RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	RASSF10	A6NK89	507 aa		21.32	■■□□□ 1
PRKAR1A-206	ENST00000585460	DUSP27	Q5VZP5	1158 aa		21.32	■■□□□ 1
PRKAR1A-206	ENST00000585460	GPRC5D	Q9NZD1	345 aa		21.32	■■□□□ 1
PRKAR1A-206	ENST00000585460	ATP5J2-PTCD1	G3V325	749 aa		21.31	■■□□□ 1
PRKAR1A-206	ENST00000585460	KIAA2012	Q0VF49	1180 aa		21.31	■■□□□ 1
PRKAR1A-206	ENST00000585460	FAM89A	Q96GI7	184 aa		21.31	■■□□□ 1
PRKAR1A-206	ENST00000585460	WBP1L	Q9NX94	342 aa		21.31	■■□□□ 1
PRKAR1A-206	ENST00000585460	ZNF853	P0CG23	659 aa		21.3	■■□□□ 1
PRKAR1A-206	ENST00000585460	PRKRIP1	Q9H875	184 aa	Predicted RBP	21.3	■■□□□ 1
PRKAR1A-206	ENST00000585460	MBIP	Q9NS73	344 aa		21.3	■■□□□ 1
PRKAR1A-206	ENST00000585460	HYPK	Q9NX55	129 aa		21.3	■■□□□ 1
PRKAR1A-206	ENST00000585460	ADAMTSL1	Q8N6G6	1762 aa		21.3	■■□□□ 1
PRKAR1A-206	ENST00000585460	GMPS	P49915	693 aa	Predicted RBP	21.29	■■□□□ 1
PRKAR1A-206	ENST00000585460	TRIM28	Q13263	835 aa	Known RBP	21.29	■■□□□ 1
PRKAR1A-206	ENST00000585460	SF3B3	Q15393	1217 aa	Known RBP	21.29	■■□□□ 1
PRKAR1A-206	ENST00000585460	CST9	Q5W186	159 aa		21.29	■■□□□ 1
PRKAR1A-206	ENST00000585460	ADARB2	Q9NS39	739 aa	Known RBP	21.29	■■□□□ 1
PRKAR1A-206	ENST00000585460	ABT1	Q9ULW3	272 aa	Known RBP	21.29	■■□□□ 1
PRKAR1A-206	ENST00000585460	TRAF5	O00463	557 aa		21.28	■■□□□ 1
PRKAR1A-206	ENST00000585460	RAD17	O75943	681 aa		21.28	■■□□□ 1
PRKAR1A-206	ENST00000585460	CIAPIN1	Q6FI81	312 aa		21.28	■■□□□ 1
PRKAR1A-206	ENST00000585460	WDR33	Q9C0J8	1336 aa	Known RBP	21.28	■■□□□ 1
PRKAR1A-206	ENST00000585460	APAF1	O14727	1248 aa		21.27	■■□□□ 1
PRKAR1A-206	ENST00000585460	TMC4	Q7Z404	712 aa		21.27	■■□□□ 1
PRKAR1A-206	ENST00000585460	CELF1	Q92879	486 aa	Known RBP	21.27	■■□□□ 1
PRKAR1A-206	ENST00000585460	PRDM10	Q9NQV6	1147 aa		21.27	■■□□□ 1
PRKAR1A-206	ENST00000585460	LTBP1	Q14766	1721 aa		21.26	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	YDJC	A8MPS7	323 aa		21.26	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	CTCF	P49711	727 aa	Predicted RBP	21.26	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	TNIP1	Q15025	636 aa		21.26	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	RTL5	Q5HYW3	569 aa	Predicted RBP	21.26	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	AIDA	Q96BJ3	306 aa		21.26	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	PGAP2	Q9UHJ9	254 aa		21.26	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	HIRA	P54198	1017 aa	Predicted RBP	21.25	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	ELL2	O00472	640 aa	Predicted RBP	21.24	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	BCL2L13	Q9BXK5	485 aa		21.24	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	PHAX	Q9H814	394 aa	Known RBP	21.24	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	NSFL1C	Q9UNZ2	370 aa	Known RBP	21.24	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	IRS4	O14654	1257 aa	Predicted RBP	21.23	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	LBX1	P52954	281 aa		21.23	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	WASHC4	Q2M389	1173 aa		21.23	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	RIC3	Q7Z5B4	369 aa		21.23	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	IFT57	Q9NWB7	429 aa		21.23	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	POLL	Q9UGP5	575 aa		21.23	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	CNOT7	Q9UIV1	285 aa	Known RBP	21.23	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	SHTN1	A0MZ66	631 aa		21.22	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	RPS8	P62241	208 aa	Known RBP	21.22	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	GNAI1	P63096	354 aa		21.22	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	GPSM2	P81274	684 aa		21.22	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	MAP2K1	Q02750	393 aa	Predicted RBP	21.22	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	C8orf58	Q8NAV2	365 aa		21.22	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	CAPNS2	Q96L46	248 aa		21.22	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	21.21	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	ZC3H15	Q8WU90	426 aa	Known RBP	21.21	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	GLIS2	Q9BZE0	524 aa	Predicted RBP	21.21	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	TLL2	Q9Y6L7	1015 aa		21.21	■□□□□ 0.99
PRKAR1A-206	ENST00000585460	C6orf229	H3BNL8	230 aa		21.2	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	RIMBP2	O15034	1052 aa		21.2	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	CYP4F22	Q6NT55	531 aa		21.2	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	TRPM4	Q8TD43	1214 aa		21.2	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	GPR101	Q96P66	508 aa	Predicted RBP	21.2	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	KCNQ5	Q9NR82	932 aa		21.2	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	ZBTB12	Q9Y330	459 aa	Predicted RBP	21.2	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	CDHR2	Q9BYE9	1310 aa		21.2	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	HSPA8	P11142	646 aa	Known RBP	21.19	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	ECE1	P42892	770 aa		21.19	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	CALD1	Q05682	793 aa	Known RBP	21.19	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	GOLGA2	Q08379	1002 aa		21.19	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	DBNDD1	Q9H9R9	158 aa		21.19	■□□□□ 0.98
PRKAR1A-206	ENST00000585460		H7C1D1	291 aa		21.18	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	PSMD14	O00487	310 aa		21.18	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	CELF2	O95319	508 aa	Known RBP	21.18	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	21.18	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	TBC1D16	Q8TBP0	767 aa		21.18	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	DPF2	Q92785	391 aa		21.18	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	JARID2	Q92833	1246 aa	Predicted RBP	21.18	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	MYD88	Q99836	296 aa		21.18	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	SEC31B	Q9NQW1	1179 aa		21.18	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	GRM1	Q13255	1194 aa		21.17	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	DOK7	Q18PE1	504 aa		21.17	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	CDC37L1	Q7L3B6	337 aa		21.17	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	SAPCD2	Q86UD0	394 aa		21.17	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	MICALL2	Q8IY33	904 aa		21.17	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	SAMD7	Q7Z3H4	446 aa		21.16	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	CCDC191	Q8NCU4	936 aa		21.16	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	AOC2	O75106	756 aa		21.15	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	PCCA	P05165	728 aa	Predicted RBP	21.15	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	DLK2	Q6UY11	383 aa		21.15	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	USP48	Q86UV5	1035 aa		21.15	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	TSPYL6	Q8N831	410 aa		21.15	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	EYA3	Q99504	573 aa		21.15	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	METTL22	Q9BUU2	404 aa	Predicted RBP	21.15	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	ANKRD36C	Q5JPF3	1778 aa		21.15	■□□□□ 0.98
PRKAR1A-206	ENST00000585460	ECE2	O60344	883 aa		21.14	■□□□□ 0.97
PRKAR1A-206	ENST00000585460	HSP90B1	P14625	803 aa	Known RBP	21.14	■□□□□ 0.97
PRKAR1A-206	ENST00000585460	MAP2K2	P36507	400 aa		21.14	■□□□□ 0.97
PRKAR1A-206	ENST00000585460	CCDC30	Q5VVM6	783 aa		21.14	■□□□□ 0.97
PRKAR1A-206	ENST00000585460	ZC3H12C	Q9C0D7	883 aa	Known RBP	21.14	■□□□□ 0.97
PRKAR1A-206	ENST00000585460	PODXL2	Q9NZ53	605 aa		21.14	■□□□□ 0.97
PRKAR1A-206	ENST00000585460	DUOX1	Q9NRD9	1551 aa		21.14	■□□□□ 0.97

Retrieved 100 of 20,778 RNA–protein pairs in 1092 ms