RNA–Protein interactions for RNA: ENST00000585466.1

CLIP3-202, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 2

Gene CLIP3, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-202ENST00000585466 DDNO94850 711 aaPredicted RBP19.48■□□□□ 0.71
CLIP3-202ENST00000585466 HSPA6P17066 643 aa19.48■□□□□ 0.71
CLIP3-202ENST00000585466 GRIPAP1Q4V328 841 aa19.48■□□□□ 0.71
CLIP3-202ENST00000585466 DDX46Q7L014 1031 aaKnown RBP19.48■□□□□ 0.71
CLIP3-202ENST00000585466 SP8Q8IXZ3 490 aa19.48■□□□□ 0.71
CLIP3-202ENST00000585466 CELF1Q92879 486 aaKnown RBP19.48■□□□□ 0.71
CLIP3-202ENST00000585466 RTFDC1Q9BY42 306 aaPredicted RBP19.48■□□□□ 0.71
CLIP3-202ENST00000585466 MYH16Q9H6N6 1097 aa19.48■□□□□ 0.71
CLIP3-202ENST00000585466 CWC25Q9NXE8 425 aaPredicted RBP19.48■□□□□ 0.71
CLIP3-202ENST00000585466 MYH3P11055 1940 aa19.48■□□□□ 0.71
CLIP3-202ENST00000585466 SCN4AP35499 1836 aa19.47■□□□□ 0.71
CLIP3-202ENST00000585466 VEGFAP15692 232 aaPredicted RBP19.47■□□□□ 0.71
CLIP3-202ENST00000585466 JARID2Q92833 1246 aaPredicted RBP19.47■□□□□ 0.71
CLIP3-202ENST00000585466 NEURL1BA8MQ27 555 aa19.46■□□□□ 0.71
CLIP3-202ENST00000585466 CWF19L2Q2TBE0 894 aaKnown RBP19.46■□□□□ 0.71
CLIP3-202ENST00000585466 DPY19L2Q6NUT2 758 aa19.46■□□□□ 0.71
CLIP3-202ENST00000585466 L3MBTL3Q96JM7 780 aaPredicted RBP19.46■□□□□ 0.71
CLIP3-202ENST00000585466 CDHR2Q9BYE9 1310 aa19.46■□□□□ 0.71
CLIP3-202ENST00000585466 ADAMTSL1Q8N6G6 1762 aa19.44■□□□□ 0.7
CLIP3-202ENST00000585466 SEC31BQ9NQW1 1179 aa19.44■□□□□ 0.7
CLIP3-202ENST00000585466 PDE8AO60658 829 aa19.43■□□□□ 0.7
CLIP3-202ENST00000585466 CASP7P55210 303 aa19.43■□□□□ 0.7
CLIP3-202ENST00000585466 H7C1W4 665 aa19.42■□□□□ 0.7
CLIP3-202ENST00000585466 FSTL1Q12841 308 aa19.42■□□□□ 0.7
CLIP3-202ENST00000585466 FKBP5Q13451 457 aaPredicted RBP19.42■□□□□ 0.7
CLIP3-202ENST00000585466 AOC3Q16853 763 aa19.42■□□□□ 0.7
CLIP3-202ENST00000585466 TMC4Q7Z404 712 aa19.42■□□□□ 0.7
CLIP3-202ENST00000585466 DNAAF4Q8WXU2 420 aa19.42■□□□□ 0.7
CLIP3-202ENST00000585466 POTEIP0CG38 1075 aa19.41■□□□□ 0.7
CLIP3-202ENST00000585466 POTEJP0CG39 1038 aa19.41■□□□□ 0.7
CLIP3-202ENST00000585466 SLFN5Q08AF3 891 aa19.41■□□□□ 0.7
CLIP3-202ENST00000585466 GCKRQ14397 625 aa19.41■□□□□ 0.7
CLIP3-202ENST00000585466 C16orf71Q8IYS4 520 aaPredicted RBP19.41■□□□□ 0.7
CLIP3-202ENST00000585466 MPNDQ8N594 471 aa19.41■□□□□ 0.7
CLIP3-202ENST00000585466 VPS33BQ9H267 617 aa19.41■□□□□ 0.7
CLIP3-202ENST00000585466 SPEF2Q9C093 1822 aa19.4■□□□□ 0.7
CLIP3-202ENST00000585466 F6X3S4 739 aa19.4■□□□□ 0.7
CLIP3-202ENST00000585466 NEXNQ0ZGT2 675 aa19.4■□□□□ 0.7
CLIP3-202ENST00000585466 DPP8Q6V1X1 898 aaPredicted RBP19.4■□□□□ 0.7
CLIP3-202ENST00000585466 TRMT2AQ8IZ69 625 aaKnown RBP19.4■□□□□ 0.7
CLIP3-202ENST00000585466 LARGE2Q8N3Y3 721 aa19.4■□□□□ 0.7
CLIP3-202ENST00000585466 CDCA7LQ96GN5 454 aa19.4■□□□□ 0.7
CLIP3-202ENST00000585466 E9PSI1 815 aa19.39■□□□□ 0.69
CLIP3-202ENST00000585466 PPIP5K2O43314 1243 aa19.39■□□□□ 0.69
CLIP3-202ENST00000585466 CTSWP56202 376 aa19.39■□□□□ 0.69
CLIP3-202ENST00000585466 RPS8P62241 208 aaKnown RBP19.39■□□□□ 0.69
CLIP3-202ENST00000585466 KIAA2012Q0VF49 1180 aa19.39■□□□□ 0.69
CLIP3-202ENST00000585466 SMC1BQ8NDV3 1235 aa19.39■□□□□ 0.69
CLIP3-202ENST00000585466 LINS1Q8NG48 757 aa19.39■□□□□ 0.69
CLIP3-202ENST00000585466 TTLL11Q8NHH1 800 aa19.39■□□□□ 0.69
CLIP3-202ENST00000585466 JDP2Q8WYK2 163 aa19.39■□□□□ 0.69
CLIP3-202ENST00000585466 RTL9Q8NET4 1388 aa19.39■□□□□ 0.69
CLIP3-202ENST00000585466 HSP90B1P14625 803 aaKnown RBP19.38■□□□□ 0.69
CLIP3-202ENST00000585466 GPSM2P81274 684 aa19.38■□□□□ 0.69
CLIP3-202ENST00000585466 CCDC152Q4G0S7 254 aa19.38■□□□□ 0.69
CLIP3-202ENST00000585466 BEND3Q5T5X7 828 aa19.38■□□□□ 0.69
CLIP3-202ENST00000585466 UBE3BQ7Z3V4 1068 aa19.38■□□□□ 0.69
CLIP3-202ENST00000585466 GPC2Q8N158 579 aa19.38■□□□□ 0.69
CLIP3-202ENST00000585466 SUPT20HQ8NEM7 779 aa19.38■□□□□ 0.69
CLIP3-202ENST00000585466 PLA2G12BQ9BX93 195 aa19.38■□□□□ 0.69
CLIP3-202ENST00000585466 TAF1DQ9H5J8 278 aaPredicted RBP19.38■□□□□ 0.69
CLIP3-202ENST00000585466 POLLQ9UGP5 575 aa19.38■□□□□ 0.69
CLIP3-202ENST00000585466 CCDC85AQ96PX6 553 aaPredicted RBP19.37■□□□□ 0.69
CLIP3-202ENST00000585466 SCN9AQ15858 1988 aa19.36■□□□□ 0.69
CLIP3-202ENST00000585466 YDJCA8MPS7 323 aa19.36■□□□□ 0.69
CLIP3-202ENST00000585466 NIM1KQ8IY84 436 aa19.36■□□□□ 0.69
CLIP3-202ENST00000585466 MRPL50Q8N5N7 158 aaKnown RBP19.36■□□□□ 0.69
CLIP3-202ENST00000585466 TMX4Q9H1E5 349 aaPredicted RBP19.36■□□□□ 0.69
CLIP3-202ENST00000585466 GREM2Q9H772 168 aa19.36■□□□□ 0.69
CLIP3-202ENST00000585466 IQCA1LA6NCM1 817 aa19.35■□□□□ 0.69
CLIP3-202ENST00000585466 SCNN1DP51172 638 aa19.35■□□□□ 0.69
CLIP3-202ENST00000585466 APLP1P51693 650 aa19.35■□□□□ 0.69
CLIP3-202ENST00000585466 EIF6P56537 245 aaKnown RBP19.35■□□□□ 0.69
CLIP3-202ENST00000585466 PODXL2Q9NZ53 605 aa19.35■□□□□ 0.69
CLIP3-202ENST00000585466 ZNRF3Q9ULT6 936 aa19.35■□□□□ 0.69
CLIP3-202ENST00000585466 CXCL9Q07325 125 aa19.34■□□□□ 0.69
CLIP3-202ENST00000585466 MIER1Q8N108 512 aa19.34■□□□□ 0.69
CLIP3-202ENST00000585466 DNAJC5GQ8N7S2 189 aa19.34■□□□□ 0.69
CLIP3-202ENST00000585466 HACL1Q9UJ83 578 aa19.34■□□□□ 0.69
CLIP3-202ENST00000585466 NSFL1CQ9UNZ2 370 aaKnown RBP19.34■□□□□ 0.69
CLIP3-202ENST00000585466 CSF1RP07333 972 aa19.33■□□□□ 0.68
CLIP3-202ENST00000585466 HTRA3P83110 453 aa19.33■□□□□ 0.68
CLIP3-202ENST00000585466 TBC1D16Q8TBP0 767 aa19.33■□□□□ 0.68
CLIP3-202ENST00000585466 SSH1Q8WYL5 1049 aa19.33■□□□□ 0.68
CLIP3-202ENST00000585466 GPR101Q96P66 508 aaPredicted RBP19.33■□□□□ 0.68
CLIP3-202ENST00000585466 A0A1B0GUL6 1792 aa19.33■□□□□ 0.68
CLIP3-202ENST00000585466 EPHX2P34913 555 aa19.32■□□□□ 0.68
CLIP3-202ENST00000585466 DIEXFQ68CQ4 756 aaKnown RBP19.32■□□□□ 0.68
CLIP3-202ENST00000585466 CHADLQ6NUI6 762 aa19.32■□□□□ 0.68
CLIP3-202ENST00000585466 GJA3Q9Y6H8 435 aa19.32■□□□□ 0.68
CLIP3-202ENST00000585466 ZNF646O15015 1829 aaPredicted RBP19.32■□□□□ 0.68
CLIP3-202ENST00000585466 PSME4Q14997 1843 aa19.32■□□□□ 0.68
CLIP3-202ENST00000585466 WTIPA6NIX2 430 aaPredicted RBP19.31■□□□□ 0.68
CLIP3-202ENST00000585466 EPS15P42566 896 aa19.31■□□□□ 0.68
CLIP3-202ENST00000585466 FOXO4P98177 505 aa19.31■□□□□ 0.68
CLIP3-202ENST00000585466 LDHDQ86WU2 507 aa19.31■□□□□ 0.68
CLIP3-202ENST00000585466 ANKRD18AQ8IVF6 992 aa19.31■□□□□ 0.68
CLIP3-202ENST00000585466 WASHC4Q2M389 1173 aa19.3■□□□□ 0.68
CLIP3-202ENST00000585466 FAM161AQ3B820 660 aa19.3■□□□□ 0.68
CLIP3-202ENST00000585466 EPHA10Q5JZY3 1008 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms