RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 GRAPLQ8TC17 118 aaPredicted RBP11.45□□□□□ -0.58
ARHGEF1-215ENST00000598444 CHMP4AQ9BY43 222 aa11.45□□□□□ -0.58
ARHGEF1-215ENST00000598444 VPS33BQ9H267 617 aa11.45□□□□□ -0.58
ARHGEF1-215ENST00000598444 MYH3P11055 1940 aa11.45□□□□□ -0.58
ARHGEF1-215ENST00000598444 TRPM7Q96QT4 1865 aa11.44□□□□□ -0.58
ARHGEF1-215ENST00000598444 ANP32CO43423 234 aa11.44□□□□□ -0.58
ARHGEF1-215ENST00000598444 LMOD1P29536 600 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF1-215ENST00000598444 CCDC30Q5VVM6 783 aa11.44□□□□□ -0.58
ARHGEF1-215ENST00000598444 TSPYL6Q8N831 410 aa11.44□□□□□ -0.58
ARHGEF1-215ENST00000598444 RTFDC1Q9BY42 306 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF1-215ENST00000598444 ADAMTSL1Q8N6G6 1762 aa11.44□□□□□ -0.58
ARHGEF1-215ENST00000598444 LTBP1Q14766 1721 aa11.43□□□□□ -0.58
ARHGEF1-215ENST00000598444 IRS4O14654 1257 aaPredicted RBP11.43□□□□□ -0.58
ARHGEF1-215ENST00000598444 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
ARHGEF1-215ENST00000598444 SF3B3Q15393 1217 aaKnown RBP11.43□□□□□ -0.58
ARHGEF1-215ENST00000598444 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
ARHGEF1-215ENST00000598444 IFFO2Q5TF58 517 aa11.43□□□□□ -0.58
ARHGEF1-215ENST00000598444 TMC4Q7Z404 712 aa11.43□□□□□ -0.58
ARHGEF1-215ENST00000598444 WWC1Q8IX03 1113 aa11.43□□□□□ -0.58
ARHGEF1-215ENST00000598444 TSR2Q969E8 191 aaKnown RBP11.43□□□□□ -0.58
ARHGEF1-215ENST00000598444 MYD88Q99836 296 aa11.43□□□□□ -0.58
ARHGEF1-215ENST00000598444 MRS2Q9HD23 443 aa11.43□□□□□ -0.58
ARHGEF1-215ENST00000598444 CREBZFQ9NS37 354 aa11.43□□□□□ -0.58
ARHGEF1-215ENST00000598444 ZNRF3Q9ULT6 936 aa11.43□□□□□ -0.58
ARHGEF1-215ENST00000598444 PASKQ96RG2 1323 aa11.42□□□□□ -0.58
ARHGEF1-215ENST00000598444 DDX58O95786 925 aaKnown RBP11.42□□□□□ -0.58
ARHGEF1-215ENST00000598444 EPS15P42566 896 aa11.42□□□□□ -0.58
ARHGEF1-215ENST00000598444 CXCL9Q07325 125 aa11.42□□□□□ -0.58
ARHGEF1-215ENST00000598444 MAP1SQ66K74 1059 aaPredicted RBP11.42□□□□□ -0.58
ARHGEF1-215ENST00000598444 CNTROBQ8N137 903 aa11.42□□□□□ -0.58
ARHGEF1-215ENST00000598444 ZBTB38Q8NAP3 1195 aaPredicted RBP11.42□□□□□ -0.58
ARHGEF1-215ENST00000598444 CELF1Q92879 486 aaKnown RBP11.42□□□□□ -0.58
ARHGEF1-215ENST00000598444 LRRC37AA6NMS7 1700 aa11.42□□□□□ -0.58
ARHGEF1-215ENST00000598444 HSP90B1P14625 803 aaKnown RBP11.41□□□□□ -0.58
ARHGEF1-215ENST00000598444 SCNN1DP51172 638 aa11.41□□□□□ -0.58
ARHGEF1-215ENST00000598444 RPS8P62241 208 aaKnown RBP11.41□□□□□ -0.58
ARHGEF1-215ENST00000598444 KIAA2012Q0VF49 1180 aa11.41□□□□□ -0.58
ARHGEF1-215ENST00000598444 CCDC191Q8NCU4 936 aa11.41□□□□□ -0.58
ARHGEF1-215ENST00000598444 JARID2Q92833 1246 aaPredicted RBP11.41□□□□□ -0.58
ARHGEF1-215ENST00000598444 METTL22Q9BUU2 404 aaPredicted RBP11.41□□□□□ -0.58
ARHGEF1-215ENST00000598444 STK31Q9BXU1 1019 aa11.41□□□□□ -0.58
ARHGEF1-215ENST00000598444 MKRN1Q9UHC7 482 aaKnown RBP11.41□□□□□ -0.58
ARHGEF1-215ENST00000598444 NSFL1CQ9UNZ2 370 aaKnown RBP11.41□□□□□ -0.58
ARHGEF1-215ENST00000598444 SALL2Q9Y467 1007 aaPredicted RBP11.41□□□□□ -0.58
ARHGEF1-215ENST00000598444 SPEF2Q9C093 1822 aa11.4□□□□□ -0.58
ARHGEF1-215ENST00000598444 TMEM88BA6NKF7 163 aa11.4□□□□□ -0.58
ARHGEF1-215ENST00000598444 RAD17O75943 681 aa11.4□□□□□ -0.58
ARHGEF1-215ENST00000598444 PCCAP05165 728 aaPredicted RBP11.4□□□□□ -0.58
ARHGEF1-215ENST00000598444 WASHC4Q2M389 1173 aa11.4□□□□□ -0.58
ARHGEF1-215ENST00000598444 TWISTNBQ3B726 338 aaPredicted RBP11.4□□□□□ -0.58
ARHGEF1-215ENST00000598444 CIAPIN1Q6FI81 312 aa11.4□□□□□ -0.58
ARHGEF1-215ENST00000598444 CWC25Q9NXE8 425 aaPredicted RBP11.4□□□□□ -0.58
ARHGEF1-215ENST00000598444 MAP3K2Q9Y2U5 619 aa11.4□□□□□ -0.58
ARHGEF1-215ENST00000598444 COL4A1P02462 1669 aa11.4□□□□□ -0.59
ARHGEF1-215ENST00000598444 IL16Q14005 1332 aa11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 PI4KAP2A4QPH2 592 aa11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 C6orf229H3BNL8 230 aa11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 RIMBP2O15034 1052 aa11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 PDE8AO60658 829 aa11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 GPSM2P81274 684 aa11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 TNIP1Q15025 636 aa11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 NCBP3Q53F19 620 aaKnown RBP11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 KSR2Q6VAB6 950 aa11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 USP50Q70EL3 339 aaPredicted RBP11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 PI4KAP1Q8N8J0 262 aa11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 BCL2L13Q9BXK5 485 aa11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 SEC31BQ9NQW1 1179 aa11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 GPRC5DQ9NZD1 345 aa11.39□□□□□ -0.59
ARHGEF1-215ENST00000598444 DUOX1Q9NRD9 1551 aa11.38□□□□□ -0.59
ARHGEF1-215ENST00000598444 YDJCA8MPS7 323 aa11.38□□□□□ -0.59
ARHGEF1-215ENST00000598444 SLC4A2P04920 1241 aa11.38□□□□□ -0.59
ARHGEF1-215ENST00000598444 GMPSP49915 693 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF1-215ENST00000598444 CCDC152Q4G0S7 254 aa11.38□□□□□ -0.59
ARHGEF1-215ENST00000598444 G2E3Q7L622 706 aa11.38□□□□□ -0.59
ARHGEF1-215ENST00000598444 ADARB2Q9NS39 739 aaKnown RBP11.38□□□□□ -0.59
ARHGEF1-215ENST00000598444 POLLQ9UGP5 575 aa11.38□□□□□ -0.59
ARHGEF1-215ENST00000598444 SCN9AQ15858 1988 aa11.37□□□□□ -0.59
ARHGEF1-215ENST00000598444 IGKV5-2P06315 115 aa11.37□□□□□ -0.59
ARHGEF1-215ENST00000598444 HSPA1AP0DMV8 641 aaKnown RBP11.37□□□□□ -0.59
ARHGEF1-215ENST00000598444 HSPA1BP0DMV9 641 aaKnown RBP11.37□□□□□ -0.59
ARHGEF1-215ENST00000598444 NEXNQ0ZGT2 675 aa11.37□□□□□ -0.59
ARHGEF1-215ENST00000598444 WDR63Q8IWG1 891 aa11.37□□□□□ -0.59
ARHGEF1-215ENST00000598444 CCDC85AQ96PX6 553 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF1-215ENST00000598444 EYA3Q99504 573 aa11.37□□□□□ -0.59
ARHGEF1-215ENST00000598444 DBNDD1Q9H9R9 158 aa11.37□□□□□ -0.59
ARHGEF1-215ENST00000598444 CNOT7Q9UIV1 285 aaKnown RBP11.37□□□□□ -0.59
ARHGEF1-215ENST00000598444 CNTNAP1P78357 1384 aa11.37□□□□□ -0.59
ARHGEF1-215ENST00000598444 VEGFBP49765 207 aa11.36□□□□□ -0.59
ARHGEF1-215ENST00000598444 FMR1Q06787 632 aaKnown RBP eCLIP11.36□□□□□ -0.597e-7■■■□□ 16.3
ARHGEF1-215ENST00000598444 DOK7Q18PE1 504 aa11.36□□□□□ -0.59
ARHGEF1-215ENST00000598444 CWF19L2Q2TBE0 894 aaKnown RBP11.36□□□□□ -0.59
ARHGEF1-215ENST00000598444 DEFB115Q30KQ5 88 aa11.36□□□□□ -0.59
ARHGEF1-215ENST00000598444 COL13A1Q5TAT6 717 aaPredicted RBP11.36□□□□□ -0.59
ARHGEF1-215ENST00000598444 FAM9BQ8IZU0 186 aa11.36□□□□□ -0.59
ARHGEF1-215ENST00000598444 TBC1D16Q8TBP0 767 aa11.36□□□□□ -0.59
ARHGEF1-215ENST00000598444 GPR101Q96P66 508 aaPredicted RBP11.36□□□□□ -0.59
ARHGEF1-215ENST00000598444 ZC3H12CQ9C0D7 883 aaKnown RBP11.36□□□□□ -0.59
ARHGEF1-215ENST00000598444 ANKIB1Q9P2G1 1089 aa11.36□□□□□ -0.59
ARHGEF1-215ENST00000598444 CDHR2Q9BYE9 1310 aa11.35□□□□□ -0.59
ARHGEF1-215ENST00000598444 PSME4Q14997 1843 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms