RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 TSPY26PQ9H489 355 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 SAMM50Q9Y512 469 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 DIP2BQ9P265 1576 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 NOM1Q5C9Z4 860 aaKnown RBP10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 PRAG1Q86YV5 1406 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 CBFA2T2O43439 604 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 BIRC2Q13490 618 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 C8orf76Q96K31 380 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 PTPRKQ15262 1439 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 NCBP1Q09161 790 aaKnown RBP10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 UBA5Q9GZZ9 404 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 ACBD3Q9H3P7 528 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 POLKQ9UBT6 870 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 IQSEC3Q9UPP2 1182 aaPredicted RBP10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 SLC4A4Q9Y6R1 1079 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 ECM2O94769 699 aaPredicted RBP10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 CCDC82Q8N4S0 544 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 NCOA7Q8NI08 942 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 EYA1Q99502 592 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 KRT23Q9C075 422 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 RSPH6AQ9H0K4 717 aa10.84□□□□□ -0.67
CACNA1D-230ENST00000640483 MAST1Q9Y2H9 1570 aa10.83□□□□□ -0.68
CACNA1D-230ENST00000640483 LIG1P18858 919 aa10.83□□□□□ -0.68
CACNA1D-230ENST00000640483 PDE6BP35913 854 aa10.83□□□□□ -0.68
CACNA1D-230ENST00000640483 CCDC192P0DO97 292 aa10.83□□□□□ -0.68
CACNA1D-230ENST00000640483 PLS1Q14651 629 aa10.83□□□□□ -0.68
CACNA1D-230ENST00000640483 SH2B1Q9NRF2 756 aaPredicted RBP10.83□□□□□ -0.68
CACNA1D-230ENST00000640483 STX8Q9UNK0 236 aa10.83□□□□□ -0.68
CACNA1D-230ENST00000640483 UQCRHP07919 91 aa10.83□□□□□ -0.68
CACNA1D-230ENST00000640483 HMGN5P82970 282 aaKnown RBP10.83□□□□□ -0.68
CACNA1D-230ENST00000640483 GSE1Q14687 1217 aa10.83□□□□□ -0.68
CACNA1D-230ENST00000640483 QTRT2Q9H974 415 aaKnown RBP10.83□□□□□ -0.68
CACNA1D-230ENST00000640483 KDM5DQ9BY66 1539 aa10.83□□□□□ -0.68
CACNA1D-230ENST00000640483 PIK3C2GO75747 1445 aa10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 MAGEB6P1A0A0J9YX57 407 aa10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 LDHBP07195 334 aaKnown RBP10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 STXBP4Q6ZWJ1 553 aa10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 GPHNQ9NQX3 736 aaPredicted RBP10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 CAVIN1Q6NZI2 390 aaKnown RBP10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 UFL1O94874 794 aa10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 TRIM27P14373 513 aa10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 LARGE2Q8N3Y3 721 aa10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 CALML4Q96GE6 196 aa10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 CNNM2Q9H8M5 875 aa10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 SBNO1A3KN83 1393 aa10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 PRIM1P49642 420 aaKnown RBP10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 GRIPAP1Q4V328 841 aa10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 ARHGAP27Q6ZUM4 889 aa10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 ESR2Q92731 530 aa10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 SH2D4AQ9H788 454 aa10.82□□□□□ -0.68
CACNA1D-230ENST00000640483 MAP3K19Q56UN5 1328 aa10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 CCDC83Q8IWF9 413 aa10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 ERLIN2O94905 339 aa10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 LINS1Q8NG48 757 aa10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 PICK1Q9NRD5 415 aa10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 ARGLU1Q9NWB6 273 aaPredicted RBP10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 MAST3O60307 1309 aa10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 GGA1Q9UJY5 639 aa10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 IVNS1ABPQ9Y6Y0 642 aa10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 FGFR1OPO95684 399 aaKnown RBP10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 CKAP2LQ8IYA6 745 aa10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 ARHGAP45Q92619 1136 aa10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 PLEKHH1Q9ULM0 1364 aa10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 CDC42BPAQ5VT25 1732 aa10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 PLXNC1O60486 1568 aa10.81□□□□□ -0.68
CACNA1D-230ENST00000640483 GNAT2P19087 354 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 IARSP41252 1262 aaKnown RBP10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 DDX17Q92841 729 aaKnown RBP10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 HMG20BQ9P0W2 317 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 GNAQP50148 359 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 EIF5P55010 431 aaKnown RBP10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 ZRSR2Q15696 482 aaKnown RBP10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 TTC16Q8NEE8 873 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 TCP11L1Q9NUJ3 509 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 A0A1W2PP64 1363 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 SOS1Q07889 1333 aaPredicted RBP10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 NPHP4O75161 1426 aaPredicted RBP10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 ALDH1B1P30837 517 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 WTAPQ15007 396 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 CCDC184Q52MB2 194 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 DPP8Q6V1X1 898 aaPredicted RBP10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 TMTC2Q8N394 836 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 RNF214Q8ND24 703 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 EDC4Q6P2E9 1401 aaKnown RBP10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 IFIT1BQ5T764 474 aaKnown RBP10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 NIM1KQ8IY84 436 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 RHPN1Q8TCX5 695 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 TMOD4Q9NZQ9 345 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 UQCRHLA0A096LP55 91 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 SMTNL1A8MU46 457 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 SSR1P43307 286 aaKnown RBP10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 METAP2P50579 478 aaKnown RBP eCLIP10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 HAND2P61296 217 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 AMPD3Q01432 767 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 ERMNQ8TAM6 284 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 DENND2AQ9ULE3 1009 aa10.8□□□□□ -0.68
CACNA1D-230ENST00000640483 COL17A1Q9UMD9 1497 aaPredicted RBP10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 CETN2P41208 172 aa10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 HSP90AA2PQ14568 343 aaPredicted RBP10.79□□□□□ -0.68
CACNA1D-230ENST00000640483 ZNF397Q8NF99 534 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms