RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.85
SKA2-209ENST00000583976 CXCL9Q07325 125 aa20.38■□□□□ 0.85
SKA2-209ENST00000583976 GRAPQ13588 217 aa20.38■□□□□ 0.85
SKA2-209ENST00000583976 GRAPLQ8TC17 118 aaPredicted RBP20.38■□□□□ 0.85
SKA2-209ENST00000583976 RUNDC1Q96C34 613 aa20.38■□□□□ 0.85
SKA2-209ENST00000583976 GPRC5DQ9NZD1 345 aa20.38■□□□□ 0.85
SKA2-209ENST00000583976 ATP5J2-PTCD1G3V325 749 aa20.37■□□□□ 0.85
SKA2-209ENST00000583976 GMPSP49915 693 aaPredicted RBP20.37■□□□□ 0.85
SKA2-209ENST00000583976 AIDAQ96BJ3 306 aa20.37■□□□□ 0.85
SKA2-209ENST00000583976 SHTN1A0MZ66 631 aa20.36■□□□□ 0.85
SKA2-209ENST00000583976 KIAA2012Q0VF49 1180 aa20.36■□□□□ 0.85
SKA2-209ENST00000583976 DDX46Q7L014 1031 aaKnown RBP20.36■□□□□ 0.85
SKA2-209ENST00000583976 MPNDQ8N594 471 aa20.36■□□□□ 0.85
SKA2-209ENST00000583976 TMX4Q9H1E5 349 aaPredicted RBP20.36■□□□□ 0.85
SKA2-209ENST00000583976 ZNRF3Q9ULT6 936 aa20.36■□□□□ 0.85
SKA2-209ENST00000583976 WDR33Q9C0J8 1336 aaKnown RBP20.35■□□□□ 0.85
SKA2-209ENST00000583976 YDJCA8MPS7 323 aa20.35■□□□□ 0.85
SKA2-209ENST00000583976 RAD17O75943 681 aa20.35■□□□□ 0.85
SKA2-209ENST00000583976 DEFB115Q30KQ5 88 aa20.35■□□□□ 0.85
SKA2-209ENST00000583976 RTL5Q5HYW3 569 aaPredicted RBP20.35■□□□□ 0.85
SKA2-209ENST00000583976 USP50Q70EL3 339 aaPredicted RBP20.35■□□□□ 0.85
SKA2-209ENST00000583976 SP8Q8IXZ3 490 aa20.35■□□□□ 0.85
SKA2-209ENST00000583976 SUPT20HQ8NEM7 779 aa20.35■□□□□ 0.85
SKA2-209ENST00000583976 WBP1LQ9NX94 342 aa20.35■□□□□ 0.85
SKA2-209ENST00000583976 CTCFP49711 727 aaPredicted RBP20.34■□□□□ 0.85
SKA2-209ENST00000583976 LBX1P52954 281 aa20.34■□□□□ 0.85
SKA2-209ENST00000583976 GRM1Q13255 1194 aa20.34■□□□□ 0.85
SKA2-209ENST00000583976 PAXIP1Q6ZW49 1069 aaPredicted RBP20.34■□□□□ 0.85
SKA2-209ENST00000583976 PLBD2Q8NHP8 589 aa20.34■□□□□ 0.85
SKA2-209ENST00000583976 TRPM4Q8TD43 1214 aa20.34■□□□□ 0.85
SKA2-209ENST00000583976 CELF1Q92879 486 aaKnown RBP20.34■□□□□ 0.85
SKA2-209ENST00000583976 FAM89AQ96GI7 184 aa20.34■□□□□ 0.85
SKA2-209ENST00000583976 ISCA1Q9BUE6 129 aa20.34■□□□□ 0.85
SKA2-209ENST00000583976 ADARB2Q9NS39 739 aaKnown RBP20.34■□□□□ 0.85
SKA2-209ENST00000583976 MBIPQ9NS73 344 aa20.34■□□□□ 0.85
SKA2-209ENST00000583976 BBOX1O75936 387 aa20.33■□□□□ 0.85
SKA2-209ENST00000583976 HSPA8P11142 646 aaKnown RBP20.33■□□□□ 0.85
SKA2-209ENST00000583976 DUSP27Q5VZP5 1158 aa20.33■□□□□ 0.85
SKA2-209ENST00000583976 CST9Q5W186 159 aa20.33■□□□□ 0.85
SKA2-209ENST00000583976 HOXB7P09629 217 aa20.32■□□□□ 0.84
SKA2-209ENST00000583976 CIAPIN1Q6FI81 312 aa20.32■□□□□ 0.84
SKA2-209ENST00000583976 CYP4F22Q6NT55 531 aa20.32■□□□□ 0.84
SKA2-209ENST00000583976 MIER1Q8N108 512 aa20.32■□□□□ 0.84
SKA2-209ENST00000583976 CAPNS2Q96L46 248 aa20.32■□□□□ 0.84
SKA2-209ENST00000583976 GPR101Q96P66 508 aaPredicted RBP20.32■□□□□ 0.84
SKA2-209ENST00000583976 GLIS2Q9BZE0 524 aaPredicted RBP20.32■□□□□ 0.84
SKA2-209ENST00000583976 PRDM10Q9NQV6 1147 aa20.32■□□□□ 0.84
SKA2-209ENST00000583976 DBF4Q9UBU7 674 aaPredicted RBP20.32■□□□□ 0.84
SKA2-209ENST00000583976 ANKRD13DQ6ZTN6 518 aa20.31■□□□□ 0.84
SKA2-209ENST00000583976 VPS33BQ9H267 617 aa20.31■□□□□ 0.84
SKA2-209ENST00000583976 SCN9AQ15858 1988 aa20.3■□□□□ 0.84
SKA2-209ENST00000583976 HIRAP54198 1017 aaPredicted RBP20.3■□□□□ 0.84
SKA2-209ENST00000583976 CFAP44Q96MT7 982 aa20.3■□□□□ 0.84
SKA2-209ENST00000583976 CDHR2Q9BYE9 1310 aa20.29■□□□□ 0.84
SKA2-209ENST00000583976 FAM9BQ8IZU0 186 aa20.29■□□□□ 0.84
SKA2-209ENST00000583976 BCL2L13Q9BXK5 485 aa20.29■□□□□ 0.84
SKA2-209ENST00000583976 DBNDD1Q9H9R9 158 aa20.29■□□□□ 0.84
SKA2-209ENST00000583976 ZBTB12Q9Y330 459 aaPredicted RBP20.29■□□□□ 0.84
SKA2-209ENST00000583976 TLL2Q9Y6L7 1015 aa20.29■□□□□ 0.84
SKA2-209ENST00000583976 GPSM2P81274 684 aa20.28■□□□□ 0.84
SKA2-209ENST00000583976 RTL9Q8NET4 1388 aa20.27■□□□□ 0.84
SKA2-209ENST00000583976 IRS4O14654 1257 aaPredicted RBP20.27■□□□□ 0.84
SKA2-209ENST00000583976 APAF1O14727 1248 aa20.27■□□□□ 0.84
SKA2-209ENST00000583976 AOC2O75106 756 aa20.27■□□□□ 0.84
SKA2-209ENST00000583976 CELF2O95319 508 aaKnown RBP20.27■□□□□ 0.84
SKA2-209ENST00000583976 ZNF853P0CG23 659 aa20.27■□□□□ 0.84
SKA2-209ENST00000583976 SF3B3Q15393 1217 aaKnown RBP20.27■□□□□ 0.84
SKA2-209ENST00000583976 DLK2Q6UY11 383 aa20.27■□□□□ 0.84
SKA2-209ENST00000583976 MICALL2Q8IY33 904 aa20.27■□□□□ 0.84
SKA2-209ENST00000583976 PHAXQ9H814 394 aaKnown RBP20.27■□□□□ 0.84
SKA2-209ENST00000583976 ZNF408Q9H9D4 720 aa20.27■□□□□ 0.84
SKA2-209ENST00000583976 HYPKQ9NX55 129 aa20.27■□□□□ 0.84
SKA2-209ENST00000583976 POLLQ9UGP5 575 aa20.27■□□□□ 0.84
SKA2-209ENST00000583976 NSFL1CQ9UNZ2 370 aaKnown RBP20.27■□□□□ 0.84
SKA2-209ENST00000583976 SPEF2Q9C093 1822 aa20.26■□□□□ 0.83
SKA2-209ENST00000583976 ELL2O00472 640 aaPredicted RBP20.26■□□□□ 0.83
SKA2-209ENST00000583976 RIMBP2O15034 1052 aa20.26■□□□□ 0.83
SKA2-209ENST00000583976 EGFRP00533 1210 aa20.26■□□□□ 0.83
SKA2-209ENST00000583976 TMC4Q7Z404 712 aa20.26■□□□□ 0.83
SKA2-209ENST00000583976 TSKSQ9UJT2 592 aa20.26■□□□□ 0.83
SKA2-209ENST00000583976 CCER2I3L3R5 266 aa20.25■□□□□ 0.83
SKA2-209ENST00000583976 PSMD14O00487 310 aa20.25■□□□□ 0.83
SKA2-209ENST00000583976 MAP2K1Q02750 393 aaPredicted RBP20.25■□□□□ 0.83
SKA2-209ENST00000583976 TNIP1Q15025 636 aa20.25■□□□□ 0.83
SKA2-209ENST00000583976 C6orf229H3BNL8 230 aa20.24■□□□□ 0.83
SKA2-209ENST00000583976 ECE1P42892 770 aa20.24■□□□□ 0.83
SKA2-209ENST00000583976 GOLGA2Q08379 1002 aa20.24■□□□□ 0.83
SKA2-209ENST00000583976 DOK7Q18PE1 504 aa20.24■□□□□ 0.83
SKA2-209ENST00000583976 WASHC4Q2M389 1173 aa20.24■□□□□ 0.83
SKA2-209ENST00000583976 RIC3Q7Z5B4 369 aa20.24■□□□□ 0.83
SKA2-209ENST00000583976 SAPCD2Q86UD0 394 aa20.24■□□□□ 0.83
SKA2-209ENST00000583976 JARID2Q92833 1246 aaPredicted RBP20.24■□□□□ 0.83
SKA2-209ENST00000583976 MYD88Q99836 296 aa20.24■□□□□ 0.83
SKA2-209ENST00000583976 SEC31BQ9NQW1 1179 aa20.24■□□□□ 0.83
SKA2-209ENST00000583976 KCNQ5Q9NR82 932 aa20.24■□□□□ 0.83
SKA2-209ENST00000583976 IFT57Q9NWB7 429 aa20.24■□□□□ 0.83
SKA2-209ENST00000583976 PGAP2Q9UHJ9 254 aa20.24■□□□□ 0.83
SKA2-209ENST00000583976 CNOT7Q9UIV1 285 aaKnown RBP20.24■□□□□ 0.83
SKA2-209ENST00000583976 ECE2O60344 883 aa20.23■□□□□ 0.83
SKA2-209ENST00000583976 SAMD7Q7Z3H4 446 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms