RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 IRS4O14654 1257 aaPredicted RBP29.18■■■□□ 2.26
SSBP4-209ENST00000601357 DDX58O95786 925 aaKnown RBP29.18■■■□□ 2.26
SSBP4-209ENST00000601357 RTL5Q5HYW3 569 aaPredicted RBP29.18■■■□□ 2.26
SSBP4-209ENST00000601357 CHADLQ6NUI6 762 aa29.18■■■□□ 2.26
SSBP4-209ENST00000601357 TMC4Q7Z404 712 aa29.18■■■□□ 2.26
SSBP4-209ENST00000601357 WDR63Q8IWG1 891 aa29.18■■■□□ 2.26
SSBP4-209ENST00000601357 CCDC191Q8NCU4 936 aa29.18■■■□□ 2.26
SSBP4-209ENST00000601357 METTL22Q9BUU2 404 aaPredicted RBP29.18■■■□□ 2.26
SSBP4-209ENST00000601357 SUPT20HQ8NEM7 779 aa29.17■■■□□ 2.26
SSBP4-209ENST00000601357 HACL1Q9UJ83 578 aa29.17■■■□□ 2.26
SSBP4-209ENST00000601357 FANCIQ9NVI1 1328 aa29.17■■■□□ 2.26
SSBP4-209ENST00000601357 PPIP5K2O43314 1243 aa29.16■■■□□ 2.26
SSBP4-209ENST00000601357 EIF6P56537 245 aaKnown RBP29.16■■■□□ 2.26
SSBP4-209ENST00000601357 AOC3Q16853 763 aa29.16■■■□□ 2.26
SSBP4-209ENST00000601357 DPP8Q6V1X1 898 aaPredicted RBP29.16■■■□□ 2.26
SSBP4-209ENST00000601357 MPNDQ8N594 471 aa29.16■■■□□ 2.26
SSBP4-209ENST00000601357 LTBP1Q14766 1721 aa29.16■■■□□ 2.26
SSBP4-209ENST00000601357 KSR2Q6VAB6 950 aa29.15■■■□□ 2.26
SSBP4-209ENST00000601357 LDHDQ86WU2 507 aa29.15■■■□□ 2.26
SSBP4-209ENST00000601357 CELF1Q92879 486 aaKnown RBP29.15■■■□□ 2.26
SSBP4-209ENST00000601357 STK31Q9BXU1 1019 aa29.15■■■□□ 2.26
SSBP4-209ENST00000601357 MAP3K2Q9Y2U5 619 aa29.15■■■□□ 2.26
SSBP4-209ENST00000601357 PCCAP05165 728 aaPredicted RBP29.14■■■□□ 2.26
SSBP4-209ENST00000601357 NIM1KQ8IY84 436 aa29.14■■■□□ 2.26
SSBP4-209ENST00000601357 KLRG1Q96E93 195 aa29.14■■■□□ 2.26
SSBP4-209ENST00000601357 CWC25Q9NXE8 425 aaPredicted RBP29.14■■■□□ 2.26
SSBP4-209ENST00000601357 PI4KAP2A4QPH2 592 aa29.13■■■□□ 2.25
SSBP4-209ENST00000601357 EPHX2P34913 555 aa29.13■■■□□ 2.25
SSBP4-209ENST00000601357 PI4KAP1Q8N8J0 262 aa29.13■■■□□ 2.25
SSBP4-209ENST00000601357 SALL2Q9Y467 1007 aaPredicted RBP29.13■■■□□ 2.25
SSBP4-209ENST00000601357 KIAA2012Q0VF49 1180 aa29.12■■■□□ 2.25
SSBP4-209ENST00000601357 IGKV5-2P06315 115 aa29.11■■■□□ 2.25
SSBP4-209ENST00000601357 HSP90B1P14625 803 aaKnown RBP29.11■■■□□ 2.25
SSBP4-209ENST00000601357 G2E3Q7L622 706 aa29.11■■■□□ 2.25
SSBP4-209ENST00000601357 FAM9BQ8IZU0 186 aa29.11■■■□□ 2.25
SSBP4-209ENST00000601357 CACNA1FO60840 1977 aa29.11■■■□□ 2.25
SSBP4-209ENST00000601357 SLC4A2P04920 1241 aa29.1■■■□□ 2.25
SSBP4-209ENST00000601357 PNMA8AQ86V59 439 aaPredicted RBP29.1■■■□□ 2.25
SSBP4-209ENST00000601357 ZNRF3Q9ULT6 936 aa29.1■■■□□ 2.25
SSBP4-209ENST00000601357 GJA3Q9Y6H8 435 aa29.1■■■□□ 2.25
SSBP4-209ENST00000601357 SCNN1DP51172 638 aa29.09■■■□□ 2.25
SSBP4-209ENST00000601357 JMYQ8N9B5 988 aa29.09■■■□□ 2.25
SSBP4-209ENST00000601357 PCNTO95613 3336 aa29.08■■■□□ 2.25
SSBP4-209ENST00000601357 PDE8AO60658 829 aa29.08■■■□□ 2.25
SSBP4-209ENST00000601357 VAMP4O75379 141 aa29.08■■■□□ 2.25
SSBP4-209ENST00000601357 EAPPQ56P03 285 aaPredicted RBP29.08■■■□□ 2.25
SSBP4-209ENST00000601357 SPINK5Q9NQ38 1064 aaPredicted RBP29.08■■■□□ 2.25
SSBP4-209ENST00000601357 PASKQ96RG2 1323 aa29.08■■■□□ 2.25
SSBP4-209ENST00000601357 CDHR2Q9BYE9 1310 aa29.08■■■□□ 2.25
SSBP4-209ENST00000601357 RPS8P62241 208 aaKnown RBP29.07■■■□□ 2.24
SSBP4-209ENST00000601357 EXOSC9Q06265 439 aaKnown RBP29.06■■■□□ 2.24
SSBP4-209ENST00000601357 CXCL9Q07325 125 aa29.06■■■□□ 2.24
SSBP4-209ENST00000601357 JARID2Q92833 1246 aaPredicted RBP29.06■■■□□ 2.24
SSBP4-209ENST00000601357 SEC31BQ9NQW1 1179 aa29.06■■■□□ 2.24
SSBP4-209ENST00000601357 ITGBL1O95965 494 aaPredicted RBP29.05■■■□□ 2.24
SSBP4-209ENST00000601357 FLIIQ13045 1269 aa29.05■■■□□ 2.24
SSBP4-209ENST00000601357 NEURL1BA8MQ27 555 aa29.04■■■□□ 2.24
SSBP4-209ENST00000601357 LMOD1P29536 600 aaPredicted RBP29.04■■■□□ 2.24
SSBP4-209ENST00000601357 EPS15P42566 896 aa29.04■■■□□ 2.24
SSBP4-209ENST00000601357 GPSM2P81274 684 aa29.04■■■□□ 2.24
SSBP4-209ENST00000601357 NEXNQ0ZGT2 675 aa29.04■■■□□ 2.24
SSBP4-209ENST00000601357 CCDC152Q4G0S7 254 aa29.04■■■□□ 2.24
SSBP4-209ENST00000601357 NSFL1CQ9UNZ2 370 aaKnown RBP29.04■■■□□ 2.24
SSBP4-209ENST00000601357 MYH3P11055 1940 aa29.04■■■□□ 2.24
SSBP4-209ENST00000601357 CWF19L2Q2TBE0 894 aaKnown RBP29.03■■■□□ 2.24
SSBP4-209ENST00000601357 CREBZFQ9NS37 354 aa29.03■■■□□ 2.24
SSBP4-209ENST00000601357 POLLQ9UGP5 575 aa29.03■■■□□ 2.24
SSBP4-209ENST00000601357 ZNF521Q96K83 1311 aa29.01■■■□□ 2.23
SSBP4-209ENST00000601357 YDJCA8MPS7 323 aa29.01■■■□□ 2.23
SSBP4-209ENST00000601357 GPRC5DQ9NZD1 345 aa29.01■■■□□ 2.23
SSBP4-209ENST00000601357 CLEC11AQ9Y240 323 aa29.01■■■□□ 2.23
SSBP4-209ENST00000601357 CTSWP56202 376 aa29■■■□□ 2.23
SSBP4-209ENST00000601357 WASHC4Q2M389 1173 aa29■■■□□ 2.23
SSBP4-209ENST00000601357 MYH16Q9H6N6 1097 aa29■■■□□ 2.23
SSBP4-209ENST00000601357 PODXL2Q9NZ53 605 aa29■■■□□ 2.23
SSBP4-209ENST00000601357 CIAPIN1Q6FI81 312 aa28.99■■■□□ 2.23
SSBP4-209ENST00000601357 TBC1D16Q8TBP0 767 aa28.99■■■□□ 2.23
SSBP4-209ENST00000601357 H7C1W4 665 aa28.98■■■□□ 2.23
SSBP4-209ENST00000601357 FKBP5Q13451 457 aaPredicted RBP28.98■■■□□ 2.23
SSBP4-209ENST00000601357 MAP1SQ66K74 1059 aaPredicted RBP28.98■■■□□ 2.23
SSBP4-209ENST00000601357 USP50Q70EL3 339 aaPredicted RBP28.98■■■□□ 2.23
SSBP4-209ENST00000601357 CNTROBQ8N137 903 aa28.98■■■□□ 2.23
SSBP4-209ENST00000601357 CCDC85AQ96PX6 553 aaPredicted RBP28.98■■■□□ 2.23
SSBP4-209ENST00000601357 C6orf229H3BNL8 230 aa28.97■■■□□ 2.23
SSBP4-209ENST00000601357 RAD17O75943 681 aa28.97■■■□□ 2.23
SSBP4-209ENST00000601357 GMPSP49915 693 aaPredicted RBP28.97■■■□□ 2.23
SSBP4-209ENST00000601357 GCKRQ14397 625 aa28.97■■■□□ 2.23
SSBP4-209ENST00000601357 TNIP1Q15025 636 aa28.97■■■□□ 2.23
SSBP4-209ENST00000601357 TTLL11Q8NHH1 800 aa28.97■■■□□ 2.23
SSBP4-209ENST00000601357 DNAAF4Q8WXU2 420 aa28.97■■■□□ 2.23
SSBP4-209ENST00000601357 RTL9Q8NET4 1388 aa28.97■■■□□ 2.23
SSBP4-209ENST00000601357 UBE3BQ7Z3V4 1068 aa28.95■■■□□ 2.22
SSBP4-209ENST00000601357 LINS1Q8NG48 757 aa28.95■■■□□ 2.22
SSBP4-209ENST00000601357 EYA3Q99504 573 aa28.95■■■□□ 2.22
SSBP4-209ENST00000601357 ADARB2Q9NS39 739 aaKnown RBP28.95■■■□□ 2.22
SSBP4-209ENST00000601357 RIMBP2O15034 1052 aa28.94■■■□□ 2.22
SSBP4-209ENST00000601357 CASP7P55210 303 aa28.94■■■□□ 2.22
SSBP4-209ENST00000601357 ANKRD18AQ8IVF6 992 aa28.94■■■□□ 2.22
SSBP4-209ENST00000601357 DBNDD1Q9H9R9 158 aa28.94■■■□□ 2.22
SSBP4-209ENST00000601357 SPEF2Q9C093 1822 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms