RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 MCM10Q7L590 875 aa17.78■□□□□ 0.44
CIRBP-228ENST00000590347 ZNF428Q96B54 188 aa17.78■□□□□ 0.44
CIRBP-228ENST00000590347 TTC14Q96N46 770 aa17.78■□□□□ 0.44
CIRBP-228ENST00000590347 ARGLU1Q9NWB6 273 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-228ENST00000590347 KIF13AQ9H1H9 1805 aa17.78■□□□□ 0.44
CIRBP-228ENST00000590347 FANCGO15287 622 aa17.78■□□□□ 0.44
CIRBP-228ENST00000590347 IBSPP21815 317 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-228ENST00000590347 MUM1L1Q5H9M0 696 aa17.78■□□□□ 0.44
CIRBP-228ENST00000590347 AGLP35573 1532 aa17.78■□□□□ 0.44
CIRBP-228ENST00000590347 TMEM2Q9UHN6 1383 aa17.77■□□□□ 0.44
CIRBP-228ENST00000590347 N4BP1O75113 896 aaKnown RBP17.77■□□□□ 0.43
CIRBP-228ENST00000590347 LARP1Q6PKG0 1096 aaKnown RBP17.77■□□□□ 0.43
CIRBP-228ENST00000590347 RABEP2Q9H5N1 569 aa17.77■□□□□ 0.43
CIRBP-228ENST00000590347 HMMRO75330 724 aa17.76■□□□□ 0.43
CIRBP-228ENST00000590347 NCAPGQ9BPX3 1015 aa17.76■□□□□ 0.43
CIRBP-228ENST00000590347 CLSTN2Q9H4D0 955 aa17.76■□□□□ 0.43
CIRBP-228ENST00000590347 GUCY2CP25092 1073 aa17.76■□□□□ 0.43
CIRBP-228ENST00000590347 FBXO18Q8NFZ0 1043 aa17.76■□□□□ 0.43
CIRBP-228ENST00000590347 COG3Q96JB2 828 aa17.76■□□□□ 0.43
CIRBP-228ENST00000590347 HYPKQ9NX55 129 aa17.76■□□□□ 0.43
CIRBP-228ENST00000590347 AMOTL2Q9Y2J4 779 aa17.76■□□□□ 0.43
CIRBP-228ENST00000590347 EID1Q9Y6B2 187 aa17.76■□□□□ 0.43
CIRBP-228ENST00000590347 BRPF1P55201 1214 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-228ENST00000590347 IQCB1Q15051 598 aa17.76■□□□□ 0.43
CIRBP-228ENST00000590347 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-228ENST00000590347 LEO1Q8WVC0 666 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-228ENST00000590347 SUGCTQ9HAC7 445 aa17.76■□□□□ 0.43
CIRBP-228ENST00000590347 CWC15Q9P013 229 aaKnown RBP17.76■□□□□ 0.43
CIRBP-228ENST00000590347 BIN1O00499 593 aa17.75■□□□□ 0.43
CIRBP-228ENST00000590347 PTH1RQ03431 593 aa17.75■□□□□ 0.43
CIRBP-228ENST00000590347 FCHSD2O94868 740 aa17.75■□□□□ 0.43
CIRBP-228ENST00000590347 YY1AP1Q9H869 796 aa17.75■□□□□ 0.43
CIRBP-228ENST00000590347 SPATA31D1Q6ZQQ2 1576 aa17.75■□□□□ 0.43
CIRBP-228ENST00000590347 A0A1B0GUL7 405 aa17.74■□□□□ 0.43
CIRBP-228ENST00000590347 CNPY4Q8N129 248 aa17.74■□□□□ 0.43
CIRBP-228ENST00000590347 GOLGA6L1Q8N7Z2 621 aa17.74■□□□□ 0.43
CIRBP-228ENST00000590347 NSD2O96028 1365 aa17.74■□□□□ 0.43
CIRBP-228ENST00000590347 TPCN1Q9ULQ1 816 aa17.74■□□□□ 0.43
CIRBP-228ENST00000590347 EIF3CLB5ME19 914 aaKnown RBP17.74■□□□□ 0.43
CIRBP-228ENST00000590347 ARMCX5Q6P1M9 558 aa17.74■□□□□ 0.43
CIRBP-228ENST00000590347 EIF3CQ99613 913 aaKnown RBP17.74■□□□□ 0.43
CIRBP-228ENST00000590347 HSP90AA4PQ58FG1 418 aa17.73■□□□□ 0.43
CIRBP-228ENST00000590347 CC2D1AQ6P1N0 951 aaPredicted RBP17.73■□□□□ 0.43
CIRBP-228ENST00000590347 AK7Q96M32 723 aa17.73■□□□□ 0.43
CIRBP-228ENST00000590347 L2HGDHQ9H9P8 463 aa17.73■□□□□ 0.43
CIRBP-228ENST00000590347 SRRTQ9BXP5 876 aaKnown RBP17.73■□□□□ 0.43
CIRBP-228ENST00000590347 NBPF6Q5VWK0 638 aa17.72■□□□□ 0.43
CIRBP-228ENST00000590347 LEKR1Q6ZMV7 388 aa17.72■□□□□ 0.43
CIRBP-228ENST00000590347 GOLGA5Q8TBA6 731 aa17.72■□□□□ 0.43
CIRBP-228ENST00000590347 NBPF4Q96M43 638 aa17.72■□□□□ 0.43
CIRBP-228ENST00000590347 PDE11AQ9HCR9 933 aa17.72■□□□□ 0.43
CIRBP-228ENST00000590347 IFNKQ9P0W0 207 aa17.72■□□□□ 0.43
CIRBP-228ENST00000590347 ACEP12821 1306 aa17.72■□□□□ 0.43
CIRBP-228ENST00000590347 JAK2O60674 1132 aa17.72■□□□□ 0.43
CIRBP-228ENST00000590347 CCDC93Q567U6 631 aa17.72■□□□□ 0.43
CIRBP-228ENST00000590347 C14orf37Q86TY3 774 aa17.72■□□□□ 0.43
CIRBP-228ENST00000590347 DEF6Q9H4E7 631 aa17.72■□□□□ 0.43
CIRBP-228ENST00000590347 OSBPL3Q9H4L5 887 aa17.72■□□□□ 0.43
CIRBP-228ENST00000590347 ACTN2P35609 894 aa17.71■□□□□ 0.43
CIRBP-228ENST00000590347 NBPF11Q86T75 865 aa17.71■□□□□ 0.43
CIRBP-228ENST00000590347 XPO4Q9C0E2 1151 aaKnown RBP17.71■□□□□ 0.43
CIRBP-228ENST00000590347 TAF6LQ9Y6J9 622 aa17.71■□□□□ 0.43
CIRBP-228ENST00000590347 BRD2P25440 801 aaKnown RBP17.71■□□□□ 0.43
CIRBP-228ENST00000590347 DDX19AQ9NUU7 478 aaKnown RBP17.71■□□□□ 0.43
CIRBP-228ENST00000590347 TFRCP02786 760 aaKnown RBP17.7■□□□□ 0.42
CIRBP-228ENST00000590347 RNF20Q5VTR2 975 aa17.7■□□□□ 0.42
CIRBP-228ENST00000590347 CREBRFQ8IUR6 639 aa17.7■□□□□ 0.42
CIRBP-228ENST00000590347 PATL2C9JE40 543 aaKnown RBP17.7■□□□□ 0.42
CIRBP-228ENST00000590347 TADA3O75528 432 aa17.7■□□□□ 0.42
CIRBP-228ENST00000590347 LSG1Q9H089 658 aaKnown RBP17.7■□□□□ 0.42
CIRBP-228ENST00000590347 SFPQP23246 707 aaKnown RBP eCLIP17.7■□□□□ 0.42
CIRBP-228ENST00000590347 DHX8Q14562 1220 aaKnown RBP17.7■□□□□ 0.42
CIRBP-228ENST00000590347 DHX40Q8IX18 779 aaKnown RBP17.7■□□□□ 0.42
CIRBP-228ENST00000590347 PARD6BQ9BYG5 372 aa17.7■□□□□ 0.42
CIRBP-228ENST00000590347 SGSM2O43147 1006 aa17.69■□□□□ 0.42
CIRBP-228ENST00000590347 ZNF853P0CG23 659 aa17.69■□□□□ 0.42
CIRBP-228ENST00000590347 MMP14P50281 582 aa17.69■□□□□ 0.42
CIRBP-228ENST00000590347 NGDNQ8NEJ9 315 aaKnown RBP17.69■□□□□ 0.42
CIRBP-228ENST00000590347 HSP90AB2PQ58FF8 381 aa17.69■□□□□ 0.42
CIRBP-228ENST00000590347 MICALL1Q8N3F8 863 aa17.69■□□□□ 0.42
CIRBP-228ENST00000590347 MRFAP1L1Q96HT8 127 aa17.69■□□□□ 0.42
CIRBP-228ENST00000590347 UTP14AQ9BVJ6 771 aaKnown RBP17.69■□□□□ 0.42
CIRBP-228ENST00000590347 ARFGAP3Q9NP61 516 aa17.69■□□□□ 0.42
CIRBP-228ENST00000590347 FAN1Q9Y2M0 1017 aa17.69■□□□□ 0.42
CIRBP-228ENST00000590347 ATP2B1P20020 1258 aa17.68■□□□□ 0.42
CIRBP-228ENST00000590347 RAB11FIP3O75154 756 aa17.68■□□□□ 0.42
CIRBP-228ENST00000590347 GUCY1B3Q02153 619 aa17.68■□□□□ 0.42
CIRBP-228ENST00000590347 PLEKHO1Q53GL0 409 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-228ENST00000590347 SIL1Q9H173 461 aa17.68■□□□□ 0.42
CIRBP-228ENST00000590347 GOLPH3LQ9H4A5 285 aa17.68■□□□□ 0.42
CIRBP-228ENST00000590347 LRRC7Q96NW7 1537 aa17.68■□□□□ 0.42
CIRBP-228ENST00000590347 PLEKHG2Q9H7P9 1386 aa17.68■□□□□ 0.42
CIRBP-228ENST00000590347 NPHP3Q7Z494 1330 aa17.68■□□□□ 0.42
CIRBP-228ENST00000590347 GNAI2P04899 355 aa17.67■□□□□ 0.42
CIRBP-228ENST00000590347 ETF1P62495 437 aaKnown RBP17.67■□□□□ 0.42
CIRBP-228ENST00000590347 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
CIRBP-228ENST00000590347 CCDC30Q5VVM6 783 aa17.67■□□□□ 0.42
CIRBP-228ENST00000590347 CYP46A1Q9Y6A2 500 aa17.67■□□□□ 0.42
CIRBP-228ENST00000590347 LMOD1P29536 600 aaPredicted RBP17.67■□□□□ 0.42
CIRBP-228ENST00000590347 SALL3Q9BXA9 1300 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms