RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 TMX4Q9H1E5 349 aaPredicted RBP17.84■□□□□ 0.45
APOC1-208ENST00000592535 PI4KAP2A4QPH2 592 aa17.83■□□□□ 0.44
APOC1-208ENST00000592535 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
APOC1-208ENST00000592535 LARGE2Q8N3Y3 721 aa17.83■□□□□ 0.44
APOC1-208ENST00000592535 PI4KAP1Q8N8J0 262 aa17.83■□□□□ 0.44
APOC1-208ENST00000592535 JDP2Q8WYK2 163 aa17.83■□□□□ 0.44
APOC1-208ENST00000592535 L3MBTL3Q96JM7 780 aaPredicted RBP17.83■□□□□ 0.44
APOC1-208ENST00000592535 CWC25Q9NXE8 425 aaPredicted RBP17.83■□□□□ 0.44
APOC1-208ENST00000592535 VAMP4O75379 141 aa17.82■□□□□ 0.44
APOC1-208ENST00000592535 PCCAP05165 728 aaPredicted RBP17.82■□□□□ 0.44
APOC1-208ENST00000592535 JARID2Q92833 1246 aaPredicted RBP17.82■□□□□ 0.44
APOC1-208ENST00000592535 CELF1Q92879 486 aaKnown RBP17.82■□□□□ 0.44
APOC1-208ENST00000592535 PPIP5K2O43314 1243 aa17.81■□□□□ 0.44
APOC1-208ENST00000592535 IGKV5-2P06315 115 aa17.81■□□□□ 0.44
APOC1-208ENST00000592535 AOC3Q16853 763 aa17.81■□□□□ 0.44
APOC1-208ENST00000592535 DPP8Q6V1X1 898 aaPredicted RBP17.81■□□□□ 0.44
APOC1-208ENST00000592535 MPNDQ8N594 471 aa17.81■□□□□ 0.44
APOC1-208ENST00000592535 RTFDC1Q9BY42 306 aaPredicted RBP17.81■□□□□ 0.44
APOC1-208ENST00000592535 DUOX1Q9NRD9 1551 aa17.81■□□□□ 0.44
APOC1-208ENST00000592535 MYH3P11055 1940 aa17.8■□□□□ 0.44
APOC1-208ENST00000592535 IQCA1LA6NCM1 817 aa17.8■□□□□ 0.44
APOC1-208ENST00000592535 POTEIP0CG38 1075 aa17.8■□□□□ 0.44
APOC1-208ENST00000592535 POTEJP0CG39 1038 aa17.8■□□□□ 0.44
APOC1-208ENST00000592535 TMC4Q7Z404 712 aa17.8■□□□□ 0.44
APOC1-208ENST00000592535 SUPT20HQ8NEM7 779 aa17.8■□□□□ 0.44
APOC1-208ENST00000592535 EIF6P56537 245 aaKnown RBP17.79■□□□□ 0.44
APOC1-208ENST00000592535 HTRA3P83110 453 aa17.79■□□□□ 0.44
APOC1-208ENST00000592535 FLIIQ13045 1269 aa17.79■□□□□ 0.44
APOC1-208ENST00000592535 NIM1KQ8IY84 436 aa17.79■□□□□ 0.44
APOC1-208ENST00000592535 GPC2Q8N158 579 aa17.79■□□□□ 0.44
APOC1-208ENST00000592535 TAF1DQ9H5J8 278 aaPredicted RBP17.79■□□□□ 0.44
APOC1-208ENST00000592535 MYH16Q9H6N6 1097 aa17.79■□□□□ 0.44
APOC1-208ENST00000592535 LTBP1Q14766 1721 aa17.78■□□□□ 0.44
APOC1-208ENST00000592535 ZNF521Q96K83 1311 aa17.78■□□□□ 0.44
APOC1-208ENST00000592535 PDE8AO60658 829 aa17.78■□□□□ 0.44
APOC1-208ENST00000592535 HSP90B1P14625 803 aaKnown RBP17.78■□□□□ 0.44
APOC1-208ENST00000592535 NEXNQ0ZGT2 675 aa17.78■□□□□ 0.44
APOC1-208ENST00000592535 CWF19L2Q2TBE0 894 aaKnown RBP17.78■□□□□ 0.44
APOC1-208ENST00000592535 VPS33BQ9H267 617 aa17.78■□□□□ 0.44
APOC1-208ENST00000592535 HACL1Q9UJ83 578 aa17.78■□□□□ 0.44
APOC1-208ENST00000592535 GJA3Q9Y6H8 435 aa17.78■□□□□ 0.44
APOC1-208ENST00000592535 CDHR2Q9BYE9 1310 aa17.77■□□□□ 0.44
APOC1-208ENST00000592535 ADAMTSL1Q8N6G6 1762 aa17.77■□□□□ 0.44
APOC1-208ENST00000592535 NEURL1BA8MQ27 555 aa17.77■□□□□ 0.44
APOC1-208ENST00000592535 FKBP5Q13451 457 aaPredicted RBP17.77■□□□□ 0.44
APOC1-208ENST00000592535 SEC31BQ9NQW1 1179 aa17.77■□□□□ 0.44
APOC1-208ENST00000592535 CEP350Q5VT06 3117 aa17.76■□□□□ 0.43
APOC1-208ENST00000592535 RPS8P62241 208 aaKnown RBP17.76■□□□□ 0.43
APOC1-208ENST00000592535 KIAA2012Q0VF49 1180 aa17.76■□□□□ 0.43
APOC1-208ENST00000592535 CHADLQ6NUI6 762 aa17.76■□□□□ 0.43
APOC1-208ENST00000592535 CCDC85AQ96PX6 553 aaPredicted RBP17.76■□□□□ 0.43
APOC1-208ENST00000592535 SPEF2Q9C093 1822 aa17.76■□□□□ 0.43
APOC1-208ENST00000592535 EPHX2P34913 555 aa17.75■□□□□ 0.43
APOC1-208ENST00000592535 GPSM2P81274 684 aa17.75■□□□□ 0.43
APOC1-208ENST00000592535 CCDC152Q4G0S7 254 aa17.75■□□□□ 0.43
APOC1-208ENST00000592535 DNAJC5GQ8N7S2 189 aa17.75■□□□□ 0.43
APOC1-208ENST00000592535 DNAAF4Q8WXU2 420 aa17.75■□□□□ 0.43
APOC1-208ENST00000592535 NSFL1CQ9UNZ2 370 aaKnown RBP17.75■□□□□ 0.43
APOC1-208ENST00000592535 EAPPQ56P03 285 aaPredicted RBP17.74■□□□□ 0.43
APOC1-208ENST00000592535 LDHDQ86WU2 507 aa17.74■□□□□ 0.43
APOC1-208ENST00000592535 ZNRF3Q9ULT6 936 aa17.74■□□□□ 0.43
APOC1-208ENST00000592535 SCNN1DP51172 638 aa17.73■□□□□ 0.43
APOC1-208ENST00000592535 CTSWP56202 376 aa17.73■□□□□ 0.43
APOC1-208ENST00000592535 CXCL9Q07325 125 aa17.73■□□□□ 0.43
APOC1-208ENST00000592535 UBE3BQ7Z3V4 1068 aa17.73■□□□□ 0.43
APOC1-208ENST00000592535 H7C1W4 665 aa17.72■□□□□ 0.43
APOC1-208ENST00000592535 GCKRQ14397 625 aa17.72■□□□□ 0.43
APOC1-208ENST00000592535 POLLQ9UGP5 575 aa17.72■□□□□ 0.43
APOC1-208ENST00000592535 F6X3S4 739 aa17.71■□□□□ 0.43
APOC1-208ENST00000592535 C6orf229H3BNL8 230 aa17.71■□□□□ 0.43
APOC1-208ENST00000592535 RIMBP2O15034 1052 aa17.71■□□□□ 0.43
APOC1-208ENST00000592535 LMOD1P29536 600 aaPredicted RBP17.71■□□□□ 0.43
APOC1-208ENST00000592535 EPS15P42566 896 aa17.71■□□□□ 0.43
APOC1-208ENST00000592535 WASHC4Q2M389 1173 aa17.71■□□□□ 0.43
APOC1-208ENST00000592535 PNMA8AQ86V59 439 aaPredicted RBP17.71■□□□□ 0.43
APOC1-208ENST00000592535 LINS1Q8NG48 757 aa17.71■□□□□ 0.43
APOC1-208ENST00000592535 TTLL11Q8NHH1 800 aa17.71■□□□□ 0.43
APOC1-208ENST00000592535 GPR101Q96P66 508 aaPredicted RBP17.71■□□□□ 0.43
APOC1-208ENST00000592535 CLEC11AQ9Y240 323 aa17.71■□□□□ 0.43
APOC1-208ENST00000592535 YDJCA8MPS7 323 aa17.7■□□□□ 0.42
APOC1-208ENST00000592535 CCER2I3L3R5 266 aa17.7■□□□□ 0.42
APOC1-208ENST00000592535 CASP7P55210 303 aa17.7■□□□□ 0.42
APOC1-208ENST00000592535 CIAPIN1Q6FI81 312 aa17.7■□□□□ 0.42
APOC1-208ENST00000592535 ANKRD18AQ8IVF6 992 aa17.7■□□□□ 0.42
APOC1-208ENST00000592535 TBC1D16Q8TBP0 767 aa17.7■□□□□ 0.42
APOC1-208ENST00000592535 GREM2Q9H772 168 aa17.7■□□□□ 0.42
APOC1-208ENST00000592535 RAD17O75943 681 aa17.69■□□□□ 0.42
APOC1-208ENST00000592535 KLRG1Q96E93 195 aa17.69■□□□□ 0.42
APOC1-208ENST00000592535 DBNDD1Q9H9R9 158 aa17.69■□□□□ 0.42
APOC1-208ENST00000592535 PODXL2Q9NZ53 605 aa17.69■□□□□ 0.42
APOC1-208ENST00000592535 RTL9Q8NET4 1388 aa17.68■□□□□ 0.42
APOC1-208ENST00000592535 GMPSP49915 693 aaPredicted RBP17.68■□□□□ 0.42
APOC1-208ENST00000592535 BEND3Q5T5X7 828 aa17.68■□□□□ 0.42
APOC1-208ENST00000592535 CDC5LQ99459 802 aaKnown RBP17.68■□□□□ 0.42
APOC1-208ENST00000592535 EYA3Q99504 573 aa17.68■□□□□ 0.42
APOC1-208ENST00000592535 PLA2G12BQ9BX93 195 aa17.68■□□□□ 0.42
APOC1-208ENST00000592535 GPRC5DQ9NZD1 345 aa17.68■□□□□ 0.42
APOC1-208ENST00000592535 ANKIB1Q9P2G1 1089 aa17.68■□□□□ 0.42
APOC1-208ENST00000592535 PASKQ96RG2 1323 aa17.68■□□□□ 0.42
APOC1-208ENST00000592535 SCN9AQ15858 1988 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms