RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 GRAPLQ8TC17 118 aaPredicted RBP21.97■■□□□ 1.11
TMED1-203ENST00000588259 CALD1Q05682 793 aaKnown RBP21.96■■□□□ 1.11
TMED1-203ENST00000588259 SP8Q8IXZ3 490 aa21.96■■□□□ 1.11
TMED1-203ENST00000588259 FAM89AQ96GI7 184 aa21.96■■□□□ 1.11
TMED1-203ENST00000588259 ELL2O00472 640 aaPredicted RBP21.95■■□□□ 1.1
TMED1-203ENST00000588259 CAPN15O75808 1086 aa21.95■■□□□ 1.1
TMED1-203ENST00000588259 ZNRF3Q9ULT6 936 aa21.95■■□□□ 1.1
TMED1-203ENST00000588259 GNAI1P63096 354 aa21.94■■□□□ 1.1
TMED1-203ENST00000588259 GOLGA2Q08379 1002 aa21.94■■□□□ 1.1
TMED1-203ENST00000588259 RIC3Q7Z5B4 369 aa21.94■■□□□ 1.1
TMED1-203ENST00000588259 VPS33BQ9H267 617 aa21.94■■□□□ 1.1
TMED1-203ENST00000588259 IFT57Q9NWB7 429 aa21.94■■□□□ 1.1
TMED1-203ENST00000588259 ABT1Q9ULW3 272 aaKnown RBP21.94■■□□□ 1.1
TMED1-203ENST00000588259 ISCA1Q9BUE6 129 aa21.93■■□□□ 1.1
TMED1-203ENST00000588259 RTFDC1Q9BY42 306 aaPredicted RBP21.93■■□□□ 1.1
TMED1-203ENST00000588259 VEGFBP49765 207 aa21.92■■□□□ 1.1
TMED1-203ENST00000588259 CXCL9Q07325 125 aa21.92■■□□□ 1.1
TMED1-203ENST00000588259 TMC4Q7Z404 712 aa21.92■■□□□ 1.1
TMED1-203ENST00000588259 AIDAQ96BJ3 306 aa21.92■■□□□ 1.1
TMED1-203ENST00000588259 LRRC37AA6NMS7 1700 aa21.92■■□□□ 1.1
TMED1-203ENST00000588259 RAD17O75943 681 aa21.91■■□□□ 1.1
TMED1-203ENST00000588259 GMPSP49915 693 aaPredicted RBP21.91■■□□□ 1.1
TMED1-203ENST00000588259 KIAA2012Q0VF49 1180 aa21.91■■□□□ 1.1
TMED1-203ENST00000588259 CIAPIN1Q6FI81 312 aa21.91■■□□□ 1.1
TMED1-203ENST00000588259 USP50Q70EL3 339 aaPredicted RBP21.91■■□□□ 1.1
TMED1-203ENST00000588259 BCL2L13Q9BXK5 485 aa21.91■■□□□ 1.1
TMED1-203ENST00000588259 GPRC5DQ9NZD1 345 aa21.91■■□□□ 1.1
TMED1-203ENST00000588259 IRS4O14654 1257 aaPredicted RBP21.9■■□□□ 1.1
TMED1-203ENST00000588259 ZNF853P0CG23 659 aa21.9■■□□□ 1.1
TMED1-203ENST00000588259 PAXIP1Q6ZW49 1069 aaPredicted RBP21.9■■□□□ 1.1
TMED1-203ENST00000588259 ADARB2Q9NS39 739 aaKnown RBP21.9■■□□□ 1.1
TMED1-203ENST00000588259 TRPM7Q96QT4 1865 aa21.9■■□□□ 1.1
TMED1-203ENST00000588259 TNIP1Q15025 636 aa21.89■■□□□ 1.09
TMED1-203ENST00000588259 PHAXQ9H814 394 aaKnown RBP21.89■■□□□ 1.09
TMED1-203ENST00000588259 NSFL1CQ9UNZ2 370 aaKnown RBP21.89■■□□□ 1.09
TMED1-203ENST00000588259 DUOX1Q9NRD9 1551 aa21.89■■□□□ 1.09
TMED1-203ENST00000588259 C6orf229H3BNL8 230 aa21.88■■□□□ 1.09
TMED1-203ENST00000588259 TRAF5O00463 557 aa21.88■■□□□ 1.09
TMED1-203ENST00000588259 DEFB115Q30KQ5 88 aa21.88■■□□□ 1.09
TMED1-203ENST00000588259 CELF1Q92879 486 aaKnown RBP21.88■■□□□ 1.09
TMED1-203ENST00000588259 MYD88Q99836 296 aa21.88■■□□□ 1.09
TMED1-203ENST00000588259 FOXN1O15353 648 aa21.87■■□□□ 1.09
TMED1-203ENST00000588259 FMR1Q06787 632 aaKnown RBP eCLIP21.87■■□□□ 1.09
TMED1-203ENST00000588259 GRM1Q13255 1194 aa21.87■■□□□ 1.09
TMED1-203ENST00000588259 SF3B3Q15393 1217 aaKnown RBP21.87■■□□□ 1.09
TMED1-203ENST00000588259 RASSF10A6NK89 507 aa21.86■■□□□ 1.09
TMED1-203ENST00000588259 RIMBP2O15034 1052 aa21.86■■□□□ 1.09
TMED1-203ENST00000588259 C8orf58Q8NAV2 365 aa21.86■■□□□ 1.09
TMED1-203ENST00000588259 HSP90B1P14625 803 aaKnown RBP21.85■■□□□ 1.09
TMED1-203ENST00000588259 TRIM28Q13263 835 aaKnown RBP21.85■■□□□ 1.09
TMED1-203ENST00000588259 WASHC4Q2M389 1173 aa21.85■■□□□ 1.09
TMED1-203ENST00000588259 CCDC30Q5VVM6 783 aa21.85■■□□□ 1.09
TMED1-203ENST00000588259 COL4A1P02462 1669 aa21.85■■□□□ 1.09
TMED1-203ENST00000588259 CDHR2Q9BYE9 1310 aa21.84■■□□□ 1.09
TMED1-203ENST00000588259 DDX58O95786 925 aaKnown RBP21.84■■□□□ 1.09
TMED1-203ENST00000588259 GPSM2P81274 684 aa21.84■■□□□ 1.09
TMED1-203ENST00000588259 ZBTB38Q8NAP3 1195 aaPredicted RBP21.84■■□□□ 1.09
TMED1-203ENST00000588259 DBNDD1Q9H9R9 158 aa21.84■■□□□ 1.09
TMED1-203ENST00000588259 WDR33Q9C0J8 1336 aaKnown RBP21.83■■□□□ 1.09
TMED1-203ENST00000588259 YDJCA8MPS7 323 aa21.83■■□□□ 1.09
TMED1-203ENST00000588259 JARID2Q92833 1246 aaPredicted RBP21.83■■□□□ 1.09
TMED1-203ENST00000588259 CHMP4AQ9BY43 222 aa21.83■■□□□ 1.09
TMED1-203ENST00000588259 CWC25Q9NXE8 425 aaPredicted RBP21.83■■□□□ 1.09
TMED1-203ENST00000588259 CTCFP49711 727 aaPredicted RBP21.82■■□□□ 1.08
TMED1-203ENST00000588259 RPS8P62241 208 aaKnown RBP21.82■■□□□ 1.08
TMED1-203ENST00000588259 TSR2Q969E8 191 aaKnown RBP21.82■■□□□ 1.08
TMED1-203ENST00000588259 GPR101Q96P66 508 aaPredicted RBP21.82■■□□□ 1.08
TMED1-203ENST00000588259 CCDC85AQ96PX6 553 aaPredicted RBP21.82■■□□□ 1.08
TMED1-203ENST00000588259 EYA3Q99504 573 aa21.82■■□□□ 1.08
TMED1-203ENST00000588259 G3V3G9 751 aa21.81■■□□□ 1.08
TMED1-203ENST00000588259 H7C1D1 291 aa21.81■■□□□ 1.08
TMED1-203ENST00000588259 DOK7Q18PE1 504 aa21.81■■□□□ 1.08
TMED1-203ENST00000588259 CCDC152Q4G0S7 254 aa21.81■■□□□ 1.08
TMED1-203ENST00000588259 CCDC184Q52MB2 194 aa21.81■■□□□ 1.08
TMED1-203ENST00000588259 DCAF8Q5TAQ9 597 aa21.81■■□□□ 1.08
TMED1-203ENST00000588259 MICALL2Q8IY33 904 aa21.81■■□□□ 1.08
TMED1-203ENST00000588259 TSPYL6Q8N831 410 aa21.81■■□□□ 1.08
TMED1-203ENST00000588259 CCDC191Q8NCU4 936 aa21.81■■□□□ 1.08
TMED1-203ENST00000588259 TRPM4Q8TD43 1214 aa21.81■■□□□ 1.08
TMED1-203ENST00000588259 GLIS2Q9BZE0 524 aaPredicted RBP21.81■■□□□ 1.08
TMED1-203ENST00000588259 ZNF408Q9H9D4 720 aa21.81■■□□□ 1.08
TMED1-203ENST00000588259 SEC31BQ9NQW1 1179 aa21.81■■□□□ 1.08
TMED1-203ENST00000588259 POLLQ9UGP5 575 aa21.81■■□□□ 1.08
TMED1-203ENST00000588259 CNOT7Q9UIV1 285 aaKnown RBP21.81■■□□□ 1.08
TMED1-203ENST00000588259 ZBTB12Q9Y330 459 aaPredicted RBP21.81■■□□□ 1.08
TMED1-203ENST00000588259 SHTN1A0MZ66 631 aa21.8■■□□□ 1.08
TMED1-203ENST00000588259 PSMD14O00487 310 aa21.8■■□□□ 1.08
TMED1-203ENST00000588259 CAPNS2Q96L46 248 aa21.8■■□□□ 1.08
TMED1-203ENST00000588259 STK31Q9BXU1 1019 aa21.8■■□□□ 1.08
TMED1-203ENST00000588259 ANKIB1Q9P2G1 1089 aa21.8■■□□□ 1.08
TMED1-203ENST00000588259 MAP3K2Q9Y2U5 619 aa21.8■■□□□ 1.08
TMED1-203ENST00000588259 ECE2O60344 883 aa21.79■■□□□ 1.08
TMED1-203ENST00000588259 UFL1O94874 794 aa21.79■■□□□ 1.08
TMED1-203ENST00000588259 CELF2O95319 508 aaKnown RBP21.79■■□□□ 1.08
TMED1-203ENST00000588259 PCCAP05165 728 aaPredicted RBP21.79■■□□□ 1.08
TMED1-203ENST00000588259 ECE1P42892 770 aa21.79■■□□□ 1.08
TMED1-203ENST00000588259 CST9Q5W186 159 aa21.79■■□□□ 1.08
TMED1-203ENST00000588259 CYP4F22Q6NT55 531 aa21.79■■□□□ 1.08
TMED1-203ENST00000588259 METTL22Q9BUU2 404 aaPredicted RBP21.79■■□□□ 1.08
TMED1-203ENST00000588259 WBP1LQ9NX94 342 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms