RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 ALDH1L2Q3SY69 923 aa21.3■■□□□ 1
SSBP4-213ENST00000602088 GRIPAP1Q4V328 841 aa21.3■■□□□ 1
SSBP4-213ENST00000602088 BEND3Q5T5X7 828 aa21.3■■□□□ 1
SSBP4-213ENST00000602088 SLC51AQ86UW1 340 aa21.3■■□□□ 1
SSBP4-213ENST00000602088 ATP6V0A2Q9Y487 856 aa21.3■■□□□ 1
SSBP4-213ENST00000602088 DICER1Q9UPY3 1922 aaKnown RBP21.29■■□□□ 1
SSBP4-213ENST00000602088 TAF1P21675 1872 aa21.29■■□□□ 1
SSBP4-213ENST00000602088 PSMD1Q99460 953 aa21.29■■□□□ 1
SSBP4-213ENST00000602088 UBE3BQ7Z3V4 1068 aa21.28■■□□□ 1
SSBP4-213ENST00000602088 SP8Q8IXZ3 490 aa21.28■■□□□ 1
SSBP4-213ENST00000602088 ZNF277Q9NRM2 450 aaPredicted RBP21.28■■□□□ 1
SSBP4-213ENST00000602088 TMC4Q7Z404 712 aa21.27■■□□□ 1
SSBP4-213ENST00000602088 CELF1Q92879 486 aaKnown RBP21.27■■□□□ 1
SSBP4-213ENST00000602088 TMX4Q9H1E5 349 aaPredicted RBP21.27■■□□□ 1
SSBP4-213ENST00000602088 CASP7P55210 303 aa21.26■□□□□ 0.99
SSBP4-213ENST00000602088 CCDC152Q4G0S7 254 aa21.26■□□□□ 0.99
SSBP4-213ENST00000602088 BCL2L13Q9BXK5 485 aa21.26■□□□□ 0.99
SSBP4-213ENST00000602088 TIAM2Q8IVF5 1701 aa21.26■□□□□ 0.99
SSBP4-213ENST00000602088 PTPRCP08575 1304 aa21.26■□□□□ 0.99
SSBP4-213ENST00000602088 CTSWP56202 376 aa21.25■□□□□ 0.99
SSBP4-213ENST00000602088 SMC4Q9NTJ3 1288 aa21.25■□□□□ 0.99
SSBP4-213ENST00000602088 IARSP41252 1262 aaKnown RBP21.24■□□□□ 0.99
SSBP4-213ENST00000602088 RPS8P62241 208 aaKnown RBP21.24■□□□□ 0.99
SSBP4-213ENST00000602088 SLC4A10Q6U841 1118 aa21.24■□□□□ 0.99
SSBP4-213ENST00000602088 TTLL11Q8NHH1 800 aa21.24■□□□□ 0.99
SSBP4-213ENST00000602088 PLA2G12BQ9BX93 195 aa21.24■□□□□ 0.99
SSBP4-213ENST00000602088 SEC31BQ9NQW1 1179 aa21.24■□□□□ 0.99
SSBP4-213ENST00000602088 COL4A1P02462 1669 aa21.24■□□□□ 0.99
SSBP4-213ENST00000602088 KDM2BQ8NHM5 1336 aa21.24■□□□□ 0.99
SSBP4-213ENST00000602088 GLTPD2A6NH11 291 aa21.23■□□□□ 0.99
SSBP4-213ENST00000602088 ALDH1L1O75891 902 aa21.23■□□□□ 0.99
SSBP4-213ENST00000602088 CCDC85AQ96PX6 553 aaPredicted RBP21.23■□□□□ 0.99
SSBP4-213ENST00000602088 RTFDC1Q9BY42 306 aaPredicted RBP21.23■□□□□ 0.99
SSBP4-213ENST00000602088 SRCIN1Q9C0H9 1055 aa21.23■□□□□ 0.99
SSBP4-213ENST00000602088 MYH3P11055 1940 aa21.22■□□□□ 0.99
SSBP4-213ENST00000602088 RARSP54136 660 aaKnown RBP21.22■□□□□ 0.99
SSBP4-213ENST00000602088 BRPF1P55201 1214 aaPredicted RBP21.22■□□□□ 0.99
SSBP4-213ENST00000602088 MPNDQ8N594 471 aa21.22■□□□□ 0.99
SSBP4-213ENST00000602088 NMRK2Q9NPI5 230 aa21.22■□□□□ 0.99
SSBP4-213ENST00000602088 LRRC37AA6NMS7 1700 aa21.21■□□□□ 0.99
SSBP4-213ENST00000602088 KIF3CO14782 793 aa21.21■□□□□ 0.99
SSBP4-213ENST00000602088 DPY19L2Q6NUT2 758 aa21.21■□□□□ 0.99
SSBP4-213ENST00000602088 DPP8Q6V1X1 898 aaPredicted RBP21.21■□□□□ 0.99
SSBP4-213ENST00000602088 ZBED9Q6R2W3 1325 aa21.21■□□□□ 0.99
SSBP4-213ENST00000602088 GRM8O00222 908 aa21.2■□□□□ 0.98
SSBP4-213ENST00000602088 VPS33BQ9H267 617 aa21.2■□□□□ 0.98
SSBP4-213ENST00000602088 GREM2Q9H772 168 aa21.2■□□□□ 0.98
SSBP4-213ENST00000602088 RTL9Q8NET4 1388 aa21.2■□□□□ 0.98
SSBP4-213ENST00000602088 CSF1RP07333 972 aa21.19■□□□□ 0.98
SSBP4-213ENST00000602088 SUPT20HQ8NEM7 779 aa21.19■□□□□ 0.98
SSBP4-213ENST00000602088 C9orf78Q9NZ63 289 aaPredicted RBP21.19■□□□□ 0.98
SSBP4-213ENST00000602088 ANKRD18AQ8IVF6 992 aa21.18■□□□□ 0.98
SSBP4-213ENST00000602088 LARGE2Q8N3Y3 721 aa21.18■□□□□ 0.98
SSBP4-213ENST00000602088 JDP2Q8WYK2 163 aa21.18■□□□□ 0.98
SSBP4-213ENST00000602088 RRAGCQ9HB90 399 aa21.18■□□□□ 0.98
SSBP4-213ENST00000602088 FZD9O00144 591 aa21.17■□□□□ 0.98
SSBP4-213ENST00000602088 FOXO4P98177 505 aa21.17■□□□□ 0.98
SSBP4-213ENST00000602088 CDC5LQ99459 802 aaKnown RBP21.17■□□□□ 0.98
SSBP4-213ENST00000602088 NOB1Q9ULX3 412 aaKnown RBP21.17■□□□□ 0.98
SSBP4-213ENST00000602088 NSFL1CQ9UNZ2 370 aaKnown RBP21.17■□□□□ 0.98
SSBP4-213ENST00000602088 COL4A5P29400 1685 aa21.17■□□□□ 0.98
SSBP4-213ENST00000602088 UTYO14607 1347 aa21.16■□□□□ 0.98
SSBP4-213ENST00000602088 PPIP5K2O43314 1243 aa21.16■□□□□ 0.98
SSBP4-213ENST00000602088 DDNO94850 711 aaPredicted RBP21.16■□□□□ 0.98
SSBP4-213ENST00000602088 C1QTNF8P60827 252 aa21.16■□□□□ 0.98
SSBP4-213ENST00000602088 GPSM2P81274 684 aa21.16■□□□□ 0.98
SSBP4-213ENST00000602088 AOC3Q16853 763 aa21.16■□□□□ 0.98
SSBP4-213ENST00000602088 DUOX1Q9NRD9 1551 aa21.15■□□□□ 0.98
SSBP4-213ENST00000602088 PODXL2Q9NZ53 605 aa21.15■□□□□ 0.98
SSBP4-213ENST00000602088 ZNF541Q9H0D2 1346 aa21.14■□□□□ 0.97
SSBP4-213ENST00000602088 NBPF7P0C2Y1 421 aaPredicted RBP21.14■□□□□ 0.97
SSBP4-213ENST00000602088 ITGA6P23229 1130 aa21.14■□□□□ 0.97
SSBP4-213ENST00000602088 KIAA2012Q0VF49 1180 aa21.14■□□□□ 0.97
SSBP4-213ENST00000602088 FAM161AQ3B820 660 aa21.14■□□□□ 0.97
SSBP4-213ENST00000602088 EPHA10Q5JZY3 1008 aa21.14■□□□□ 0.97
SSBP4-213ENST00000602088 BSDC1Q9NW68 430 aaPredicted RBP21.14■□□□□ 0.97
SSBP4-213ENST00000602088 POLLQ9UGP5 575 aa21.14■□□□□ 0.97
SSBP4-213ENST00000602088 LTBP1Q14766 1721 aa21.13■□□□□ 0.97
SSBP4-213ENST00000602088 WDR90Q96KV7 1748 aa21.13■□□□□ 0.97
SSBP4-213ENST00000602088 KIF16BQ96L93 1317 aa21.13■□□□□ 0.97
SSBP4-213ENST00000602088 POTECB2RU33 542 aa21.13■□□□□ 0.97
SSBP4-213ENST00000602088 VEGFAP15692 232 aaPredicted RBP21.13■□□□□ 0.97
SSBP4-213ENST00000602088 NIM1KQ8IY84 436 aa21.13■□□□□ 0.97
SSBP4-213ENST00000602088 API5Q9BZZ5 524 aaKnown RBP21.13■□□□□ 0.97
SSBP4-213ENST00000602088 C6orf229H3BNL8 230 aa21.12■□□□□ 0.97
SSBP4-213ENST00000602088 TOMM70O94826 608 aa21.12■□□□□ 0.97
SSBP4-213ENST00000602088 LMBR1LQ6UX01 489 aa21.12■□□□□ 0.97
SSBP4-213ENST00000602088 TBC1D16Q8TBP0 767 aa21.12■□□□□ 0.97
SSBP4-213ENST00000602088 ARHGAP45Q92619 1136 aa21.12■□□□□ 0.97
SSBP4-213ENST00000602088 KAZALD1Q96I82 304 aa21.12■□□□□ 0.97
SSBP4-213ENST00000602088 SUCLG2Q96I99 432 aa21.12■□□□□ 0.97
SSBP4-213ENST00000602088 USP44Q9H0E7 712 aa21.12■□□□□ 0.97
SSBP4-213ENST00000602088 ANKIB1Q9P2G1 1089 aa21.12■□□□□ 0.97
SSBP4-213ENST00000602088 BCAR3O75815 825 aa21.11■□□□□ 0.97
SSBP4-213ENST00000602088 EIF6P56537 245 aaKnown RBP21.11■□□□□ 0.97
SSBP4-213ENST00000602088 WASHC4Q2M389 1173 aa21.11■□□□□ 0.97
SSBP4-213ENST00000602088 L3MBTL3Q96JM7 780 aaPredicted RBP21.11■□□□□ 0.97
SSBP4-213ENST00000602088 MINPP1Q9UNW1 487 aa21.11■□□□□ 0.97
SSBP4-213ENST00000602088 ANKRD18BA2A2Z9 1011 aa21.1■□□□□ 0.97
SSBP4-213ENST00000602088 IGHMBP2P38935 993 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms