RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	HSP90B1	P14625	803 aa	Known RBP	19.03	■□□□□ 0.64
TARDBP-231	ENST00000639599	VEGFB	P49765	207 aa		19.03	■□□□□ 0.64
TARDBP-231	ENST00000639599	TNIP1	Q15025	636 aa		19.03	■□□□□ 0.64
TARDBP-231	ENST00000639599	CIAPIN1	Q6FI81	312 aa		19.03	■□□□□ 0.64
TARDBP-231	ENST00000639599	ADARB2	Q9NS39	739 aa	Known RBP	19.03	■□□□□ 0.64
TARDBP-231	ENST00000639599	RIC3	Q7Z5B4	369 aa		19.02	■□□□□ 0.64
TARDBP-231	ENST00000639599	RTFDC1	Q9BY42	306 aa	Predicted RBP	19.02	■□□□□ 0.64
TARDBP-231	ENST00000639599	CHMP4A	Q9BY43	222 aa		19.02	■□□□□ 0.64
TARDBP-231	ENST00000639599	ATP5J2-PTCD1	G3V325	749 aa		19.01	■□□□□ 0.63
TARDBP-231	ENST00000639599	CTCF	P49711	727 aa	Predicted RBP	19.01	■□□□□ 0.63
TARDBP-231	ENST00000639599	GNAI1	P63096	354 aa		19.01	■□□□□ 0.63
TARDBP-231	ENST00000639599	KIAA2012	Q0VF49	1180 aa		19.01	■□□□□ 0.63
TARDBP-231	ENST00000639599	GRM1	Q13255	1194 aa		19.01	■□□□□ 0.63
TARDBP-231	ENST00000639599	SLC51A	Q86UW1	340 aa		19.01	■□□□□ 0.63
TARDBP-231	ENST00000639599	ECE1	P42892	770 aa		19	■□□□□ 0.63
TARDBP-231	ENST00000639599	CXCL9	Q07325	125 aa		19	■□□□□ 0.63
TARDBP-231	ENST00000639599	RTL5	Q5HYW3	569 aa	Predicted RBP	19	■□□□□ 0.63
TARDBP-231	ENST00000639599	FAM89A	Q96GI7	184 aa		19	■□□□□ 0.63
TARDBP-231	ENST00000639599	BEGAIN	Q9BUH8	593 aa		19	■□□□□ 0.63
TARDBP-231	ENST00000639599	PRKRIP1	Q9H875	184 aa	Predicted RBP	19	■□□□□ 0.63
TARDBP-231	ENST00000639599	MBIP	Q9NS73	344 aa		19	■□□□□ 0.63
TARDBP-231	ENST00000639599	GPRC5D	Q9NZD1	345 aa		19	■□□□□ 0.63
TARDBP-231	ENST00000639599	RASSF10	A6NK89	507 aa		18.99	■□□□□ 0.63
TARDBP-231	ENST00000639599	FOXN1	O15353	648 aa		18.99	■□□□□ 0.63
TARDBP-231	ENST00000639599	RAD17	O75943	681 aa		18.99	■□□□□ 0.63
TARDBP-231	ENST00000639599	GMPS	P49915	693 aa	Predicted RBP	18.99	■□□□□ 0.63
TARDBP-231	ENST00000639599	MAP2K1	Q02750	393 aa	Predicted RBP	18.99	■□□□□ 0.63
TARDBP-231	ENST00000639599	IFT57	Q9NWB7	429 aa		18.99	■□□□□ 0.63
TARDBP-231	ENST00000639599	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.99	■□□□□ 0.63
TARDBP-231	ENST00000639599	CDHR2	Q9BYE9	1310 aa		18.99	■□□□□ 0.63
TARDBP-231	ENST00000639599	COL4A5	P29400	1685 aa		18.98	■□□□□ 0.63
TARDBP-231	ENST00000639599		G3V3G9	751 aa		18.98	■□□□□ 0.63
TARDBP-231	ENST00000639599	C6orf229	H3BNL8	230 aa		18.98	■□□□□ 0.63
TARDBP-231	ENST00000639599	APAF1	O14727	1248 aa		18.98	■□□□□ 0.63
TARDBP-231	ENST00000639599	DCAF8	Q5TAQ9	597 aa		18.98	■□□□□ 0.63
TARDBP-231	ENST00000639599	EYA3	Q99504	573 aa		18.98	■□□□□ 0.63
TARDBP-231	ENST00000639599	ISCA1	Q9BUE6	129 aa		18.98	■□□□□ 0.63
TARDBP-231	ENST00000639599	WDR33	Q9C0J8	1336 aa	Known RBP	18.98	■□□□□ 0.63
TARDBP-231	ENST00000639599		H7C1D1	291 aa		18.97	■□□□□ 0.63
TARDBP-231	ENST00000639599	ELL2	O00472	640 aa	Predicted RBP	18.97	■□□□□ 0.63
TARDBP-231	ENST00000639599	IRS4	O14654	1257 aa	Predicted RBP	18.97	■□□□□ 0.63
TARDBP-231	ENST00000639599	DDX58	O95786	925 aa	Known RBP	18.97	■□□□□ 0.63
TARDBP-231	ENST00000639599	WASHC4	Q2M389	1173 aa		18.97	■□□□□ 0.63
TARDBP-231	ENST00000639599	PRDM10	Q9NQV6	1147 aa		18.96	■□□□□ 0.63
TARDBP-231	ENST00000639599	SF3B3	Q15393	1217 aa	Known RBP	18.95	■□□□□ 0.62
TARDBP-231	ENST00000639599	MYD88	Q99836	296 aa		18.95	■□□□□ 0.62
TARDBP-231	ENST00000639599	ZNF408	Q9H9D4	720 aa		18.95	■□□□□ 0.62
TARDBP-231	ENST00000639599	ADAMTSL1	Q8N6G6	1762 aa		18.95	■□□□□ 0.62
TARDBP-231	ENST00000639599	ANKRD36C	Q5JPF3	1778 aa		18.94	■□□□□ 0.62
TARDBP-231	ENST00000639599	TRAF5	O00463	557 aa		18.94	■□□□□ 0.62
TARDBP-231	ENST00000639599	RIMBP2	O15034	1052 aa		18.94	■□□□□ 0.62
TARDBP-231	ENST00000639599	CELF2	O95319	508 aa	Known RBP	18.94	■□□□□ 0.62
TARDBP-231	ENST00000639599	CCDC30	Q5VVM6	783 aa		18.94	■□□□□ 0.62
TARDBP-231	ENST00000639599	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.94	■□□□□ 0.62
TARDBP-231	ENST00000639599	CELF1	Q92879	486 aa	Known RBP	18.94	■□□□□ 0.62
TARDBP-231	ENST00000639599	CAPNS2	Q96L46	248 aa		18.94	■□□□□ 0.62
TARDBP-231	ENST00000639599	WBP1L	Q9NX94	342 aa		18.94	■□□□□ 0.62
TARDBP-231	ENST00000639599	TRIM28	Q13263	835 aa	Known RBP	18.93	■□□□□ 0.62
TARDBP-231	ENST00000639599	DBNDD1	Q9H9R9	158 aa		18.93	■□□□□ 0.62
TARDBP-231	ENST00000639599	ANKIB1	Q9P2G1	1089 aa		18.93	■□□□□ 0.62
TARDBP-231	ENST00000639599	CNOT7	Q9UIV1	285 aa	Known RBP	18.93	■□□□□ 0.62
TARDBP-231	ENST00000639599	LBX1	P52954	281 aa		18.92	■□□□□ 0.62
TARDBP-231	ENST00000639599	RPS8	P62241	208 aa	Known RBP	18.92	■□□□□ 0.62
TARDBP-231	ENST00000639599	CCDC152	Q4G0S7	254 aa		18.92	■□□□□ 0.62
TARDBP-231	ENST00000639599	MICALL2	Q8IY33	904 aa		18.92	■□□□□ 0.62
TARDBP-231	ENST00000639599	ZC3H15	Q8WU90	426 aa	Known RBP	18.92	■□□□□ 0.62
TARDBP-231	ENST00000639599	STK31	Q9BXU1	1019 aa		18.92	■□□□□ 0.62
TARDBP-231	ENST00000639599	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.92	■□□□□ 0.62
TARDBP-231	ENST00000639599	ZNF853	P0CG23	659 aa		18.91	■□□□□ 0.62
TARDBP-231	ENST00000639599	GPSM2	P81274	684 aa		18.91	■□□□□ 0.62
TARDBP-231	ENST00000639599	FMR1	Q06787	632 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
TARDBP-231	ENST00000639599	CYP4F22	Q6NT55	531 aa		18.91	■□□□□ 0.62
TARDBP-231	ENST00000639599	CDC37L1	Q7L3B6	337 aa		18.91	■□□□□ 0.62
TARDBP-231	ENST00000639599	CCDC191	Q8NCU4	936 aa		18.91	■□□□□ 0.62
TARDBP-231	ENST00000639599	GPR101	Q96P66	508 aa	Predicted RBP	18.91	■□□□□ 0.62
TARDBP-231	ENST00000639599	GLIS2	Q9BZE0	524 aa	Predicted RBP	18.91	■□□□□ 0.62
TARDBP-231	ENST00000639599	PHAX	Q9H814	394 aa	Known RBP	18.91	■□□□□ 0.62
TARDBP-231	ENST00000639599	CWC25	Q9NXE8	425 aa	Predicted RBP	18.91	■□□□□ 0.62
TARDBP-231	ENST00000639599	TLL2	Q9Y6L7	1015 aa		18.91	■□□□□ 0.62
TARDBP-231	ENST00000639599	LTBP1	Q14766	1721 aa		18.91	■□□□□ 0.62
TARDBP-231	ENST00000639599	ECE2	O60344	883 aa		18.9	■□□□□ 0.62
TARDBP-231	ENST00000639599	NEXN	Q0ZGT2	675 aa		18.9	■□□□□ 0.62
TARDBP-231	ENST00000639599	YDJC	A8MPS7	323 aa		18.89	■□□□□ 0.61
TARDBP-231	ENST00000639599	PSMD14	O00487	310 aa		18.89	■□□□□ 0.61
TARDBP-231	ENST00000639599	UFL1	O94874	794 aa		18.89	■□□□□ 0.61
TARDBP-231	ENST00000639599	RPS12	P25398	132 aa	Known RBP	18.89	■□□□□ 0.61
TARDBP-231	ENST00000639599	DOK7	Q18PE1	504 aa		18.89	■□□□□ 0.61
TARDBP-231	ENST00000639599	TRPM4	Q8TD43	1214 aa		18.89	■□□□□ 0.61
TARDBP-231	ENST00000639599	DPF2	Q92785	391 aa		18.89	■□□□□ 0.61
TARDBP-231	ENST00000639599	GGA1	Q9UJY5	639 aa		18.89	■□□□□ 0.61
TARDBP-231	ENST00000639599	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.89	■□□□□ 0.61
TARDBP-231	ENST00000639599	PDE8A	O60658	829 aa		18.88	■□□□□ 0.61
TARDBP-231	ENST00000639599	PCCA	P05165	728 aa	Predicted RBP	18.88	■□□□□ 0.61
TARDBP-231	ENST00000639599	CST9	Q5W186	159 aa		18.88	■□□□□ 0.61
TARDBP-231	ENST00000639599	ANKRD18A	Q8IVF6	992 aa		18.88	■□□□□ 0.61
TARDBP-231	ENST00000639599	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.88	■□□□□ 0.61
TARDBP-231	ENST00000639599	POLL	Q9UGP5	575 aa		18.88	■□□□□ 0.61
TARDBP-231	ENST00000639599	HSPA8	P11142	646 aa	Known RBP	18.87	■□□□□ 0.61
TARDBP-231	ENST00000639599	RBM26	Q5T8P6	1007 aa	Known RBP	18.87	■□□□□ 0.61
TARDBP-231	ENST00000639599	C8orf58	Q8NAV2	365 aa		18.87	■□□□□ 0.61

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