RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 NRIP3Q9NQ35 241 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 UBQLN4Q9NRR5 601 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 F3P13726 295 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 EDN3P14138 238 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 MAKP20794 623 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 CD6P30203 668 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 SLC7A9P82251 487 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 PRDX1Q06830 199 aaKnown RBP12.44□□□□□ -0.42
NEK4-201ENST00000233027 RBMS2Q15434 407 aaKnown RBP12.44□□□□□ -0.42
NEK4-201ENST00000233027 STK11Q15831 433 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 SIAH3Q8IW03 269 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 LILRA3Q8N6C8 439 aaPredicted RBP12.44□□□□□ -0.42
NEK4-201ENST00000233027 OR2A12Q8NGT7 310 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 OR56B4Q8NH76 319 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 HHATLQ9HCP6 504 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 P2RX6O15547 441 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 DPM1O60762 260 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 ITGB2P05107 769 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 RRAS2P62070 204 aaPredicted RBP12.44□□□□□ -0.42
NEK4-201ENST00000233027 FCN2Q15485 313 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 CCL26Q9Y258 94 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 EFCAB7A8K855 629 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 LCMT2O60294 686 aaKnown RBP12.44□□□□□ -0.42
NEK4-201ENST00000233027 FUCA1P04066 466 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 RAB4AP20338 218 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 GDF1P27539 372 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 ILKQ13418 452 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 TMEM31Q5JXX7 168 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 ABHD17BQ5VST6 288 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 OR9K2Q8NGE7 335 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 RNF128Q8TEB7 428 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 ALG12Q9BV10 488 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 LMAN1LQ9HAT1 526 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 SLC6A14Q9UN76 642 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 OR6C65A6NJZ3 312 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 B4DXG7 233 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 POU3F2P20265 443 aaPredicted RBP12.43□□□□□ -0.42
NEK4-201ENST00000233027 EFNA3P52797 238 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 CCSMST1Q4G0I0 132 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 TXNDC15Q96J42 360 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 SIAEQ9HAT2 523 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 NOX4Q9NPH5 578 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 SEMA4GQ9NTN9 838 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 NPAP1Q9NZP6 1156 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 TCRBV5S1A1TA0A578 114 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 RAP2BP61225 183 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 EBPQ15125 230 aaKnown RBP12.43□□□□□ -0.42
NEK4-201ENST00000233027 DUSP7Q16829 419 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 MPP7Q5T2T1 576 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 TM4SF18Q96CE8 201 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 ARL5BQ96KC2 179 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 SLAMF7Q9NQ25 335 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 TAAR2Q9P1P5 351 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 HHLA1C9JL84 531 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 SIRPAP78324 504 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 MELKQ14680 651 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 SLCO4C1Q6ZQN7 724 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 FAM160A2Q8N612 972 aaPredicted RBP12.43□□□□□ -0.42
NEK4-201ENST00000233027 ZFAND1Q8TCF1 268 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 UBTD2Q8WUN7 234 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 RLN3Q8WXF3 142 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 FGF13Q92913 245 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 TIMM29Q9BSF4 260 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 ULBP3Q9BZM4 244 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 NMNAT2Q9BZQ4 307 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 HAO2Q9NYQ3 351 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 CD207Q9UJ71 328 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 MPPED1O15442 326 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 NXPH3O95157 252 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 IGHG1P01857 330 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 FCGR2AP12318 317 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 MMP12P39900 470 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 HTR3AP46098 478 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 ASB17Q8WXJ9 295 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 GCDHQ92947 438 aaPredicted RBP12.43□□□□□ -0.42
NEK4-201ENST00000233027 VN1R3Q9BXE9 311 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 DIMT1Q9UNQ2 313 aaKnown RBP12.43□□□□□ -0.42
NEK4-201ENST00000233027 TP53TG5Q9Y2B4 290 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 RGPD1P0DJD0 1748 aa12.43□□□□□ -0.42
NEK4-201ENST00000233027 ZNF44P15621 663 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 SFRP5Q5T4F7 317 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 PTRH1Q86Y79 214 aaKnown RBP12.42□□□□□ -0.42
NEK4-201ENST00000233027 LRRC56Q8IYG6 542 aaPredicted RBP12.42□□□□□ -0.42
NEK4-201ENST00000233027 OR5D18Q8NGL1 313 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 SLC35B4Q969S0 331 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 CNTNAP3Q9BZ76 1288 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 RPS10-NUDT3A0A1W2PQS6 291 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 OR2A25A4D2G3 310 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 M0QYG6 137 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 B3GALT4O96024 378 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 OMGP23515 440 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 TACR3P29371 465 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 RPS10P46783 165 aaKnown RBP12.42□□□□□ -0.42
NEK4-201ENST00000233027 PRSS45Q7RTY3 260 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 R3HDMLQ9H3Y0 253 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 GLIPR2Q9H4G4 154 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 RBFOX1Q9NWB1 397 aaKnown RBP12.42□□□□□ -0.42
NEK4-201ENST00000233027 KLK4Q9Y5K2 254 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 HNF4GQ14541 408 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 GDF7Q7Z4P5 450 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms