□ -1.26
CXCR4-201ENST00000241393 BMFQ96LC9 184 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 SAMD8Q96LT4 415 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 LRFN5Q96NI6 719 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 SECISBP2Q96T21 854 aaKnown RBP7.2□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF559Q9BR84 538 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 OR52D1Q9H346 318 aa7.2□□□□□ -1.26
CXCR4-201ENST00000241393 C6orf106Q9H6K1 298 aaPredicted RBP7.2□□□□□ -1.26
CXCR4-201ENST00000241393 HINT3Q9NQE9 182 aaKnown RBP7.2□□□□□ -1.26
CXCR4-201ENST00000241393 LRRC72A6NJI9 287 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms