RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 ARL10Q8N8L6 244 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 MMTAG2Q9BU76 263 aaKnown RBP10.79□□□□□ -0.68
USB1-216ENST00000624720 FAM135BQ49AJ0 1406 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 ZNF521Q96K83 1311 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.79□□□□□ -0.68
USB1-216ENST00000624720 APBB1O00213 710 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 PDCD2Q16342 344 aaPredicted RBP10.79□□□□□ -0.68
USB1-216ENST00000624720 TXLNBQ8N3L3 684 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 KIF18AQ8NI77 898 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 MIEF2Q96C03 454 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 IQCGQ9H095 443 aaKnown RBP10.79□□□□□ -0.68
USB1-216ENST00000624720 TSPYL2Q9H2G4 693 aaPredicted RBP10.79□□□□□ -0.68
USB1-216ENST00000624720 ARHGEF10LQ9HCE6 1279 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 IQSEC3Q9UPP2 1182 aaPredicted RBP10.79□□□□□ -0.68
USB1-216ENST00000624720 TRIM35Q9UPQ4 493 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 CDKL5O76039 1030 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 RPS6KA3P51812 740 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 SKOR2Q2VWA4 1001 aaPredicted RBP10.79□□□□□ -0.68
USB1-216ENST00000624720 SRLQ86TD4 932 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 TDRD7Q8NHU6 1098 aaKnown RBP10.79□□□□□ -0.68
USB1-216ENST00000624720 CCDC34Q96HJ3 373 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 DIAPH3Q9NSV4 1193 aa10.79□□□□□ -0.68
USB1-216ENST00000624720 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.79□□□□□ -0.68
USB1-216ENST00000624720 EDC4Q6P2E9 1401 aaKnown RBP10.78□□□□□ -0.68
USB1-216ENST00000624720 NPHP4O75161 1426 aaPredicted RBP10.78□□□□□ -0.68
USB1-216ENST00000624720 IL13P35225 146 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 MAGEA9P43362 315 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 CPSF1Q10570 1443 aaKnown RBP10.78□□□□□ -0.68
USB1-216ENST00000624720 MCM6Q14566 821 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 ANKRD13AQ8IZ07 590 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 LRRC59Q96AG4 307 aaKnown RBP10.78□□□□□ -0.68
USB1-216ENST00000624720 PLEKHF1Q96S99 279 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 YIPF2Q9BWQ6 316 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 PICK1Q9NRD5 415 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 PUF60Q9UHX1 559 aaKnown RBP10.78□□□□□ -0.68
USB1-216ENST00000624720 PLEKHG3A1L390 1219 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 CTIFO43310 598 aaKnown RBP10.78□□□□□ -0.68
USB1-216ENST00000624720 NAT2P11245 290 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 FLT3P36888 993 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 RABEP1Q15276 862 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 E2F5Q15329 346 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 MMS22LQ6ZRQ5 1243 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 CCDC191Q8NCU4 936 aa10.78□□□□□ -0.68
USB1-216ENST00000624720 NSD2O96028 1365 aa10.77□□□□□ -0.68
USB1-216ENST00000624720 FBXO41Q8TF61 875 aa10.77□□□□□ -0.69
USB1-216ENST00000624720 C17orf50Q8WW18 174 aa10.77□□□□□ -0.69
USB1-216ENST00000624720 TACO1Q9BSH4 297 aaKnown RBP10.77□□□□□ -0.69
USB1-216ENST00000624720 CRACR2AQ9BSW2 395 aa10.77□□□□□ -0.69
USB1-216ENST00000624720 EXOC5O00471 708 aa10.77□□□□□ -0.69
USB1-216ENST00000624720 NPM3O75607 178 aaKnown RBP10.77□□□□□ -0.69
USB1-216ENST00000624720 FCHSD2O94868 740 aa10.77□□□□□ -0.69
USB1-216ENST00000624720 ATF3P18847 181 aa10.77□□□□□ -0.69
USB1-216ENST00000624720 TBC1D8BQ0IIM8 1120 aa10.77□□□□□ -0.69
USB1-216ENST00000624720 RBBP5Q15291 538 aaKnown RBP10.77□□□□□ -0.69
USB1-216ENST00000624720 HHATQ5VTY9 493 aa10.77□□□□□ -0.69
USB1-216ENST00000624720 TAX1BP1Q86VP1 789 aa10.77□□□□□ -0.69
USB1-216ENST00000624720 RWDD1Q9H446 243 aaPredicted RBP10.77□□□□□ -0.69
USB1-216ENST00000624720 RRP15Q9Y3B9 282 aaKnown RBP10.77□□□□□ -0.69
USB1-216ENST00000624720 USP6P35125 1406 aa10.77□□□□□ -0.69
USB1-216ENST00000624720 IMPDH2P12268 514 aa10.76□□□□□ -0.69
USB1-216ENST00000624720 TTC30AQ86WT1 665 aa10.76□□□□□ -0.69
USB1-216ENST00000624720 DRAXINQ8NBI3 349 aaPredicted RBP10.76□□□□□ -0.69
USB1-216ENST00000624720 SNRNP27Q8WVK2 155 aaKnown RBP10.76□□□□□ -0.69
USB1-216ENST00000624720 IRF2BPLQ9H1B7 796 aa10.76□□□□□ -0.69
USB1-216ENST00000624720 CHMP5Q9NZZ3 219 aa10.76□□□□□ -0.69
USB1-216ENST00000624720 ZNF335Q9H4Z2 1342 aaPredicted RBP10.76□□□□□ -0.69
USB1-216ENST00000624720 SETD1AO15047 1707 aaKnown RBP10.76□□□□□ -0.69
USB1-216ENST00000624720 CHRNA2Q15822 529 aa10.76□□□□□ -0.69
USB1-216ENST00000624720 INF2Q27J81 1249 aa10.76□□□□□ -0.69
USB1-216ENST00000624720 HSP90B2PQ58FF3 399 aa10.76□□□□□ -0.69
USB1-216ENST00000624720 CCDC178Q5BJE1 867 aa10.76□□□□□ -0.69
USB1-216ENST00000624720 RNF214Q8ND24 703 aa10.76□□□□□ -0.69
USB1-216ENST00000624720 AGAP3Q96P47 875 aa10.76□□□□□ -0.69
USB1-216ENST00000624720 TECPR2O15040 1411 aa10.76□□□□□ -0.69
USB1-216ENST00000624720 CDC37L1Q7L3B6 337 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 TSPYL6Q8N831 410 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 SPATS2LQ9NUQ6 558 aaKnown RBP10.75□□□□□ -0.69
USB1-216ENST00000624720 UTP6Q9NYH9 597 aaKnown RBP10.75□□□□□ -0.69
USB1-216ENST00000624720 ABCF2Q9UG63 623 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 DLC1Q96QB1 1528 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 SHTN1A0MZ66 631 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 C21orf2O43822 256 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 ALDH1B1P30837 517 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 SLC5A9Q2M3M2 681 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 CCDC186Q7Z3E2 898 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 IQCF2Q8IXL9 164 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 EFCAB13Q8IY85 973 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 GPT2Q8TD30 523 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 RLBP1P12271 317 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 PEX19P40855 299 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 RABL2BQ9UNT1 228 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 PLEKHG2Q9H7P9 1386 aa10.75□□□□□ -0.69
USB1-216ENST00000624720 TMEM94Q12767 1356 aa10.74□□□□□ -0.69
USB1-216ENST00000624720 AP1G2O75843 785 aa10.74□□□□□ -0.69
USB1-216ENST00000624720 PSMC1P62191 440 aaKnown RBP10.74□□□□□ -0.69
USB1-216ENST00000624720 SYCP1Q15431 976 aa10.74□□□□□ -0.69
USB1-216ENST00000624720 ELOA2Q8IYF1 753 aaPredicted RBP10.74□□□□□ -0.69
USB1-216ENST00000624720 SMCR8Q8TEV9 937 aaPredicted RBP10.74□□□□□ -0.69
USB1-216ENST00000624720 ZNF483Q8TF39 744 aaPredicted RBP10.74□□□□□ -0.69
USB1-216ENST00000624720 EYA1Q99502 592 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms