RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 DNPH1O43598 174 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 AKR7A3O95154 331 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 PTNP21246 168 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 FKBP2P26885 142 aaKnown RBP12.16□□□□□ -0.46
VEGFA-201ENST00000230480 KIR2DL3P43628 341 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 OR3A2P47893 321 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 OR2B6P58173 313 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 PSME3P61289 254 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 LSM11P83369 360 aaKnown RBP eCLIP12.16□□□□□ -0.462e-28■■□□□ 11.6
VEGFA-201ENST00000230480 TLE4Q04727 773 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 RNPS1Q15287 305 aaKnown RBP12.16□□□□□ -0.46
VEGFA-201ENST00000230480 TSC22D1Q15714 1073 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 FXNQ16595 210 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 C1orf140Q5VVS0 124 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 PPP4R4Q6NUP7 873 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 KRT73Q86Y46 540 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 SLC43A2Q8N370 569 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 OR52E4Q8NGH9 312 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 STK35Q8TDR2 534 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 SH3GL1Q99961 368 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 ZNF426Q9BUY5 554 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 EFCAB1Q9HAE3 211 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 MCCC2Q9HCC0 563 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 TIGARQ9NQ88 270 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 B3GAT1Q9P2W7 334 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 CD300AQ9UGN4 299 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 TESMINQ9Y4I5 508 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 SNX13Q9Y5W8 968 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 FLVCR1Q9Y5Y0 555 aa12.16□□□□□ -0.46
VEGFA-201ENST00000230480 PRRC2AP48634 2157 aaKnown RBP12.16□□□□□ -0.46
VEGFA-201ENST00000230480 ELOVL7A1L3X0 281 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 DEFB108AA8MXU0 73 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 PDLIM1O00151 329 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 FMO6PO60774 539 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 BGLAPP02818 100 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 EPXP11678 715 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 CXCR1P25024 350 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 CPOXP36551 454 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 RGS8P57771 180 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-201ENST00000230480 CSNK2A1P68400 391 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-201ENST00000230480 OR7A5Q15622 319 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 IQCCQ4KMZ1 466 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 CYBRD1Q53TN4 286 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 ENTPD8Q5MY95 495 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 ANKRD34AQ69YU3 496 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 PAQR6Q6TCH4 344 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 EPHX4Q8IUS5 362 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 SLC30A8Q8IWU4 369 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 KDM8Q8N371 416 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 RBM15BQ8NDT2 890 aaKnown RBP12.15□□□□□ -0.46
VEGFA-201ENST00000230480 OR2T12Q8NG77 320 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 VANGL1Q8TAA9 524 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-201ENST00000230480 FAM222BQ8WU58 562 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 DDIT4LQ96D03 193 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 SLC41A3Q96GZ6 507 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 LURAP1Q96LR2 239 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 ZNF385AQ96PM9 386 aaKnown RBP12.15□□□□□ -0.46
VEGFA-201ENST00000230480 MCHR1Q99705 422 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 HOPXQ9BPY8 73 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-201ENST00000230480 ZNF559Q9BR84 538 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 TRIM2Q9C040 744 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 LIME1Q9H400 295 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 ELOVL5Q9NYP7 299 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 TESQ9UGI8 421 aaKnown RBP12.15□□□□□ -0.46
VEGFA-201ENST00000230480 EMC9Q9Y3B6 208 aa12.15□□□□□ -0.46
VEGFA-201ENST00000230480 MAP1AP78559 2803 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-201ENST00000230480 AQP7P3A6NL99 342 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 MS4A18H0YCH9 400 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 FFAR1O14842 300 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 KLF4O43474 513 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 AHCYL1O43865 530 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 HPRP00739 348 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 SSTR2P30874 369 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 IDUAP35475 653 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 OR1E2P47887 323 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 NUDT2P50583 147 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 CTBP2P56545 445 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 NCALDP61601 193 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 COPZ1P61923 177 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 SLC35A1P78382 337 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 SLC25A3Q00325 362 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 BLMHQ13867 455 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 MS4A18Q3C1V0 323 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 ALG10BQ5I7T1 473 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 ERICH5Q6P6B1 374 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 ULK3Q6PHR2 472 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 LINGO2Q7L985 606 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 GDF7Q7Z4P5 450 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 VTCN1Q7Z7D3 282 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 BHLHE22Q8NFJ8 381 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-201ENST00000230480 MFSD8Q8NHS3 518 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 MOGAT1Q96PD6 335 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 ARMC7Q9H6L4 198 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 MEPEQ9NQ76 525 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-201ENST00000230480 RASSF1Q9NS23 344 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 KLHL9Q9P2J3 617 aa12.14□□□□□ -0.47
VEGFA-201ENST00000230480 SPIN1Q9Y657 262 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-201ENST00000230480 TUBAL3A6NHL2 446 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 CPSF4LA6NMK7 179 aaKnown RBP12.13□□□□□ -0.47
VEGFA-201ENST00000230480 A6NNC1 897 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms