RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 RPAP2Q8IXW5 612 aaPredicted RBP10.46□□□□□ -0.73
PSMB3-208ENST00000613870 CCDC191Q8NCU4 936 aa10.46□□□□□ -0.73
PSMB3-208ENST00000613870 ZNF622Q969S3 477 aaKnown RBP eCLIP10.46□□□□□ -0.73
PSMB3-208ENST00000613870 PDZRN3Q9UPQ7 1066 aa10.46□□□□□ -0.73
PSMB3-208ENST00000613870 SLX4Q8IY92 1834 aa10.46□□□□□ -0.74
PSMB3-208ENST00000613870 FER1L6Q2WGJ9 1857 aa10.45□□□□□ -0.74
PSMB3-208ENST00000613870 KLRG2A4D1S0 409 aaPredicted RBP10.45□□□□□ -0.74
PSMB3-208ENST00000613870 KIF3CO14782 793 aa10.45□□□□□ -0.74
PSMB3-208ENST00000613870 NPHP1O15259 732 aa10.45□□□□□ -0.74
PSMB3-208ENST00000613870 SRGNP10124 158 aa10.45□□□□□ -0.74
PSMB3-208ENST00000613870 CEP85Q6P2H3 762 aa10.45□□□□□ -0.74
PSMB3-208ENST00000613870 TPTE2Q6XPS3 522 aa10.45□□□□□ -0.74
PSMB3-208ENST00000613870 ANKRD44Q8N8A2 993 aa10.45□□□□□ -0.74
PSMB3-208ENST00000613870 RNF181Q9P0P0 153 aa10.45□□□□□ -0.74
PSMB3-208ENST00000613870 CHMP3Q9Y3E7 222 aa10.45□□□□□ -0.74
PSMB3-208ENST00000613870 APBB1O00213 710 aa10.44□□□□□ -0.74
PSMB3-208ENST00000613870 NFKBIEO00221 500 aa10.44□□□□□ -0.74
PSMB3-208ENST00000613870 GTF2E1P29083 439 aaPredicted RBP10.44□□□□□ -0.74
PSMB3-208ENST00000613870 HDAC1Q13547 482 aaPredicted RBP10.44□□□□□ -0.74
PSMB3-208ENST00000613870 ISCA1Q9BUE6 129 aa10.44□□□□□ -0.74
PSMB3-208ENST00000613870 ZNF219Q9P2Y4 722 aaPredicted RBP10.44□□□□□ -0.74
PSMB3-208ENST00000613870 TRMT112Q9UI30 125 aaKnown RBP10.44□□□□□ -0.74
PSMB3-208ENST00000613870 ARFGEF2Q9Y6D5 1785 aa10.44□□□□□ -0.74
PSMB3-208ENST00000613870 UBN2Q6ZU65 1347 aa10.43□□□□□ -0.74
PSMB3-208ENST00000613870 SRGAP3O43295 1099 aa10.43□□□□□ -0.74
PSMB3-208ENST00000613870 C21orf2O43822 256 aa10.43□□□□□ -0.74
PSMB3-208ENST00000613870 ATP8B2P98198 1209 aa10.43□□□□□ -0.74
PSMB3-208ENST00000613870 OS9Q13438 667 aaPredicted RBP10.43□□□□□ -0.74
PSMB3-208ENST00000613870 STYK1Q6J9G0 422 aa10.43□□□□□ -0.74
PSMB3-208ENST00000613870 NLRP10Q86W26 655 aa10.43□□□□□ -0.74
PSMB3-208ENST00000613870 ZNF34Q8IZ26 560 aa10.43□□□□□ -0.74
PSMB3-208ENST00000613870 MASTLQ96GX5 879 aa10.43□□□□□ -0.74
PSMB3-208ENST00000613870 SUCLG2Q96I99 432 aa10.43□□□□□ -0.74
PSMB3-208ENST00000613870 TNRC6CQ9HCJ0 1690 aaKnown RBP10.42□□□□□ -0.74
PSMB3-208ENST00000613870 LMNB1P20700 586 aa10.42□□□□□ -0.74
PSMB3-208ENST00000613870 TRIM28Q13263 835 aaKnown RBP10.42□□□□□ -0.74
PSMB3-208ENST00000613870 PARP10Q53GL7 1025 aa10.42□□□□□ -0.74
PSMB3-208ENST00000613870 ANKRD45Q5TZF3 282 aa10.42□□□□□ -0.74
PSMB3-208ENST00000613870 SUSD4Q5VX71 490 aa10.42□□□□□ -0.74
PSMB3-208ENST00000613870 PPP1R42Q7Z4L9 355 aa10.42□□□□□ -0.74
PSMB3-208ENST00000613870 NUTM1Q86Y26 1132 aa10.42□□□□□ -0.74
PSMB3-208ENST00000613870 C7orf43Q8WVR3 580 aa10.42□□□□□ -0.74
PSMB3-208ENST00000613870 CNKSR1Q969H4 720 aa10.42□□□□□ -0.74
PSMB3-208ENST00000613870 FAM89AQ96GI7 184 aa10.42□□□□□ -0.74
PSMB3-208ENST00000613870 UTP14AQ9BVJ6 771 aaKnown RBP10.42□□□□□ -0.74
PSMB3-208ENST00000613870 BICC1Q9H694 974 aaKnown RBP10.42□□□□□ -0.74
PSMB3-208ENST00000613870 NMRK2Q9NPI5 230 aa10.42□□□□□ -0.74
PSMB3-208ENST00000613870 DICER1Q9UPY3 1922 aaKnown RBP10.42□□□□□ -0.74
PSMB3-208ENST00000613870 UTYO14607 1347 aa10.41□□□□□ -0.74
PSMB3-208ENST00000613870 KDM2BQ8NHM5 1336 aa10.41□□□□□ -0.74
PSMB3-208ENST00000613870 H7C1W4 665 aa10.41□□□□□ -0.74
PSMB3-208ENST00000613870 PCCAP05165 728 aaPredicted RBP10.41□□□□□ -0.74
PSMB3-208ENST00000613870 NPR1P16066 1061 aa10.41□□□□□ -0.74
PSMB3-208ENST00000613870 ERFEQ4G0M1 354 aa10.41□□□□□ -0.74
PSMB3-208ENST00000613870 PRPF40BQ6NWY9 871 aaKnown RBP10.41□□□□□ -0.74
PSMB3-208ENST00000613870 SIRT2Q8IXJ6 389 aa10.41□□□□□ -0.74
PSMB3-208ENST00000613870 ZBTB38Q8NAP3 1195 aaPredicted RBP10.41□□□□□ -0.74
PSMB3-208ENST00000613870 GCC1Q96CN9 775 aa10.41□□□□□ -0.74
PSMB3-208ENST00000613870 ABCC12Q96J65 1359 aa10.4□□□□□ -0.74
PSMB3-208ENST00000613870 PNMA6EA0A0J9YXQ4 647 aa10.4□□□□□ -0.74
PSMB3-208ENST00000613870 SURF6O75683 361 aaKnown RBP10.4□□□□□ -0.74
PSMB3-208ENST00000613870 HSP90B1P14625 803 aaKnown RBP10.4□□□□□ -0.74
PSMB3-208ENST00000613870 RGS3P49796 1198 aa10.4□□□□□ -0.74
PSMB3-208ENST00000613870 TAF7LQ5H9L4 462 aa10.4□□□□□ -0.74
PSMB3-208ENST00000613870 NYXQ9GZU5 481 aa10.4□□□□□ -0.74
PSMB3-208ENST00000613870 TIAM2Q8IVF5 1701 aa10.4□□□□□ -0.74
PSMB3-208ENST00000613870 ANKRD36CQ5JPF3 1778 aa10.39□□□□□ -0.75
PSMB3-208ENST00000613870 SH3TC1Q8TE82 1336 aa10.39□□□□□ -0.75
PSMB3-208ENST00000613870 IRS4O14654 1257 aaPredicted RBP10.39□□□□□ -0.75
PSMB3-208ENST00000613870 TOMM70O94826 608 aa10.39□□□□□ -0.75
PSMB3-208ENST00000613870 NTSR2O95665 410 aa10.39□□□□□ -0.75
PSMB3-208ENST00000613870 CRY2Q49AN0 593 aa10.39□□□□□ -0.75
PSMB3-208ENST00000613870 EPHA10Q5JZY3 1008 aa10.39□□□□□ -0.75
PSMB3-208ENST00000613870 LMBR1LQ6UX01 489 aa10.39□□□□□ -0.75
PSMB3-208ENST00000613870 OLFM4Q6UX06 510 aa10.39□□□□□ -0.75
PSMB3-208ENST00000613870 CCDC85AQ96PX6 553 aaPredicted RBP10.39□□□□□ -0.75
PSMB3-208ENST00000613870 RRAGCQ9HB90 399 aa10.39□□□□□ -0.75
PSMB3-208ENST00000613870 EXOC6BQ9Y2D4 811 aa10.39□□□□□ -0.75
PSMB3-208ENST00000613870 IBTKQ9P2D0 1353 aaPredicted RBP10.39□□□□□ -0.75
PSMB3-208ENST00000613870 LTBP3Q9NS15 1303 aa10.38□□□□□ -0.75
PSMB3-208ENST00000613870 ZC3H4Q9UPT8 1303 aaKnown RBP10.38□□□□□ -0.75
PSMB3-208ENST00000613870 GLTPD2A6NH11 291 aa10.38□□□□□ -0.75
PSMB3-208ENST00000613870 HCLS1P14317 486 aaPredicted RBP10.38□□□□□ -0.75
PSMB3-208ENST00000613870 ALDH1B1P30837 517 aa10.38□□□□□ -0.75
PSMB3-208ENST00000613870 G3BP1Q13283 466 aaKnown RBP eCLIP10.38□□□□□ -0.758e-10■■■■□ 23.7
PSMB3-208ENST00000613870 CCDC57Q2TAC2 916 aa10.38□□□□□ -0.75
PSMB3-208ENST00000613870 HSP90AB4PQ58FF6 505 aa10.38□□□□□ -0.75
PSMB3-208ENST00000613870 SYNE4Q8N205 404 aa10.38□□□□□ -0.75
PSMB3-208ENST00000613870 LNPKQ9C0E8 428 aa10.38□□□□□ -0.75
PSMB3-208ENST00000613870 TAOK3Q9H2K8 898 aa10.38□□□□□ -0.75
PSMB3-208ENST00000613870 DCTPP1Q9H773 170 aa10.38□□□□□ -0.75
PSMB3-208ENST00000613870 RIC1Q4ADV7 1423 aa10.38□□□□□ -0.75
PSMB3-208ENST00000613870 PDE8AO60658 829 aa10.37□□□□□ -0.75
PSMB3-208ENST00000613870 HSPA6P17066 643 aa10.37□□□□□ -0.75
PSMB3-208ENST00000613870 HOXA10P31260 410 aaPredicted RBP10.37□□□□□ -0.75
PSMB3-208ENST00000613870 CASP7P55210 303 aa10.37□□□□□ -0.75
PSMB3-208ENST00000613870 FOXO4P98177 505 aa10.37□□□□□ -0.75
PSMB3-208ENST00000613870 SOGA3Q5TF21 947 aa10.37□□□□□ -0.75
PSMB3-208ENST00000613870 C3orf67Q6ZVT6 689 aa10.37□□□□□ -0.75
PSMB3-208ENST00000613870 CHD1LQ86WJ1 897 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms