RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 NACAP1Q9BZK3 213 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 DACT1Q9NYF0 836 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 RGS12O14924 1447 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 ERBB4Q15303 1308 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 ATP2B3Q16720 1220 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 SPC24Q8NBT2 197 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 FBXW7Q969H0 707 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 AIDAQ96BJ3 306 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 NAT10Q9H0A0 1025 aaKnown RBP7.5□□□□□ -1.21
SNX13-213ENST00000611725 NDUFB9Q9Y6M9 179 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 A0A0D9SFI3 127 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 ZFYP08048 801 aaPredicted RBP7.5□□□□□ -1.21
SNX13-213ENST00000611725 HAND2P61296 217 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 CCT2P78371 535 aaKnown RBP7.5□□□□□ -1.21
SNX13-213ENST00000611725 FAM200AQ8TCP9 573 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 DBNLQ9UJU6 430 aaKnown RBP7.5□□□□□ -1.21
SNX13-213ENST00000611725 IGKV5-2P06315 115 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 ATP2B1P20020 1258 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 ZNF165P49910 485 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 ADCK5Q3MIX3 580 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 PAG1Q9NWQ8 432 aa7.5□□□□□ -1.21
SNX13-213ENST00000611725 ERICH2A1L162 156 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 SLC27A2O14975 620 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 SASH1O94885 1247 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 DHX32Q7L7V1 743 aaKnown RBP7.49□□□□□ -1.21
SNX13-213ENST00000611725 UBE2Q2Q8WVN8 375 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 CCDC191Q8NCU4 936 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 PCDH11XQ9BZA7 1347 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 PCDH11YQ9BZA8 1340 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 EXOC5O00471 708 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 CYP27B1O15528 508 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 TERF1P54274 439 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 ZDHHC9Q9Y397 364 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 ANKRD18BA2A2Z9 1011 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 SPATA31D1Q6ZQQ2 1576 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 CAMSAP1Q5T5Y3 1602 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 ADCY5O95622 1261 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 C8orf76Q96K31 380 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 GADD45BO75293 160 aaPredicted RBP7.49□□□□□ -1.21
SNX13-213ENST00000611725 CAVIN2O95810 425 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 CYP2E1P05181 493 aaPredicted RBP7.49□□□□□ -1.21
SNX13-213ENST00000611725 FAM89AQ96GI7 184 aa7.49□□□□□ -1.21
SNX13-213ENST00000611725 ZSCAN16Q9H4T2 348 aaPredicted RBP7.49□□□□□ -1.21
SNX13-213ENST00000611725 NPHP4O75161 1426 aaPredicted RBP7.48□□□□□ -1.21
SNX13-213ENST00000611725 ADGRL3Q9HAR2 1447 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 CDKL5O76039 1030 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 RRP12Q5JTH9 1297 aaKnown RBP7.48□□□□□ -1.21
SNX13-213ENST00000611725 ZSWIM6Q9HCJ5 1215 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 TLR7Q9NYK1 1049 aaKnown RBP7.48□□□□□ -1.21
SNX13-213ENST00000611725 ORC3Q9UBD5 711 aaPredicted RBP7.48□□□□□ -1.21
SNX13-213ENST00000611725 MTMR6Q9Y217 621 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 RNF113AO15541 343 aaKnown RBP7.48□□□□□ -1.21
SNX13-213ENST00000611725 GUCY1B3Q02153 619 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 FILIP1Q7Z7B0 1213 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 TRIM22Q8IYM9 498 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 GPT2Q8TD30 523 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 CEMIPQ8WUJ3 1361 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 CEP152O94986 1710 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 A0A1B0GUL7 405 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 GOLGA8BA8MQT2 603 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 ZNF213O14771 459 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 Q6ZUG5 572 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 RPS6KB1P23443 525 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 ME3Q16798 604 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 DNAJC10Q8IXB1 793 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 PDLIM2Q96JY6 352 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 TAF5LO75529 589 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 CCDC129Q6ZRS4 1044 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 MAP7D2Q96T17 732 aa7.48□□□□□ -1.21
SNX13-213ENST00000611725 EPHA10Q5JZY3 1008 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 NOL7Q9UMY1 257 aaKnown RBP7.47□□□□□ -1.21
SNX13-213ENST00000611725 RASSF8Q8NHQ8 419 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 CDC42BPGQ6DT37 1551 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 ADCY9O60503 1353 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 PTPN12Q05209 780 aaKnown RBP7.47□□□□□ -1.21
SNX13-213ENST00000611725 QRICH2Q9H0J4 1663 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 KLF18A0A0U1RQI7 1052 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 OFD1O75665 1012 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 MAP3K12Q12852 859 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 SLC9C2Q5TAH2 1124 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 TTLL7Q6ZT98 887 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 ZNF592Q92610 1267 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 NAPBQ9H115 298 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 ABCF2Q9UG63 623 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 KDM4AO75164 1064 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 NCOA7Q8NI08 942 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 GNL3LQ9NVN8 582 aaKnown RBP7.47□□□□□ -1.21
SNX13-213ENST00000611725 SLAIN2Q9P270 581 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 PTPDC1A2A3K4 754 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 IGHMBP2P38935 993 aaKnown RBP7.47□□□□□ -1.21
SNX13-213ENST00000611725 IL25Q9H293 177 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 TPCN1Q9ULQ1 816 aa7.47□□□□□ -1.21
SNX13-213ENST00000611725 SALL3Q9BXA9 1300 aa7.46□□□□□ -1.21
SNX13-213ENST00000611725 TDO2P48775 406 aa7.46□□□□□ -1.21
SNX13-213ENST00000611725 ZNF594Q96JF6 807 aaPredicted RBP7.46□□□□□ -1.21
SNX13-213ENST00000611725 TTC12Q9H892 705 aaPredicted RBP7.46□□□□□ -1.21
SNX13-213ENST00000611725 LRP2BPQ9P2M1 347 aa7.46□□□□□ -1.21
SNX13-213ENST00000611725 NECTIN1Q15223 517 aa7.46□□□□□ -1.22
SNX13-213ENST00000611725 TTC6Q86TZ1 520 aa7.46□□□□□ -1.22
SNX13-213ENST00000611725 MYO3AQ8NEV4 1616 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms