RNA–Protein interactions for RNA: ENST00000585843.1

DNMT1-204, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 911 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-204ENST00000585843 OLFM4Q6UX06 510 aa17.71■□□□□ 0.43
DNMT1-204ENST00000585843 TAOK3Q9H2K8 898 aa17.71■□□□□ 0.43
DNMT1-204ENST00000585843 RNF181Q9P0P0 153 aa17.71■□□□□ 0.43
DNMT1-204ENST00000585843 LAMB2P55268 1798 aa17.71■□□□□ 0.43
DNMT1-204ENST00000585843 LTBP3Q9NS15 1303 aa17.71■□□□□ 0.42
DNMT1-204ENST00000585843 GRIPAP1Q4V328 841 aa17.7■□□□□ 0.42
DNMT1-204ENST00000585843 C9orf78Q9NZ63 289 aaPredicted RBP17.7■□□□□ 0.42
DNMT1-204ENST00000585843 ATP6V0A2Q9Y487 856 aa17.7■□□□□ 0.42
DNMT1-204ENST00000585843 CASP7P55210 303 aa17.69■□□□□ 0.42
DNMT1-204ENST00000585843 CTSWP56202 376 aa17.69■□□□□ 0.42
DNMT1-204ENST00000585843 FKBP4Q02790 459 aaKnown RBP eCLIP17.69■□□□□ 0.42
DNMT1-204ENST00000585843 TMC4Q7Z404 712 aa17.69■□□□□ 0.42
DNMT1-204ENST00000585843 API5Q9BZZ5 524 aaKnown RBP17.69■□□□□ 0.42
DNMT1-204ENST00000585843 KIF16BQ96L93 1317 aa17.69■□□□□ 0.42
DNMT1-204ENST00000585843 GRM8O00222 908 aa17.68■□□□□ 0.42
DNMT1-204ENST00000585843 SP8Q8IXZ3 490 aa17.68■□□□□ 0.42
DNMT1-204ENST00000585843 ZNF784Q8NCA9 323 aaPredicted RBP17.68■□□□□ 0.42
DNMT1-204ENST00000585843 CCDC85AQ96PX6 553 aaPredicted RBP17.68■□□□□ 0.42
DNMT1-204ENST00000585843 PLA2G12BQ9BX93 195 aa17.68■□□□□ 0.42
DNMT1-204ENST00000585843 IPO8O15397 1037 aaKnown RBP17.67■□□□□ 0.42
DNMT1-204ENST00000585843 PRELPP51888 382 aa17.67■□□□□ 0.42
DNMT1-204ENST00000585843 RPS8P62241 208 aaKnown RBP17.67■□□□□ 0.42
DNMT1-204ENST00000585843 TTLL11Q8NHH1 800 aa17.67■□□□□ 0.42
DNMT1-204ENST00000585843 ARHGAP45Q92619 1136 aa17.67■□□□□ 0.42
DNMT1-204ENST00000585843 CELF1Q92879 486 aaKnown RBP17.67■□□□□ 0.42
DNMT1-204ENST00000585843 BCAR3O75815 825 aa17.66■□□□□ 0.42
DNMT1-204ENST00000585843 PSMD1Q99460 953 aa17.66■□□□□ 0.42
DNMT1-204ENST00000585843 SEC31BQ9NQW1 1179 aa17.66■□□□□ 0.42
DNMT1-204ENST00000585843 FER1L6Q2WGJ9 1857 aa17.66■□□□□ 0.42
DNMT1-204ENST00000585843 CCT4P50991 539 aaKnown RBP17.65■□□□□ 0.42
DNMT1-204ENST00000585843 GREM2Q9H772 168 aa17.65■□□□□ 0.42
DNMT1-204ENST00000585843 ZNF277Q9NRM2 450 aaPredicted RBP17.65■□□□□ 0.42
DNMT1-204ENST00000585843 RTL9Q8NET4 1388 aa17.65■□□□□ 0.42
DNMT1-204ENST00000585843 CSF1RP07333 972 aa17.64■□□□□ 0.41
DNMT1-204ENST00000585843 DPP8Q6V1X1 898 aaPredicted RBP17.64■□□□□ 0.41
DNMT1-204ENST00000585843 SLC51AQ86UW1 340 aa17.64■□□□□ 0.41
DNMT1-204ENST00000585843 ANKRD18AQ8IVF6 992 aa17.64■□□□□ 0.41
DNMT1-204ENST00000585843 MPNDQ8N594 471 aa17.64■□□□□ 0.41
DNMT1-204ENST00000585843 FRAT1Q92837 279 aaPredicted RBP17.64■□□□□ 0.41
DNMT1-204ENST00000585843 CDC5LQ99459 802 aaKnown RBP17.64■□□□□ 0.41
DNMT1-204ENST00000585843 SBF1O95248 1867 aa17.64■□□□□ 0.41
DNMT1-204ENST00000585843 ZC3H4Q9UPT8 1303 aaKnown RBP17.64■□□□□ 0.41
DNMT1-204ENST00000585843 SNED1Q8TER0 1413 aa17.64■□□□□ 0.41
DNMT1-204ENST00000585843 FOXO4P98177 505 aa17.63■□□□□ 0.41
DNMT1-204ENST00000585843 SUPT20HQ8NEM7 779 aa17.63■□□□□ 0.41
DNMT1-204ENST00000585843 UTYO14607 1347 aa17.63■□□□□ 0.41
DNMT1-204ENST00000585843 NBPF7P0C2Y1 421 aaPredicted RBP17.62■□□□□ 0.41
DNMT1-204ENST00000585843 IARSP41252 1262 aaKnown RBP17.62■□□□□ 0.41
DNMT1-204ENST00000585843 ZNF526Q8TF50 670 aaPredicted RBP17.62■□□□□ 0.41
DNMT1-204ENST00000585843 TAF1P21675 1872 aa17.61■□□□□ 0.41
DNMT1-204ENST00000585843 ITGA6P23229 1130 aa17.61■□□□□ 0.41
DNMT1-204ENST00000585843 FAM161AQ3B820 660 aa17.61■□□□□ 0.41
DNMT1-204ENST00000585843 LMBR1LQ6UX01 489 aa17.61■□□□□ 0.41
DNMT1-204ENST00000585843 ATF7IPQ6VMQ6 1270 aa17.61■□□□□ 0.41
DNMT1-204ENST00000585843 RTFDC1Q9BY42 306 aaPredicted RBP17.61■□□□□ 0.41
DNMT1-204ENST00000585843 USP44Q9H0E7 712 aa17.61■□□□□ 0.41
DNMT1-204ENST00000585843 GPBP1L1Q9HC44 474 aaPredicted RBP17.61■□□□□ 0.41
DNMT1-204ENST00000585843 CHMP3Q9Y3E7 222 aa17.61■□□□□ 0.41
DNMT1-204ENST00000585843 EPHA10Q5JZY3 1008 aa17.6■□□□□ 0.41
DNMT1-204ENST00000585843 ZKSCAN2Q63HK3 967 aa17.6■□□□□ 0.41
DNMT1-204ENST00000585843 SUCLG2Q96I99 432 aa17.6■□□□□ 0.41
DNMT1-204ENST00000585843 VPS33BQ9H267 617 aa17.6■□□□□ 0.41
DNMT1-204ENST00000585843 NSFL1CQ9UNZ2 370 aaKnown RBP17.6■□□□□ 0.41
DNMT1-204ENST00000585843 MYH3P11055 1940 aa17.59■□□□□ 0.41
DNMT1-204ENST00000585843 KDM2BQ8NHM5 1336 aa17.59■□□□□ 0.41
DNMT1-204ENST00000585843 ANKRD18BA2A2Z9 1011 aa17.59■□□□□ 0.41
DNMT1-204ENST00000585843 TRIM27P14373 513 aa17.59■□□□□ 0.41
DNMT1-204ENST00000585843 IGHMBP2P38935 993 aaKnown RBP17.59■□□□□ 0.41
DNMT1-204ENST00000585843 GPSM2P81274 684 aa17.59■□□□□ 0.41
DNMT1-204ENST00000585843 IFIT5Q13325 482 aaKnown RBP17.59■□□□□ 0.41
DNMT1-204ENST00000585843 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
DNMT1-204ENST00000585843 LARGE2Q8N3Y3 721 aa17.59■□□□□ 0.41
DNMT1-204ENST00000585843 JDP2Q8WYK2 163 aa17.59■□□□□ 0.41
DNMT1-204ENST00000585843 BSDC1Q9NW68 430 aaPredicted RBP17.59■□□□□ 0.41
DNMT1-204ENST00000585843 CCDC88AQ3V6T2 1871 aa17.58■□□□□ 0.41
DNMT1-204ENST00000585843 COL4A1P02462 1669 aa17.58■□□□□ 0.41
DNMT1-204ENST00000585843 PPIP5K2O43314 1243 aa17.58■□□□□ 0.4
DNMT1-204ENST00000585843 CCDC57Q2TAC2 916 aa17.58■□□□□ 0.4
DNMT1-204ENST00000585843 DPY19L2Q6NUT2 758 aa17.58■□□□□ 0.4
DNMT1-204ENST00000585843 YTHDC1Q96MU7 727 aaKnown RBP17.58■□□□□ 0.4
DNMT1-204ENST00000585843 ANKIB1Q9P2G1 1089 aa17.58■□□□□ 0.4
DNMT1-204ENST00000585843 GLTPD2A6NH11 291 aa17.57■□□□□ 0.4
DNMT1-204ENST00000585843 C6orf229H3BNL8 230 aa17.57■□□□□ 0.4
DNMT1-204ENST00000585843 CLUAP1Q96AJ1 413 aa17.57■□□□□ 0.4
DNMT1-204ENST00000585843 KAZALD1Q96I82 304 aa17.57■□□□□ 0.4
DNMT1-204ENST00000585843 MPHOSPH8Q99549 860 aa17.57■□□□□ 0.4
DNMT1-204ENST00000585843 BICC1Q9H694 974 aaKnown RBP17.57■□□□□ 0.4
DNMT1-204ENST00000585843 PODXL2Q9NZ53 605 aa17.57■□□□□ 0.4
DNMT1-204ENST00000585843 HDAC5Q9UQL6 1122 aa17.57■□□□□ 0.4
DNMT1-204ENST00000585843 LRRC37AA6NMS7 1700 aa17.56■□□□□ 0.4
DNMT1-204ENST00000585843 UBTFL1P0CB47 393 aaPredicted RBP17.56■□□□□ 0.4
DNMT1-204ENST00000585843 AOC3Q16853 763 aa17.56■□□□□ 0.4
DNMT1-204ENST00000585843 TAF7LQ5H9L4 462 aa17.56■□□□□ 0.4
DNMT1-204ENST00000585843 MINPP1Q9UNW1 487 aa17.56■□□□□ 0.4
DNMT1-204ENST00000585843 DICER1Q9UPY3 1922 aaKnown RBP17.56■□□□□ 0.4
DNMT1-204ENST00000585843 TIAM2Q8IVF5 1701 aa17.55■□□□□ 0.4
DNMT1-204ENST00000585843 XDHP47989 1333 aa17.55■□□□□ 0.4
DNMT1-204ENST00000585843 KIAA2012Q0VF49 1180 aa17.55■□□□□ 0.4
DNMT1-204ENST00000585843 WASHC4Q2M389 1173 aa17.55■□□□□ 0.4
DNMT1-204ENST00000585843 RABL6Q3YEC7 729 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms