RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 H7C1W4 665 aa20.1■□□□□ 0.81
RPS28-203ENST00000600659 FKBP4Q02790 459 aaKnown RBP eCLIP20.1■□□□□ 0.81
RPS28-203ENST00000600659 GRAPQ13588 217 aa20.1■□□□□ 0.81
RPS28-203ENST00000600659 GRAPLQ8TC17 118 aaPredicted RBP20.1■□□□□ 0.81
RPS28-203ENST00000600659 CELF1Q92879 486 aaKnown RBP20.09■□□□□ 0.81
RPS28-203ENST00000600659 BCL2L13Q9BXK5 485 aa20.09■□□□□ 0.81
RPS28-203ENST00000600659 ATP6V0A2Q9Y487 856 aa20.09■□□□□ 0.81
RPS28-203ENST00000600659 PDE8AO60658 829 aa20.08■□□□□ 0.81
RPS28-203ENST00000600659 CT47B1P0C2W7 299 aaPredicted RBP20.08■□□□□ 0.81
RPS28-203ENST00000600659 ALDH1L2Q3SY69 923 aa20.08■□□□□ 0.81
RPS28-203ENST00000600659 DDX46Q7L014 1031 aaKnown RBP20.08■□□□□ 0.81
RPS28-203ENST00000600659 RTKN2Q8IZC4 609 aa20.08■□□□□ 0.81
RPS28-203ENST00000600659 ZNF526Q8TF50 670 aaPredicted RBP20.08■□□□□ 0.81
RPS28-203ENST00000600659 CC2D2BQ6DHV5 1058 aa20.07■□□□□ 0.8
RPS28-203ENST00000600659 PSMD1Q99460 953 aa20.07■□□□□ 0.8
RPS28-203ENST00000600659 SEC31BQ9NQW1 1179 aa20.07■□□□□ 0.8
RPS28-203ENST00000600659 ZNF277Q9NRM2 450 aaPredicted RBP20.07■□□□□ 0.8
RPS28-203ENST00000600659 ZBED9Q6R2W3 1325 aa20.07■□□□□ 0.8
RPS28-203ENST00000600659 BBOX1O75936 387 aa20.06■□□□□ 0.8
RPS28-203ENST00000600659 UBE3BQ7Z3V4 1068 aa20.06■□□□□ 0.8
RPS28-203ENST00000600659 WDR90Q96KV7 1748 aa20.06■□□□□ 0.8
RPS28-203ENST00000600659 CTSWP56202 376 aa20.05■□□□□ 0.8
RPS28-203ENST00000600659 SP8Q8IXZ3 490 aa20.05■□□□□ 0.8
RPS28-203ENST00000600659 PLA2G12BQ9BX93 195 aa20.05■□□□□ 0.8
RPS28-203ENST00000600659 GPBP1L1Q9HC44 474 aaPredicted RBP20.05■□□□□ 0.8
RPS28-203ENST00000600659 RTL9Q8NET4 1388 aa20.05■□□□□ 0.8
RPS28-203ENST00000600659 PTPRCP08575 1304 aa20.05■□□□□ 0.8
RPS28-203ENST00000600659 KIF3CO14782 793 aa20.04■□□□□ 0.8
RPS28-203ENST00000600659 BRPF1P55201 1214 aaPredicted RBP20.04■□□□□ 0.8
RPS28-203ENST00000600659 TTLL11Q8NHH1 800 aa20.04■□□□□ 0.8
RPS28-203ENST00000600659 A0A1B0GUL6 1792 aa20.04■□□□□ 0.8
RPS28-203ENST00000600659 RARSP54136 660 aaKnown RBP20.03■□□□□ 0.8
RPS28-203ENST00000600659 CCDC85AQ96PX6 553 aaPredicted RBP20.03■□□□□ 0.8
RPS28-203ENST00000600659 RTFDC1Q9BY42 306 aaPredicted RBP20.03■□□□□ 0.8
RPS28-203ENST00000600659 SMC4Q9NTJ3 1288 aa20.03■□□□□ 0.8
RPS28-203ENST00000600659 HSP90B1P14625 803 aaKnown RBP20.02■□□□□ 0.8
RPS28-203ENST00000600659 IARSP41252 1262 aaKnown RBP20.02■□□□□ 0.8
RPS28-203ENST00000600659 CCDC152Q4G0S7 254 aa20.02■□□□□ 0.8
RPS28-203ENST00000600659 NMRK2Q9NPI5 230 aa20.02■□□□□ 0.8
RPS28-203ENST00000600659 GLTPD2A6NH11 291 aa20.02■□□□□ 0.79
RPS28-203ENST00000600659 ALDH1L1O75891 902 aa20.02■□□□□ 0.79
RPS28-203ENST00000600659 GRIPAP1Q4V328 841 aa20.02■□□□□ 0.79
RPS28-203ENST00000600659 SLC4A10Q6U841 1118 aa20.02■□□□□ 0.79
RPS28-203ENST00000600659 TMC4Q7Z404 712 aa20.02■□□□□ 0.79
RPS28-203ENST00000600659 GREM2Q9H772 168 aa20.02■□□□□ 0.79
RPS28-203ENST00000600659 CSF1RP07333 972 aa20.01■□□□□ 0.79
RPS28-203ENST00000600659 RPS8P62241 208 aaKnown RBP20.01■□□□□ 0.79
RPS28-203ENST00000600659 SRCIN1Q9C0H9 1055 aa20.01■□□□□ 0.79
RPS28-203ENST00000600659 UTYO14607 1347 aa20■□□□□ 0.79
RPS28-203ENST00000600659 GRM8O00222 908 aa20■□□□□ 0.79
RPS28-203ENST00000600659 FOXO4P98177 505 aa20■□□□□ 0.79
RPS28-203ENST00000600659 EPHA10Q5JZY3 1008 aa20■□□□□ 0.79
RPS28-203ENST00000600659 KAZALD1Q96I82 304 aa20■□□□□ 0.79
RPS28-203ENST00000600659 ZNF541Q9H0D2 1346 aa19.99■□□□□ 0.79
RPS28-203ENST00000600659 POTECB2RU33 542 aa19.99■□□□□ 0.79
RPS28-203ENST00000600659 FZD9O00144 591 aa19.99■□□□□ 0.79
RPS28-203ENST00000600659 NOB1Q9ULX3 412 aaKnown RBP19.99■□□□□ 0.79
RPS28-203ENST00000600659 GPSM2P81274 684 aa19.98■□□□□ 0.79
RPS28-203ENST00000600659 FAM161AQ3B820 660 aa19.98■□□□□ 0.79
RPS28-203ENST00000600659 MPNDQ8N594 471 aa19.98■□□□□ 0.79
RPS28-203ENST00000600659 KDM2BQ8NHM5 1336 aa19.97■□□□□ 0.79
RPS28-203ENST00000600659 NBPF7P0C2Y1 421 aaPredicted RBP19.97■□□□□ 0.79
RPS28-203ENST00000600659 DPP8Q6V1X1 898 aaPredicted RBP19.97■□□□□ 0.79
RPS28-203ENST00000600659 SCN4AP35499 1836 aa19.97■□□□□ 0.79
RPS28-203ENST00000600659 SCN9AQ15858 1988 aa19.96■□□□□ 0.79
RPS28-203ENST00000600659 AOC3Q16853 763 aa19.96■□□□□ 0.79
RPS28-203ENST00000600659 SUCLG2Q96I99 432 aa19.96■□□□□ 0.79
RPS28-203ENST00000600659 POLLQ9UGP5 575 aa19.96■□□□□ 0.79
RPS28-203ENST00000600659 BCAR3O75815 825 aa19.95■□□□□ 0.78
RPS28-203ENST00000600659 DDNO94850 711 aaPredicted RBP19.95■□□□□ 0.78
RPS28-203ENST00000600659 ITGA6P23229 1130 aa19.95■□□□□ 0.78
RPS28-203ENST00000600659 KIAA2012Q0VF49 1180 aa19.95■□□□□ 0.78
RPS28-203ENST00000600659 ANKRD18AQ8IVF6 992 aa19.95■□□□□ 0.78
RPS28-203ENST00000600659 PODXL2Q9NZ53 605 aa19.95■□□□□ 0.78
RPS28-203ENST00000600659 ZNF646O15015 1829 aaPredicted RBP19.95■□□□□ 0.78
RPS28-203ENST00000600659 PSME4Q14997 1843 aa19.94■□□□□ 0.78
RPS28-203ENST00000600659 PPIP5K2O43314 1243 aa19.94■□□□□ 0.78
RPS28-203ENST00000600659 LARGE2Q8N3Y3 721 aa19.94■□□□□ 0.78
RPS28-203ENST00000600659 CDC5LQ99459 802 aaKnown RBP19.94■□□□□ 0.78
RPS28-203ENST00000600659 VPS33BQ9H267 617 aa19.94■□□□□ 0.78
RPS28-203ENST00000600659 RRAGCQ9HB90 399 aa19.94■□□□□ 0.78
RPS28-203ENST00000600659 KIF16BQ96L93 1317 aa19.94■□□□□ 0.78
RPS28-203ENST00000600659 C1QTNF8P60827 252 aa19.93■□□□□ 0.78
RPS28-203ENST00000600659 SUPT20HQ8NEM7 779 aa19.93■□□□□ 0.78
RPS28-203ENST00000600659 L3MBTL3Q96JM7 780 aaPredicted RBP19.93■□□□□ 0.78
RPS28-203ENST00000600659 GPR101Q96P66 508 aaPredicted RBP19.93■□□□□ 0.78
RPS28-203ENST00000600659 USP44Q9H0E7 712 aa19.93■□□□□ 0.78
RPS28-203ENST00000600659 TMX4Q9H1E5 349 aaPredicted RBP19.93■□□□□ 0.78
RPS28-203ENST00000600659 BSDC1Q9NW68 430 aaPredicted RBP19.93■□□□□ 0.78
RPS28-203ENST00000600659 C9orf78Q9NZ63 289 aaPredicted RBP19.93■□□□□ 0.78
RPS28-203ENST00000600659 NSFL1CQ9UNZ2 370 aaKnown RBP19.93■□□□□ 0.78
RPS28-203ENST00000600659 TNNQ9UQP3 1299 aa19.93■□□□□ 0.78
RPS28-203ENST00000600659 ADAMTSL1Q8N6G6 1762 aa19.92■□□□□ 0.78
RPS28-203ENST00000600659 LMBR1LQ6UX01 489 aa19.92■□□□□ 0.78
RPS28-203ENST00000600659 TBC1D16Q8TBP0 767 aa19.92■□□□□ 0.78
RPS28-203ENST00000600659 ARHGAP45Q92619 1136 aa19.92■□□□□ 0.78
RPS28-203ENST00000600659 WTIPA6NIX2 430 aaPredicted RBP19.91■□□□□ 0.78
RPS28-203ENST00000600659 RABL6Q3YEC7 729 aaPredicted RBP19.91■□□□□ 0.78
RPS28-203ENST00000600659 DPY19L2Q6NUT2 758 aa19.91■□□□□ 0.78
RPS28-203ENST00000600659 ANKRD44Q8N8A2 993 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms