RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 RTL5Q5HYW3 569 aaPredicted RBP19.72■□□□□ 0.75
XRCC1-206ENST00000597811 MYD88Q99836 296 aa19.72■□□□□ 0.75
XRCC1-206ENST00000597811 FKBP5Q13451 457 aaPredicted RBP19.71■□□□□ 0.75
XRCC1-206ENST00000597811 GRAPQ13588 217 aa19.71■□□□□ 0.75
XRCC1-206ENST00000597811 DDX46Q7L014 1031 aaKnown RBP19.71■□□□□ 0.75
XRCC1-206ENST00000597811 GRAPLQ8TC17 118 aaPredicted RBP19.71■□□□□ 0.75
XRCC1-206ENST00000597811 MAP3K2Q9Y2U5 619 aa19.71■□□□□ 0.75
XRCC1-206ENST00000597811 BBOX1O75936 387 aa19.7■□□□□ 0.74
XRCC1-206ENST00000597811 POTEIP0CG38 1075 aa19.7■□□□□ 0.74
XRCC1-206ENST00000597811 POTEJP0CG39 1038 aa19.7■□□□□ 0.74
XRCC1-206ENST00000597811 G2E3Q7L622 706 aa19.7■□□□□ 0.74
XRCC1-206ENST00000597811 DNAJC5GQ8N7S2 189 aa19.7■□□□□ 0.74
XRCC1-206ENST00000597811 JDP2Q8WYK2 163 aa19.7■□□□□ 0.74
XRCC1-206ENST00000597811 MYH3P11055 1940 aa19.7■□□□□ 0.74
XRCC1-206ENST00000597811 DUOX1Q9NRD9 1551 aa19.7■□□□□ 0.74
XRCC1-206ENST00000597811 LTBP1Q14766 1721 aa19.69■□□□□ 0.74
XRCC1-206ENST00000597811 PI4KAP2A4QPH2 592 aa19.69■□□□□ 0.74
XRCC1-206ENST00000597811 IQCA1LA6NCM1 817 aa19.69■□□□□ 0.74
XRCC1-206ENST00000597811 NEXNQ0ZGT2 675 aa19.69■□□□□ 0.74
XRCC1-206ENST00000597811 FLIIQ13045 1269 aa19.69■□□□□ 0.74
XRCC1-206ENST00000597811 SF3B3Q15393 1217 aaKnown RBP19.69■□□□□ 0.74
XRCC1-206ENST00000597811 KSR2Q6VAB6 950 aa19.69■□□□□ 0.74
XRCC1-206ENST00000597811 SP8Q8IXZ3 490 aa19.69■□□□□ 0.74
XRCC1-206ENST00000597811 LARGE2Q8N3Y3 721 aa19.69■□□□□ 0.74
XRCC1-206ENST00000597811 PI4KAP1Q8N8J0 262 aa19.69■□□□□ 0.74
XRCC1-206ENST00000597811 TMX4Q9H1E5 349 aaPredicted RBP19.69■□□□□ 0.74
XRCC1-206ENST00000597811 ADAMTSL1Q8N6G6 1762 aa19.69■□□□□ 0.74
XRCC1-206ENST00000597811 IRS4O14654 1257 aaPredicted RBP19.68■□□□□ 0.74
XRCC1-206ENST00000597811 ZBTB38Q8NAP3 1195 aaPredicted RBP19.68■□□□□ 0.74
XRCC1-206ENST00000597811 METTL22Q9BUU2 404 aaPredicted RBP19.68■□□□□ 0.74
XRCC1-206ENST00000597811 TAF1DQ9H5J8 278 aaPredicted RBP19.68■□□□□ 0.74
XRCC1-206ENST00000597811 PPIP5K2O43314 1243 aa19.67■□□□□ 0.74
XRCC1-206ENST00000597811 AOC3Q16853 763 aa19.67■□□□□ 0.74
XRCC1-206ENST00000597811 GPC2Q8N158 579 aa19.67■□□□□ 0.74
XRCC1-206ENST00000597811 CCDC191Q8NCU4 936 aa19.67■□□□□ 0.74
XRCC1-206ENST00000597811 RTFDC1Q9BY42 306 aaPredicted RBP19.67■□□□□ 0.74
XRCC1-206ENST00000597811 EIF6P56537 245 aaKnown RBP19.66■□□□□ 0.74
XRCC1-206ENST00000597811 CHADLQ6NUI6 762 aa19.66■□□□□ 0.74
XRCC1-206ENST00000597811 DPP8Q6V1X1 898 aaPredicted RBP19.66■□□□□ 0.74
XRCC1-206ENST00000597811 MPNDQ8N594 471 aa19.66■□□□□ 0.74
XRCC1-206ENST00000597811 CELF1Q92879 486 aaKnown RBP19.66■□□□□ 0.74
XRCC1-206ENST00000597811 NIM1KQ8IY84 436 aa19.65■□□□□ 0.74
XRCC1-206ENST00000597811 CWC25Q9NXE8 425 aaPredicted RBP19.65■□□□□ 0.74
XRCC1-206ENST00000597811 HACL1Q9UJ83 578 aa19.65■□□□□ 0.74
XRCC1-206ENST00000597811 GJA3Q9Y6H8 435 aa19.65■□□□□ 0.74
XRCC1-206ENST00000597811 PCCAP05165 728 aaPredicted RBP19.64■□□□□ 0.73
XRCC1-206ENST00000597811 TMC4Q7Z404 712 aa19.64■□□□□ 0.73
XRCC1-206ENST00000597811 SUPT20HQ8NEM7 779 aa19.64■□□□□ 0.73
XRCC1-206ENST00000597811 JARID2Q92833 1246 aaPredicted RBP19.64■□□□□ 0.73
XRCC1-206ENST00000597811 VPS33BQ9H267 617 aa19.64■□□□□ 0.73
XRCC1-206ENST00000597811 SPEF2Q9C093 1822 aa19.64■□□□□ 0.73
XRCC1-206ENST00000597811 IGKV5-2P06315 115 aa19.63■□□□□ 0.73
XRCC1-206ENST00000597811 EPHX2P34913 555 aa19.63■□□□□ 0.73
XRCC1-206ENST00000597811 LDHDQ86WU2 507 aa19.63■□□□□ 0.73
XRCC1-206ENST00000597811 BCL2L13Q9BXK5 485 aa19.63■□□□□ 0.73
XRCC1-206ENST00000597811 EAPPQ56P03 285 aaPredicted RBP19.62■□□□□ 0.73
XRCC1-206ENST00000597811 DNAAF4Q8WXU2 420 aa19.62■□□□□ 0.73
XRCC1-206ENST00000597811 KLRG1Q96E93 195 aa19.62■□□□□ 0.73
XRCC1-206ENST00000597811 SCNN1DP51172 638 aa19.61■□□□□ 0.73
XRCC1-206ENST00000597811 KIAA2012Q0VF49 1180 aa19.61■□□□□ 0.73
XRCC1-206ENST00000597811 CWF19L2Q2TBE0 894 aaKnown RBP19.61■□□□□ 0.73
XRCC1-206ENST00000597811 TRMT2AQ8IZ69 625 aaKnown RBP19.61■□□□□ 0.73
XRCC1-206ENST00000597811 SEC31BQ9NQW1 1179 aa19.61■□□□□ 0.73
XRCC1-206ENST00000597811 SMC4Q9NTJ3 1288 aa19.61■□□□□ 0.73
XRCC1-206ENST00000597811 F6X3S4 739 aa19.6■□□□□ 0.73
XRCC1-206ENST00000597811 PDE8AO60658 829 aa19.6■□□□□ 0.73
XRCC1-206ENST00000597811 HSP90B1P14625 803 aaKnown RBP19.6■□□□□ 0.73
XRCC1-206ENST00000597811 SLC4A10Q6U841 1118 aa19.6■□□□□ 0.73
XRCC1-206ENST00000597811 ZNRF3Q9ULT6 936 aa19.6■□□□□ 0.73
XRCC1-206ENST00000597811 CDHR2Q9BYE9 1310 aa19.59■□□□□ 0.73
XRCC1-206ENST00000597811 RPS8P62241 208 aaKnown RBP19.59■□□□□ 0.73
XRCC1-206ENST00000597811 GPSM2P81274 684 aa19.59■□□□□ 0.73
XRCC1-206ENST00000597811 CXCL9Q07325 125 aa19.59■□□□□ 0.73
XRCC1-206ENST00000597811 PNMA8AQ86V59 439 aaPredicted RBP19.59■□□□□ 0.73
XRCC1-206ENST00000597811 MRPL50Q8N5N7 158 aaKnown RBP19.59■□□□□ 0.73
XRCC1-206ENST00000597811 SSH1Q8WYL5 1049 aa19.59■□□□□ 0.73
XRCC1-206ENST00000597811 CCDC85AQ96PX6 553 aaPredicted RBP19.59■□□□□ 0.73
XRCC1-206ENST00000597811 NSFL1CQ9UNZ2 370 aaKnown RBP19.59■□□□□ 0.73
XRCC1-206ENST00000597811 PASKQ96RG2 1323 aa19.58■□□□□ 0.73
XRCC1-206ENST00000597811 NEURL1BA8MQ27 555 aa19.58■□□□□ 0.72
XRCC1-206ENST00000597811 CT47B1P0C2W7 299 aaPredicted RBP19.58■□□□□ 0.72
XRCC1-206ENST00000597811 LMOD1P29536 600 aaPredicted RBP19.58■□□□□ 0.72
XRCC1-206ENST00000597811 EPS15P42566 896 aa19.58■□□□□ 0.72
XRCC1-206ENST00000597811 CCDC152Q4G0S7 254 aa19.58■□□□□ 0.72
XRCC1-206ENST00000597811 SCN9AQ15858 1988 aa19.57■□□□□ 0.72
XRCC1-206ENST00000597811 ZBED9Q6R2W3 1325 aa19.57■□□□□ 0.72
XRCC1-206ENST00000597811 ALDH1L2Q3SY69 923 aa19.57■□□□□ 0.72
XRCC1-206ENST00000597811 POLLQ9UGP5 575 aa19.57■□□□□ 0.72
XRCC1-206ENST00000597811 CLEC11AQ9Y240 323 aa19.57■□□□□ 0.72
XRCC1-206ENST00000597811 YDJCA8MPS7 323 aa19.56■□□□□ 0.72
XRCC1-206ENST00000597811 ITGBL1O95965 494 aaPredicted RBP19.56■□□□□ 0.72
XRCC1-206ENST00000597811 LINS1Q8NG48 757 aa19.56■□□□□ 0.72
XRCC1-206ENST00000597811 RAD17O75943 681 aa19.55■□□□□ 0.72
XRCC1-206ENST00000597811 CTSWP56202 376 aa19.55■□□□□ 0.72
XRCC1-206ENST00000597811 WASHC4Q2M389 1173 aa19.55■□□□□ 0.72
XRCC1-206ENST00000597811 MAP1SQ66K74 1059 aaPredicted RBP19.55■□□□□ 0.72
XRCC1-206ENST00000597811 UBE3BQ7Z3V4 1068 aa19.55■□□□□ 0.72
XRCC1-206ENST00000597811 JMYQ8N9B5 988 aa19.55■□□□□ 0.72
XRCC1-206ENST00000597811 TRPM7Q96QT4 1865 aa19.54■□□□□ 0.72
XRCC1-206ENST00000597811 PSME4Q14997 1843 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms