RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 TMX4Q9H1E5 349 aaPredicted RBP17.67■□□□□ 0.42
NEDD4L-228ENST00000590248 SCN4AP35499 1836 aa17.67■□□□□ 0.42
NEDD4L-228ENST00000590248 VAMP4O75379 141 aa17.66■□□□□ 0.42
NEDD4L-228ENST00000590248 SF3B3Q15393 1217 aaKnown RBP17.66■□□□□ 0.42
NEDD4L-228ENST00000590248 KSR2Q6VAB6 950 aa17.66■□□□□ 0.42
NEDD4L-228ENST00000590248 SP8Q8IXZ3 490 aa17.66■□□□□ 0.42
NEDD4L-228ENST00000590248 LARGE2Q8N3Y3 721 aa17.66■□□□□ 0.42
NEDD4L-228ENST00000590248 JDP2Q8WYK2 163 aa17.66■□□□□ 0.42
NEDD4L-228ENST00000590248 CHMP4AQ9BY43 222 aa17.66■□□□□ 0.42
NEDD4L-228ENST00000590248 APLP1P51693 650 aa17.65■□□□□ 0.42
NEDD4L-228ENST00000590248 AOC3Q16853 763 aa17.65■□□□□ 0.42
NEDD4L-228ENST00000590248 CCDC191Q8NCU4 936 aa17.65■□□□□ 0.42
NEDD4L-228ENST00000590248 CCDC85AQ96PX6 553 aaPredicted RBP17.65■□□□□ 0.42
NEDD4L-228ENST00000590248 CWC25Q9NXE8 425 aaPredicted RBP17.65■□□□□ 0.42
NEDD4L-228ENST00000590248 PPIP5K2O43314 1243 aa17.64■□□□□ 0.41
NEDD4L-228ENST00000590248 IGKV5-2P06315 115 aa17.64■□□□□ 0.41
NEDD4L-228ENST00000590248 GRIPAP1Q4V328 841 aa17.64■□□□□ 0.41
NEDD4L-228ENST00000590248 DPP8Q6V1X1 898 aaPredicted RBP17.64■□□□□ 0.41
NEDD4L-228ENST00000590248 MPNDQ8N594 471 aa17.64■□□□□ 0.41
NEDD4L-228ENST00000590248 GJA3Q9Y6H8 435 aa17.64■□□□□ 0.41
NEDD4L-228ENST00000590248 CWF19L2Q2TBE0 894 aaKnown RBP17.63■□□□□ 0.41
NEDD4L-228ENST00000590248 TAF1DQ9H5J8 278 aaPredicted RBP17.63■□□□□ 0.41
NEDD4L-228ENST00000590248 SEC31BQ9NQW1 1179 aa17.63■□□□□ 0.41
NEDD4L-228ENST00000590248 MYH3P11055 1940 aa17.62■□□□□ 0.41
NEDD4L-228ENST00000590248 PCCAP05165 728 aaPredicted RBP17.62■□□□□ 0.41
NEDD4L-228ENST00000590248 EIF6P56537 245 aaKnown RBP17.62■□□□□ 0.41
NEDD4L-228ENST00000590248 FLIIQ13045 1269 aa17.62■□□□□ 0.41
NEDD4L-228ENST00000590248 L3MBTL3Q96JM7 780 aaPredicted RBP17.62■□□□□ 0.41
NEDD4L-228ENST00000590248 LRRC37AA6NMS7 1700 aa17.61■□□□□ 0.41
NEDD4L-228ENST00000590248 FKBP5Q13451 457 aaPredicted RBP17.61■□□□□ 0.41
NEDD4L-228ENST00000590248 EAPPQ56P03 285 aaPredicted RBP17.61■□□□□ 0.41
NEDD4L-228ENST00000590248 NIM1KQ8IY84 436 aa17.61■□□□□ 0.41
NEDD4L-228ENST00000590248 GPC2Q8N158 579 aa17.61■□□□□ 0.41
NEDD4L-228ENST00000590248 DNAJC5GQ8N7S2 189 aa17.61■□□□□ 0.41
NEDD4L-228ENST00000590248 RTFDC1Q9BY42 306 aaPredicted RBP17.61■□□□□ 0.41
NEDD4L-228ENST00000590248 NSFL1CQ9UNZ2 370 aaKnown RBP17.61■□□□□ 0.41
NEDD4L-228ENST00000590248 SPEF2Q9C093 1822 aa17.61■□□□□ 0.41
NEDD4L-228ENST00000590248 IQCA1LA6NCM1 817 aa17.6■□□□□ 0.41
NEDD4L-228ENST00000590248 PDE8AO60658 829 aa17.6■□□□□ 0.41
NEDD4L-228ENST00000590248 RPS8P62241 208 aaKnown RBP17.6■□□□□ 0.41
NEDD4L-228ENST00000590248 NEXNQ0ZGT2 675 aa17.6■□□□□ 0.41
NEDD4L-228ENST00000590248 SUPT20HQ8NEM7 779 aa17.6■□□□□ 0.41
NEDD4L-228ENST00000590248 HACL1Q9UJ83 578 aa17.6■□□□□ 0.41
NEDD4L-228ENST00000590248 DUOX1Q9NRD9 1551 aa17.6■□□□□ 0.41
NEDD4L-228ENST00000590248 LTBP1Q14766 1721 aa17.6■□□□□ 0.41
NEDD4L-228ENST00000590248 NEURL1BA8MQ27 555 aa17.59■□□□□ 0.41
NEDD4L-228ENST00000590248 EPHX2P34913 555 aa17.59■□□□□ 0.41
NEDD4L-228ENST00000590248 GPSM2P81274 684 aa17.59■□□□□ 0.41
NEDD4L-228ENST00000590248 CHADLQ6NUI6 762 aa17.59■□□□□ 0.41
NEDD4L-228ENST00000590248 GPR101Q96P66 508 aaPredicted RBP17.59■□□□□ 0.41
NEDD4L-228ENST00000590248 ZNF521Q96K83 1311 aa17.58■□□□□ 0.4
NEDD4L-228ENST00000590248 RIMBP2O15034 1052 aa17.58■□□□□ 0.4
NEDD4L-228ENST00000590248 MYH16Q9H6N6 1097 aa17.58■□□□□ 0.4
NEDD4L-228ENST00000590248 POLLQ9UGP5 575 aa17.58■□□□□ 0.4
NEDD4L-228ENST00000590248 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
NEDD4L-228ENST00000590248 F6X3S4 739 aa17.57■□□□□ 0.4
NEDD4L-228ENST00000590248 C6orf229H3BNL8 230 aa17.57■□□□□ 0.4
NEDD4L-228ENST00000590248 CXCL9Q07325 125 aa17.57■□□□□ 0.4
NEDD4L-228ENST00000590248 KIAA2012Q0VF49 1180 aa17.57■□□□□ 0.4
NEDD4L-228ENST00000590248 CCDC152Q4G0S7 254 aa17.57■□□□□ 0.4
NEDD4L-228ENST00000590248 TMC4Q7Z404 712 aa17.57■□□□□ 0.4
NEDD4L-228ENST00000590248 DNAAF4Q8WXU2 420 aa17.57■□□□□ 0.4
NEDD4L-228ENST00000590248 VPS33BQ9H267 617 aa17.57■□□□□ 0.4
NEDD4L-228ENST00000590248 ZNRF3Q9ULT6 936 aa17.57■□□□□ 0.4
NEDD4L-228ENST00000590248 CDHR2Q9BYE9 1310 aa17.56■□□□□ 0.4
NEDD4L-228ENST00000590248 HSP90B1P14625 803 aaKnown RBP17.56■□□□□ 0.4
NEDD4L-228ENST00000590248 EPS15P42566 896 aa17.56■□□□□ 0.4
NEDD4L-228ENST00000590248 SCNN1DP51172 638 aa17.56■□□□□ 0.4
NEDD4L-228ENST00000590248 UBE3BQ7Z3V4 1068 aa17.56■□□□□ 0.4
NEDD4L-228ENST00000590248 YDJCA8MPS7 323 aa17.55■□□□□ 0.4
NEDD4L-228ENST00000590248 H7C1W4 665 aa17.55■□□□□ 0.4
NEDD4L-228ENST00000590248 RAD17O75943 681 aa17.55■□□□□ 0.4
NEDD4L-228ENST00000590248 GCKRQ14397 625 aa17.55■□□□□ 0.4
NEDD4L-228ENST00000590248 WASHC4Q2M389 1173 aa17.55■□□□□ 0.4
NEDD4L-228ENST00000590248 LDHDQ86WU2 507 aa17.55■□□□□ 0.4
NEDD4L-228ENST00000590248 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
NEDD4L-228ENST00000590248 GREM2Q9H772 168 aa17.55■□□□□ 0.4
NEDD4L-228ENST00000590248 ADAMTSL1Q8N6G6 1762 aa17.55■□□□□ 0.4
NEDD4L-228ENST00000590248 CTSWP56202 376 aa17.54■□□□□ 0.4
NEDD4L-228ENST00000590248 MAP1SQ66K74 1059 aaPredicted RBP17.54■□□□□ 0.4
NEDD4L-228ENST00000590248 TBC1D16Q8TBP0 767 aa17.54■□□□□ 0.4
NEDD4L-228ENST00000590248 DBNDD1Q9H9R9 158 aa17.54■□□□□ 0.4
NEDD4L-228ENST00000590248 LMOD1P29536 600 aaPredicted RBP17.53■□□□□ 0.4
NEDD4L-228ENST00000590248 DOK7Q18PE1 504 aa17.53■□□□□ 0.4
NEDD4L-228ENST00000590248 CIAPIN1Q6FI81 312 aa17.53■□□□□ 0.4
NEDD4L-228ENST00000590248 PNMA8AQ86V59 439 aaPredicted RBP17.53■□□□□ 0.4
NEDD4L-228ENST00000590248 ANKRD18AQ8IVF6 992 aa17.53■□□□□ 0.4
NEDD4L-228ENST00000590248 LINS1Q8NG48 757 aa17.53■□□□□ 0.4
NEDD4L-228ENST00000590248 KCNQ5Q9NR82 932 aa17.53■□□□□ 0.4
NEDD4L-228ENST00000590248 SCN9AQ15858 1988 aa17.52■□□□□ 0.4
NEDD4L-228ENST00000590248 WTIPA6NIX2 430 aaPredicted RBP17.52■□□□□ 0.4
NEDD4L-228ENST00000590248 ITGBL1O95965 494 aaPredicted RBP17.52■□□□□ 0.4
NEDD4L-228ENST00000590248 GMPSP49915 693 aaPredicted RBP17.52■□□□□ 0.4
NEDD4L-228ENST00000590248 CASP7P55210 303 aa17.52■□□□□ 0.4
NEDD4L-228ENST00000590248 KLRG1Q96E93 195 aa17.52■□□□□ 0.4
NEDD4L-228ENST00000590248 CDCA7LQ96GN5 454 aa17.52■□□□□ 0.4
NEDD4L-228ENST00000590248 ANKIB1Q9P2G1 1089 aa17.52■□□□□ 0.4
NEDD4L-228ENST00000590248 POLR2AP24928 1970 aaKnown RBP17.51■□□□□ 0.39
NEDD4L-228ENST00000590248 SHTN1A0MZ66 631 aa17.51■□□□□ 0.39
NEDD4L-228ENST00000590248 UFL1O94874 794 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms