RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 CLEC11AQ9Y240 323 aa23.38■■□□□ 1.33
H3F3B-209ENST00000589949 TRIM28Q13263 835 aaKnown RBP23.37■■□□□ 1.33
H3F3B-209ENST00000589949 TSPYL6Q8N831 410 aa23.37■■□□□ 1.33
H3F3B-209ENST00000589949 DUOX1Q9NRD9 1551 aa23.36■■□□□ 1.33
H3F3B-209ENST00000589949 DPP8Q6V1X1 898 aaPredicted RBP23.36■■□□□ 1.33
H3F3B-209ENST00000589949 PNMA8AQ86V59 439 aaPredicted RBP23.36■■□□□ 1.33
H3F3B-209ENST00000589949 MPNDQ8N594 471 aa23.36■■□□□ 1.33
H3F3B-209ENST00000589949 CELF1Q92879 486 aaKnown RBP23.36■■□□□ 1.33
H3F3B-209ENST00000589949 CXCL9Q07325 125 aa23.35■■□□□ 1.33
H3F3B-209ENST00000589949 SF3B3Q15393 1217 aaKnown RBP23.35■■□□□ 1.33
H3F3B-209ENST00000589949 CNTROBQ8N137 903 aa23.35■■□□□ 1.33
H3F3B-209ENST00000589949 HSPA1AP0DMV8 641 aaKnown RBP23.34■■□□□ 1.33
H3F3B-209ENST00000589949 HSPA1BP0DMV9 641 aaKnown RBP23.34■■□□□ 1.33
H3F3B-209ENST00000589949 CALD1Q05682 793 aaKnown RBP23.34■■□□□ 1.33
H3F3B-209ENST00000589949 FMR1Q06787 632 aaKnown RBP eCLIP23.34■■□□□ 1.33
H3F3B-209ENST00000589949 VPS33BQ9H267 617 aa23.34■■□□□ 1.33
H3F3B-209ENST00000589949 ZNRF3Q9ULT6 936 aa23.34■■□□□ 1.33
H3F3B-209ENST00000589949 LRRC37AA6NMS7 1700 aa23.33■■□□□ 1.33
H3F3B-209ENST00000589949 KIAA2012Q0VF49 1180 aa23.33■■□□□ 1.33
H3F3B-209ENST00000589949 RIC3Q7Z5B4 369 aa23.33■■□□□ 1.33
H3F3B-209ENST00000589949 TSR2Q969E8 191 aaKnown RBP23.33■■□□□ 1.33
H3F3B-209ENST00000589949 TMX4Q9H1E5 349 aaPredicted RBP23.33■■□□□ 1.33
H3F3B-209ENST00000589949 CNTNAP1P78357 1384 aa23.32■■□□□ 1.32
H3F3B-209ENST00000589949 IRS4O14654 1257 aaPredicted RBP23.32■■□□□ 1.32
H3F3B-209ENST00000589949 SUPT20HQ8NEM7 779 aa23.32■■□□□ 1.32
H3F3B-209ENST00000589949 TMEM88BA6NKF7 163 aa23.31■■□□□ 1.32
H3F3B-209ENST00000589949 YDJCA8MPS7 323 aa23.31■■□□□ 1.32
H3F3B-209ENST00000589949 LMOD1P29536 600 aaPredicted RBP23.31■■□□□ 1.32
H3F3B-209ENST00000589949 GOLGA2Q08379 1002 aa23.31■■□□□ 1.32
H3F3B-209ENST00000589949 JARID2Q92833 1246 aaPredicted RBP23.31■■□□□ 1.32
H3F3B-209ENST00000589949 MYD88Q99836 296 aa23.31■■□□□ 1.32
H3F3B-209ENST00000589949 RAD17O75943 681 aa23.3■■□□□ 1.32
H3F3B-209ENST00000589949 GPRC5DQ9NZD1 345 aa23.3■■□□□ 1.32
H3F3B-209ENST00000589949 GMPSP49915 693 aaPredicted RBP23.29■■□□□ 1.32
H3F3B-209ENST00000589949 WWC1Q8IX03 1113 aa23.29■■□□□ 1.32
H3F3B-209ENST00000589949 ZBTB38Q8NAP3 1195 aaPredicted RBP23.29■■□□□ 1.32
H3F3B-209ENST00000589949 VEGFBP49765 207 aa23.28■■□□□ 1.32
H3F3B-209ENST00000589949 GPSM2P81274 684 aa23.28■■□□□ 1.32
H3F3B-209ENST00000589949 TMC4Q7Z404 712 aa23.28■■□□□ 1.32
H3F3B-209ENST00000589949 SEC31BQ9NQW1 1179 aa23.28■■□□□ 1.32
H3F3B-209ENST00000589949 POLLQ9UGP5 575 aa23.28■■□□□ 1.32
H3F3B-209ENST00000589949 SHTN1A0MZ66 631 aa23.27■■□□□ 1.32
H3F3B-209ENST00000589949 CCDC27Q2M243 656 aa23.27■■□□□ 1.32
H3F3B-209ENST00000589949 CCDC30Q5VVM6 783 aa23.27■■□□□ 1.32
H3F3B-209ENST00000589949 CIAPIN1Q6FI81 312 aa23.27■■□□□ 1.32
H3F3B-209ENST00000589949 USP50Q70EL3 339 aaPredicted RBP23.27■■□□□ 1.32
H3F3B-209ENST00000589949 NSFL1CQ9UNZ2 370 aaKnown RBP23.27■■□□□ 1.32
H3F3B-209ENST00000589949 TRAF5O00463 557 aa23.26■■□□□ 1.31
H3F3B-209ENST00000589949 GPR101Q96P66 508 aaPredicted RBP23.26■■□□□ 1.31
H3F3B-209ENST00000589949 METTL22Q9BUU2 404 aaPredicted RBP23.26■■□□□ 1.31
H3F3B-209ENST00000589949 PCCAP05165 728 aaPredicted RBP23.25■■□□□ 1.31
H3F3B-209ENST00000589949 RPS8P62241 208 aaKnown RBP23.25■■□□□ 1.31
H3F3B-209ENST00000589949 CCDC191Q8NCU4 936 aa23.25■■□□□ 1.31
H3F3B-209ENST00000589949 ADARB2Q9NS39 739 aaKnown RBP23.25■■□□□ 1.31
H3F3B-209ENST00000589949 MAP3K2Q9Y2U5 619 aa23.25■■□□□ 1.31
H3F3B-209ENST00000589949 IGKV5-2P06315 115 aa23.24■■□□□ 1.31
H3F3B-209ENST00000589949 HIRAP54198 1017 aaPredicted RBP23.24■■□□□ 1.31
H3F3B-209ENST00000589949 G2E3Q7L622 706 aa23.24■■□□□ 1.31
H3F3B-209ENST00000589949 KCNQ5Q9NR82 932 aa23.24■■□□□ 1.31
H3F3B-209ENST00000589949 RASSF10A6NK89 507 aa23.23■■□□□ 1.31
H3F3B-209ENST00000589949 RIMBP2O15034 1052 aa23.23■■□□□ 1.31
H3F3B-209ENST00000589949 WASHC4Q2M389 1173 aa23.23■■□□□ 1.31
H3F3B-209ENST00000589949 CST9Q5W186 159 aa23.23■■□□□ 1.31
H3F3B-209ENST00000589949 CCDC85AQ96PX6 553 aaPredicted RBP23.23■■□□□ 1.31
H3F3B-209ENST00000589949 DBNDD1Q9H9R9 158 aa23.23■■□□□ 1.31
H3F3B-209ENST00000589949 MRS2Q9HD23 443 aa23.23■■□□□ 1.31
H3F3B-209ENST00000589949 CWC25Q9NXE8 425 aaPredicted RBP23.23■■□□□ 1.31
H3F3B-209ENST00000589949 PI4KAP2A4QPH2 592 aa23.22■■□□□ 1.31
H3F3B-209ENST00000589949 PI4KAP1Q8N8J0 262 aa23.22■■□□□ 1.31
H3F3B-209ENST00000589949 TBC1D16Q8TBP0 767 aa23.22■■□□□ 1.31
H3F3B-209ENST00000589949 TRPM4Q8TD43 1214 aa23.22■■□□□ 1.31
H3F3B-209ENST00000589949 ZBTB12Q9Y330 459 aaPredicted RBP23.22■■□□□ 1.31
H3F3B-209ENST00000589949 C6orf229H3BNL8 230 aa23.21■■□□□ 1.31
H3F3B-209ENST00000589949 TNIP1Q15025 636 aa23.21■■□□□ 1.31
H3F3B-209ENST00000589949 KSR2Q6VAB6 950 aa23.21■■□□□ 1.31
H3F3B-209ENST00000589949 ZNF316A6NFI3 1004 aaPredicted RBP23.2■■□□□ 1.3
H3F3B-209ENST00000589949 PSMD14O00487 310 aa23.2■■□□□ 1.3
H3F3B-209ENST00000589949 FOXN1O15353 648 aa23.2■■□□□ 1.3
H3F3B-209ENST00000589949 PDE8AO60658 829 aa23.2■■□□□ 1.3
H3F3B-209ENST00000589949 DDX58O95786 925 aaKnown RBP23.2■■□□□ 1.3
H3F3B-209ENST00000589949 DOK7Q18PE1 504 aa23.2■■□□□ 1.3
H3F3B-209ENST00000589949 TWISTNBQ3B726 338 aaPredicted RBP23.2■■□□□ 1.3
H3F3B-209ENST00000589949 BCL2L13Q9BXK5 485 aa23.2■■□□□ 1.3
H3F3B-209ENST00000589949 PGAP2Q9UHJ9 254 aa23.2■■□□□ 1.3
H3F3B-209ENST00000589949 CNOT7Q9UIV1 285 aaKnown RBP23.2■■□□□ 1.3
H3F3B-209ENST00000589949 RTL9Q8NET4 1388 aa23.19■■□□□ 1.3
H3F3B-209ENST00000589949 CWF19L2Q2TBE0 894 aaKnown RBP23.19■■□□□ 1.3
H3F3B-209ENST00000589949 DEFB115Q30KQ5 88 aa23.19■■□□□ 1.3
H3F3B-209ENST00000589949 IL16Q14005 1332 aa23.18■■□□□ 1.3
H3F3B-209ENST00000589949 CDHR2Q9BYE9 1310 aa23.18■■□□□ 1.3
H3F3B-209ENST00000589949 ZEB1P37275 1124 aaPredicted RBP23.18■■□□□ 1.3
H3F3B-209ENST00000589949 GLIS2Q9BZE0 524 aaPredicted RBP23.18■■□□□ 1.3
H3F3B-209ENST00000589949 PODXL2Q9NZ53 605 aa23.18■■□□□ 1.3
H3F3B-209ENST00000589949 ABT1Q9ULW3 272 aaKnown RBP23.18■■□□□ 1.3
H3F3B-209ENST00000589949 SALL2Q9Y467 1007 aaPredicted RBP23.18■■□□□ 1.3
H3F3B-209ENST00000589949 FANCIQ9NVI1 1328 aa23.17■■□□□ 1.3
H3F3B-209ENST00000589949 WTIPA6NIX2 430 aaPredicted RBP23.17■■□□□ 1.3
H3F3B-209ENST00000589949 ECE2O60344 883 aa23.17■■□□□ 1.3
H3F3B-209ENST00000589949 EGFRP00533 1210 aa23.17■■□□□ 1.3
H3F3B-209ENST00000589949 SLC4A2P04920 1241 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms