RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 PTPRCP08575 1304 aa20.7■□□□□ 0.9
ERBB2-222ENST00000584908 ZBED9Q6R2W3 1325 aa20.7■□□□□ 0.9
ERBB2-222ENST00000584908 F6X3S4 739 aa20.69■□□□□ 0.9
ERBB2-222ENST00000584908 PDE8AO60658 829 aa20.69■□□□□ 0.9
ERBB2-222ENST00000584908 BRPF1P55201 1214 aaPredicted RBP20.69■□□□□ 0.9
ERBB2-222ENST00000584908 FKBP4Q02790 459 aaKnown RBP eCLIP20.69■□□□□ 0.9
ERBB2-222ENST00000584908 GRAPQ13588 217 aa20.69■□□□□ 0.9
ERBB2-222ENST00000584908 GRAPLQ8TC17 118 aaPredicted RBP20.69■□□□□ 0.9
ERBB2-222ENST00000584908 PSMD1Q99460 953 aa20.69■□□□□ 0.9
ERBB2-222ENST00000584908 ATP6V0A2Q9Y487 856 aa20.69■□□□□ 0.9
ERBB2-222ENST00000584908 CASP7P55210 303 aa20.68■□□□□ 0.9
ERBB2-222ENST00000584908 TMC4Q7Z404 712 aa20.68■□□□□ 0.9
ERBB2-222ENST00000584908 COL4A1P02462 1669 aa20.67■□□□□ 0.9
ERBB2-222ENST00000584908 PLA2G12BQ9BX93 195 aa20.67■□□□□ 0.9
ERBB2-222ENST00000584908 SP8Q8IXZ3 490 aa20.66■□□□□ 0.9
ERBB2-222ENST00000584908 JARID2Q92833 1246 aaPredicted RBP20.66■□□□□ 0.9
ERBB2-222ENST00000584908 ALDH1L1O75891 902 aa20.65■□□□□ 0.9
ERBB2-222ENST00000584908 CCDC152Q4G0S7 254 aa20.65■□□□□ 0.9
ERBB2-222ENST00000584908 UBE3BQ7Z3V4 1068 aa20.65■□□□□ 0.9
ERBB2-222ENST00000584908 RTL9Q8NET4 1388 aa20.65■□□□□ 0.9
ERBB2-222ENST00000584908 RARSP54136 660 aaKnown RBP20.64■□□□□ 0.89
ERBB2-222ENST00000584908 CTSWP56202 376 aa20.64■□□□□ 0.89
ERBB2-222ENST00000584908 CELF1Q92879 486 aaKnown RBP20.64■□□□□ 0.89
ERBB2-222ENST00000584908 BCL2L13Q9BXK5 485 aa20.64■□□□□ 0.89
ERBB2-222ENST00000584908 SMC4Q9NTJ3 1288 aa20.64■□□□□ 0.89
ERBB2-222ENST00000584908 LTBP1Q14766 1721 aa20.63■□□□□ 0.89
ERBB2-222ENST00000584908 SLC51AQ86UW1 340 aa20.63■□□□□ 0.89
ERBB2-222ENST00000584908 TTLL11Q8NHH1 800 aa20.63■□□□□ 0.89
ERBB2-222ENST00000584908 GPBP1L1Q9HC44 474 aaPredicted RBP20.63■□□□□ 0.89
ERBB2-222ENST00000584908 RTFDC1Q9BY42 306 aaPredicted RBP20.62■□□□□ 0.89
ERBB2-222ENST00000584908 SRCIN1Q9C0H9 1055 aa20.62■□□□□ 0.89
ERBB2-222ENST00000584908 RPS8P62241 208 aaKnown RBP20.61■□□□□ 0.89
ERBB2-222ENST00000584908 TMX4Q9H1E5 349 aaPredicted RBP20.61■□□□□ 0.89
ERBB2-222ENST00000584908 VPS33BQ9H267 617 aa20.61■□□□□ 0.89
ERBB2-222ENST00000584908 SEC31BQ9NQW1 1179 aa20.61■□□□□ 0.89
ERBB2-222ENST00000584908 DUOX1Q9NRD9 1551 aa20.61■□□□□ 0.89
ERBB2-222ENST00000584908 ZNF277Q9NRM2 450 aaPredicted RBP20.61■□□□□ 0.89
ERBB2-222ENST00000584908 GRM8O00222 908 aa20.6■□□□□ 0.89
ERBB2-222ENST00000584908 CSF1RP07333 972 aa20.6■□□□□ 0.89
ERBB2-222ENST00000584908 IARSP41252 1262 aaKnown RBP20.6■□□□□ 0.89
ERBB2-222ENST00000584908 SLC4A10Q6U841 1118 aa20.6■□□□□ 0.89
ERBB2-222ENST00000584908 UTYO14607 1347 aa20.59■□□□□ 0.89
ERBB2-222ENST00000584908 KDM2BQ8NHM5 1336 aa20.59■□□□□ 0.89
ERBB2-222ENST00000584908 GLTPD2A6NH11 291 aa20.59■□□□□ 0.89
ERBB2-222ENST00000584908 WDR90Q96KV7 1748 aa20.58■□□□□ 0.89
ERBB2-222ENST00000584908 MPNDQ8N594 471 aa20.58■□□□□ 0.89
ERBB2-222ENST00000584908 ZNF526Q8TF50 670 aaPredicted RBP20.58■□□□□ 0.89
ERBB2-222ENST00000584908 COL4A5P29400 1685 aa20.58■□□□□ 0.89
ERBB2-222ENST00000584908 SPEF2Q9C093 1822 aa20.58■□□□□ 0.88
ERBB2-222ENST00000584908 KIF16BQ96L93 1317 aa20.57■□□□□ 0.88
ERBB2-222ENST00000584908 DPP8Q6V1X1 898 aaPredicted RBP20.57■□□□□ 0.88
ERBB2-222ENST00000584908 SUPT20HQ8NEM7 779 aa20.57■□□□□ 0.88
ERBB2-222ENST00000584908 ARHGAP45Q92619 1136 aa20.57■□□□□ 0.88
ERBB2-222ENST00000584908 GREM2Q9H772 168 aa20.57■□□□□ 0.88
ERBB2-222ENST00000584908 NOB1Q9ULX3 412 aaKnown RBP20.57■□□□□ 0.88
ERBB2-222ENST00000584908 FZD9O00144 591 aa20.56■□□□□ 0.88
ERBB2-222ENST00000584908 FOXO4P98177 505 aa20.56■□□□□ 0.88
ERBB2-222ENST00000584908 CCDC85AQ96PX6 553 aaPredicted RBP20.56■□□□□ 0.88
ERBB2-222ENST00000584908 CDC5LQ99459 802 aaKnown RBP20.56■□□□□ 0.88
ERBB2-222ENST00000584908 C9orf78Q9NZ63 289 aaPredicted RBP20.56■□□□□ 0.88
ERBB2-222ENST00000584908 KIF3CO14782 793 aa20.55■□□□□ 0.88
ERBB2-222ENST00000584908 DPY19L2Q6NUT2 758 aa20.55■□□□□ 0.88
ERBB2-222ENST00000584908 ANKRD18AQ8IVF6 992 aa20.55■□□□□ 0.88
ERBB2-222ENST00000584908 API5Q9BZZ5 524 aaKnown RBP20.55■□□□□ 0.88
ERBB2-222ENST00000584908 PODXL2Q9NZ53 605 aa20.55■□□□□ 0.88
ERBB2-222ENST00000584908 BSDC1Q9NW68 430 aaPredicted RBP20.54■□□□□ 0.88
ERBB2-222ENST00000584908 NBPF7P0C2Y1 421 aaPredicted RBP20.53■□□□□ 0.88
ERBB2-222ENST00000584908 KIAA2012Q0VF49 1180 aa20.53■□□□□ 0.88
ERBB2-222ENST00000584908 JDP2Q8WYK2 163 aa20.53■□□□□ 0.88
ERBB2-222ENST00000584908 NMRK2Q9NPI5 230 aa20.53■□□□□ 0.88
ERBB2-222ENST00000584908 ITGA6P23229 1130 aa20.53■□□□□ 0.88
ERBB2-222ENST00000584908 CCT4P50991 539 aaKnown RBP20.53■□□□□ 0.88
ERBB2-222ENST00000584908 GPSM2P81274 684 aa20.53■□□□□ 0.88
ERBB2-222ENST00000584908 FAM161AQ3B820 660 aa20.53■□□□□ 0.88
ERBB2-222ENST00000584908 EPHA10Q5JZY3 1008 aa20.53■□□□□ 0.88
ERBB2-222ENST00000584908 LARGE2Q8N3Y3 721 aa20.53■□□□□ 0.88
ERBB2-222ENST00000584908 KAZALD1Q96I82 304 aa20.53■□□□□ 0.88
ERBB2-222ENST00000584908 USP44Q9H0E7 712 aa20.53■□□□□ 0.88
ERBB2-222ENST00000584908 NSFL1CQ9UNZ2 370 aaKnown RBP20.53■□□□□ 0.88
ERBB2-222ENST00000584908 SCN4AP35499 1836 aa20.52■□□□□ 0.88
ERBB2-222ENST00000584908 PPIP5K2O43314 1243 aa20.52■□□□□ 0.87
ERBB2-222ENST00000584908 POLLQ9UGP5 575 aa20.52■□□□□ 0.87
ERBB2-222ENST00000584908 BCAR3O75815 825 aa20.51■□□□□ 0.87
ERBB2-222ENST00000584908 AOC3Q16853 763 aa20.51■□□□□ 0.87
ERBB2-222ENST00000584908 LMBR1LQ6UX01 489 aa20.51■□□□□ 0.87
ERBB2-222ENST00000584908 SUCLG2Q96I99 432 aa20.51■□□□□ 0.87
ERBB2-222ENST00000584908 L3MBTL3Q96JM7 780 aaPredicted RBP20.51■□□□□ 0.87
ERBB2-222ENST00000584908 A0A1B0GUL6 1792 aa20.5■□□□□ 0.87
ERBB2-222ENST00000584908 ZNF541Q9H0D2 1346 aa20.5■□□□□ 0.87
ERBB2-222ENST00000584908 POTECB2RU33 542 aa20.5■□□□□ 0.87
ERBB2-222ENST00000584908 IPO8O15397 1037 aaKnown RBP20.5■□□□□ 0.87
ERBB2-222ENST00000584908 RABL6Q3YEC7 729 aaPredicted RBP20.5■□□□□ 0.87
ERBB2-222ENST00000584908 TBC1D16Q8TBP0 767 aa20.5■□□□□ 0.87
ERBB2-222ENST00000584908 XDHP47989 1333 aa20.49■□□□□ 0.87
ERBB2-222ENST00000584908 ANKRD18BA2A2Z9 1011 aa20.49■□□□□ 0.87
ERBB2-222ENST00000584908 DDNO94850 711 aaPredicted RBP20.49■□□□□ 0.87
ERBB2-222ENST00000584908 VEGFAP15692 232 aaPredicted RBP20.49■□□□□ 0.87
ERBB2-222ENST00000584908 IGHMBP2P38935 993 aaKnown RBP20.49■□□□□ 0.87
ERBB2-222ENST00000584908 IFIT5Q13325 482 aaKnown RBP20.49■□□□□ 0.87
ERBB2-222ENST00000584908 INTS3Q68E01 1043 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms