RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 NRAPQ86VF7 1730 aa13.73□□□□□ -0.21
PCDHGA9-202ENST00000616887 DTNBO60941 627 aa13.73□□□□□ -0.21
PCDHGA9-202ENST00000616887 CPA1P15085 419 aa13.73□□□□□ -0.21
PCDHGA9-202ENST00000616887 NCLP19338 710 aaKnown RBP13.73□□□□□ -0.21
PCDHGA9-202ENST00000616887 PTH1RQ03431 593 aa13.73□□□□□ -0.21
PCDHGA9-202ENST00000616887 SYTL4Q96C24 671 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA9-202ENST00000616887 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
PCDHGA9-202ENST00000616887 AFDNP55196 1824 aaKnown RBP13.73□□□□□ -0.21
PCDHGA9-202ENST00000616887 RAD50Q92878 1312 aa13.73□□□□□ -0.21
PCDHGA9-202ENST00000616887 TMX3Q96JJ7 454 aa13.73□□□□□ -0.21
PCDHGA9-202ENST00000616887 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA9-202ENST00000616887 HSPA4P34932 840 aa13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 COL9A3Q14050 684 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 RABL6Q3YEC7 729 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 FOXD4L5Q5VV16 416 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 FOXD4L4Q8WXT5 416 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 CCDC85AQ96PX6 553 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 DIAPH3Q9NSV4 1193 aa13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 ATG3Q9NT62 314 aa13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 DBNLQ9UJU6 430 aaKnown RBP13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 PAPPAQ13219 1627 aa13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 MCCP23508 829 aa13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 FOXO4P98177 505 aa13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 SLC4A9Q96Q91 983 aa13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 CDCA7Q9BWT1 371 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA9-202ENST00000616887 KAT6BQ8WYB5 2073 aa13.71□□□□□ -0.21
PCDHGA9-202ENST00000616887 GPATCH3Q96I76 525 aa13.71□□□□□ -0.21
PCDHGA9-202ENST00000616887 ZNF594Q96JF6 807 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA9-202ENST00000616887 COPRSQ9NQ92 184 aa13.71□□□□□ -0.21
PCDHGA9-202ENST00000616887 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.71□□□□□ -0.22
PCDHGA9-202ENST00000616887 A0A0G2JS52 829 aa13.71□□□□□ -0.22
PCDHGA9-202ENST00000616887 HS1BP3Q53T59 392 aa13.71□□□□□ -0.22
PCDHGA9-202ENST00000616887 RGS17Q9UGC6 210 aaPredicted RBP13.71□□□□□ -0.22
PCDHGA9-202ENST00000616887 THRAP3Q9Y2W1 955 aaKnown RBP13.71□□□□□ -0.22
PCDHGA9-202ENST00000616887 SNX14Q9Y5W7 946 aa13.71□□□□□ -0.22
PCDHGA9-202ENST00000616887 DDX49Q9Y6V7 483 aaKnown RBP13.71□□□□□ -0.22
PCDHGA9-202ENST00000616887 CBX1P83916 185 aa13.7□□□□□ -0.22
PCDHGA9-202ENST00000616887 TNNI3KQ59H18 835 aa13.7□□□□□ -0.22
PCDHGA9-202ENST00000616887 SASS6Q6UVJ0 657 aa13.7□□□□□ -0.22
PCDHGA9-202ENST00000616887 SYNE4Q8N205 404 aa13.7□□□□□ -0.22
PCDHGA9-202ENST00000616887 DBNDD2Q9BQY9 259 aa13.7□□□□□ -0.22
PCDHGA9-202ENST00000616887 CWC25Q9NXE8 425 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA9-202ENST00000616887 FPGT-TNNI3KV9GXZ4 949 aa13.7□□□□□ -0.22
PCDHGA9-202ENST00000616887 A0A0D9SFI3 127 aa13.7□□□□□ -0.22
PCDHGA9-202ENST00000616887 H7C1W4 665 aa13.7□□□□□ -0.22
PCDHGA9-202ENST00000616887 NMIQ13287 307 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA9-202ENST00000616887 PTMSP20962 102 aa13.69□□□□□ -0.22
PCDHGA9-202ENST00000616887 CSPP1Q1MSJ5 1256 aa13.69□□□□□ -0.22
PCDHGA9-202ENST00000616887 ZNF772Q68DY9 489 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA9-202ENST00000616887 ZDHHC9Q9Y397 364 aa13.69□□□□□ -0.22
PCDHGA9-202ENST00000616887 DISP2A7MBM2 1401 aa13.69□□□□□ -0.22
PCDHGA9-202ENST00000616887 ANAPC15P60006 121 aa13.69□□□□□ -0.22
PCDHGA9-202ENST00000616887 ADCK5Q3MIX3 580 aa13.69□□□□□ -0.22
PCDHGA9-202ENST00000616887 LRRC24Q50LG9 513 aa13.69□□□□□ -0.22
PCDHGA9-202ENST00000616887 EVI5LQ96CN4 794 aa13.69□□□□□ -0.22
PCDHGA9-202ENST00000616887 FSD1Q9BTV5 496 aa13.69□□□□□ -0.22
PCDHGA9-202ENST00000616887 SLFNL1Q499Z3 407 aa13.68□□□□□ -0.22
PCDHGA9-202ENST00000616887 PRPF40BQ6NWY9 871 aaKnown RBP13.68□□□□□ -0.22
PCDHGA9-202ENST00000616887 QTRT2Q9H974 415 aaKnown RBP13.68□□□□□ -0.22
PCDHGA9-202ENST00000616887 ZKSCAN5Q9Y2L8 839 aa13.68□□□□□ -0.22
PCDHGA9-202ENST00000616887 NUP188Q5SRE5 1749 aa13.68□□□□□ -0.22
PCDHGA9-202ENST00000616887 TJP1Q07157 1748 aa13.68□□□□□ -0.22
PCDHGA9-202ENST00000616887 CYP2E1P05181 493 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA9-202ENST00000616887 ZNF589Q86UQ0 364 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA9-202ENST00000616887 FAM89AQ96GI7 184 aa13.68□□□□□ -0.22
PCDHGA9-202ENST00000616887 PUS3Q9BZE2 481 aaKnown RBP13.68□□□□□ -0.22
PCDHGA9-202ENST00000616887 TRPC5Q9UL62 973 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA9-202ENST00000616887 TAF6LQ9Y6J9 622 aa13.68□□□□□ -0.22
PCDHGA9-202ENST00000616887 BAG4O95429 457 aaKnown RBP13.67□□□□□ -0.22
PCDHGA9-202ENST00000616887 GPTP24298 496 aa13.67□□□□□ -0.22
PCDHGA9-202ENST00000616887 VPS72Q15906 364 aa13.67□□□□□ -0.22
PCDHGA9-202ENST00000616887 HLFQ16534 295 aa13.67□□□□□ -0.22
PCDHGA9-202ENST00000616887 ATG9AQ7Z3C6 839 aa13.67□□□□□ -0.22
PCDHGA9-202ENST00000616887 DNAJC2Q99543 621 aaKnown RBP13.67□□□□□ -0.22
PCDHGA9-202ENST00000616887 ATRNO75882 1429 aa13.67□□□□□ -0.22
PCDHGA9-202ENST00000616887 GOLGA6L22H0YM25 854 aa13.67□□□□□ -0.22
PCDHGA9-202ENST00000616887 TSC1Q92574 1164 aa13.67□□□□□ -0.22
PCDHGA9-202ENST00000616887 GTPBP4Q9BZE4 634 aaKnown RBP13.67□□□□□ -0.22
PCDHGA9-202ENST00000616887 ZBTB1Q9Y2K1 713 aa13.67□□□□□ -0.22
PCDHGA9-202ENST00000616887 KIF20AO95235 890 aa13.66□□□□□ -0.22
PCDHGA9-202ENST00000616887 PRIM1P49642 420 aaKnown RBP13.66□□□□□ -0.22
PCDHGA9-202ENST00000616887 TIMM10P62072 90 aa13.66□□□□□ -0.22
PCDHGA9-202ENST00000616887 KLHL40Q2TBA0 621 aa13.66□□□□□ -0.22
PCDHGA9-202ENST00000616887 RBSNQ9H1K0 784 aa13.66□□□□□ -0.22
PCDHGA9-202ENST00000616887 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
PCDHGA9-202ENST00000616887 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
PCDHGA9-202ENST00000616887 POTEAQ6S8J7 498 aa13.66□□□□□ -0.22
PCDHGA9-202ENST00000616887 DDX46Q7L014 1031 aaKnown RBP13.66□□□□□ -0.22
PCDHGA9-202ENST00000616887 ACSBG1Q96GR2 724 aa13.66□□□□□ -0.22
PCDHGA9-202ENST00000616887 TMEM51Q9NW97 253 aa13.66□□□□□ -0.22
PCDHGA9-202ENST00000616887 SPATA31A5Q5VU36 1347 aa13.66□□□□□ -0.22
PCDHGA9-202ENST00000616887 SPATA31A7Q8IWB4 1347 aa13.66□□□□□ -0.22
PCDHGA9-202ENST00000616887 WNK3Q9BYP7 1800 aa13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 AK2P54819 239 aa13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 CCDC191Q8NCU4 936 aa13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 GJD4Q96KN9 370 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 NEUROD6Q96NK8 337 aa13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 SEC62Q99442 399 aaKnown RBP13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 SPATA31A1Q5TZJ5 1347 aa13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 CCDC171Q6TFL3 1326 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms