RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 DPY19L2Q6NUT2 758 aa24■■□□□ 1.43
LIMS2-218ENST00000582671 DDNO94850 711 aaPredicted RBP23.99■■□□□ 1.43
LIMS2-218ENST00000582671 GRIPAP1Q4V328 841 aa23.99■■□□□ 1.43
LIMS2-218ENST00000582671 SP8Q8IXZ3 490 aa23.99■■□□□ 1.43
LIMS2-218ENST00000582671 CELF1Q92879 486 aaKnown RBP23.99■■□□□ 1.43
LIMS2-218ENST00000582671 SCN4AP35499 1836 aa23.98■■□□□ 1.43
LIMS2-218ENST00000582671 SPEF2Q9C093 1822 aa23.98■■□□□ 1.43
LIMS2-218ENST00000582671 FKBP5Q13451 457 aaPredicted RBP23.98■■□□□ 1.43
LIMS2-218ENST00000582671 ZNF541Q9H0D2 1346 aa23.98■■□□□ 1.43
LIMS2-218ENST00000582671 NEURL1BA8MQ27 555 aa23.97■■□□□ 1.43
LIMS2-218ENST00000582671 NEXNQ0ZGT2 675 aa23.97■■□□□ 1.43
LIMS2-218ENST00000582671 LTBP1Q14766 1721 aa23.97■■□□□ 1.43
LIMS2-218ENST00000582671 DUOX1Q9NRD9 1551 aa23.97■■□□□ 1.43
LIMS2-218ENST00000582671 VEGFAP15692 232 aaPredicted RBP23.96■■□□□ 1.43
LIMS2-218ENST00000582671 CDHR2Q9BYE9 1310 aa23.95■■□□□ 1.42
LIMS2-218ENST00000582671 FZD9O00144 591 aa23.95■■□□□ 1.42
LIMS2-218ENST00000582671 PDE8AO60658 829 aa23.95■■□□□ 1.42
LIMS2-218ENST00000582671 SLFN5Q08AF3 891 aa23.95■■□□□ 1.42
LIMS2-218ENST00000582671 C16orf71Q8IYS4 520 aaPredicted RBP23.95■■□□□ 1.42
LIMS2-218ENST00000582671 RBM46Q8TBY0 533 aaKnown RBP23.95■■□□□ 1.42
LIMS2-218ENST00000582671 DNAAF4Q8WXU2 420 aa23.95■■□□□ 1.42
LIMS2-218ENST00000582671 CDCA7LQ96GN5 454 aa23.95■■□□□ 1.42
LIMS2-218ENST00000582671 TMX4Q9H1E5 349 aaPredicted RBP23.95■■□□□ 1.42
LIMS2-218ENST00000582671 DIEXFQ68CQ4 756 aaKnown RBP23.94■■□□□ 1.42
LIMS2-218ENST00000582671 RTFDC1Q9BY42 306 aaPredicted RBP23.94■■□□□ 1.42
LIMS2-218ENST00000582671 SEC31BQ9NQW1 1179 aa23.94■■□□□ 1.42
LIMS2-218ENST00000582671 E9PSI1 815 aa23.93■■□□□ 1.42
LIMS2-218ENST00000582671 H7C1W4 665 aa23.93■■□□□ 1.42
LIMS2-218ENST00000582671 MIER1Q8N108 512 aa23.93■■□□□ 1.42
LIMS2-218ENST00000582671 MPNDQ8N594 471 aa23.93■■□□□ 1.42
LIMS2-218ENST00000582671 CCDC85AQ96PX6 553 aaPredicted RBP23.93■■□□□ 1.42
LIMS2-218ENST00000582671 F6X3S4 739 aa23.92■■□□□ 1.42
LIMS2-218ENST00000582671 HSPA6P17066 643 aa23.92■■□□□ 1.42
LIMS2-218ENST00000582671 DPP8Q6V1X1 898 aaPredicted RBP23.92■■□□□ 1.42
LIMS2-218ENST00000582671 TMC4Q7Z404 712 aa23.92■■□□□ 1.42
LIMS2-218ENST00000582671 LARGE2Q8N3Y3 721 aa23.92■■□□□ 1.42
LIMS2-218ENST00000582671 JDP2Q8WYK2 163 aa23.92■■□□□ 1.42
LIMS2-218ENST00000582671 PPIP5K2O43314 1243 aa23.91■■□□□ 1.42
LIMS2-218ENST00000582671 HSP90B1P14625 803 aaKnown RBP23.91■■□□□ 1.42
LIMS2-218ENST00000582671 GCKRQ14397 625 aa23.91■■□□□ 1.42
LIMS2-218ENST00000582671 AOC3Q16853 763 aa23.91■■□□□ 1.42
LIMS2-218ENST00000582671 RPS8P62241 208 aaKnown RBP23.9■■□□□ 1.42
LIMS2-218ENST00000582671 UBE3BQ7Z3V4 1068 aa23.9■■□□□ 1.42
LIMS2-218ENST00000582671 LINS1Q8NG48 757 aa23.9■■□□□ 1.42
LIMS2-218ENST00000582671 L3MBTL3Q96JM7 780 aaPredicted RBP23.9■■□□□ 1.42
LIMS2-218ENST00000582671 CASP7P55210 303 aa23.89■■□□□ 1.41
LIMS2-218ENST00000582671 CCDC152Q4G0S7 254 aa23.89■■□□□ 1.41
LIMS2-218ENST00000582671 SUPT20HQ8NEM7 779 aa23.89■■□□□ 1.41
LIMS2-218ENST00000582671 CTSWP56202 376 aa23.88■■□□□ 1.41
LIMS2-218ENST00000582671 GPSM2P81274 684 aa23.88■■□□□ 1.41
LIMS2-218ENST00000582671 BEND3Q5T5X7 828 aa23.88■■□□□ 1.41
LIMS2-218ENST00000582671 TRMT2AQ8IZ69 625 aaKnown RBP23.88■■□□□ 1.41
LIMS2-218ENST00000582671 TTLL11Q8NHH1 800 aa23.88■■□□□ 1.41
LIMS2-218ENST00000582671 VPS33BQ9H267 617 aa23.88■■□□□ 1.41
LIMS2-218ENST00000582671 FSTL1Q12841 308 aa23.87■■□□□ 1.41
LIMS2-218ENST00000582671 NIM1KQ8IY84 436 aa23.87■■□□□ 1.41
LIMS2-218ENST00000582671 NSFL1CQ9UNZ2 370 aaKnown RBP23.87■■□□□ 1.41
LIMS2-218ENST00000582671 EIF6P56537 245 aaKnown RBP23.86■■□□□ 1.41
LIMS2-218ENST00000582671 KIAA2012Q0VF49 1180 aa23.86■■□□□ 1.41
LIMS2-218ENST00000582671 GPC2Q8N158 579 aa23.86■■□□□ 1.41
LIMS2-218ENST00000582671 MRPL50Q8N5N7 158 aaKnown RBP23.86■■□□□ 1.41
LIMS2-218ENST00000582671 SMC1BQ8NDV3 1235 aa23.86■■□□□ 1.41
LIMS2-218ENST00000582671 ADAMTSL1Q8N6G6 1762 aa23.86■■□□□ 1.41
LIMS2-218ENST00000582671 POTEIP0CG38 1075 aa23.85■■□□□ 1.41
LIMS2-218ENST00000582671 POTEJP0CG39 1038 aa23.85■■□□□ 1.41
LIMS2-218ENST00000582671 GREM2Q9H772 168 aa23.85■■□□□ 1.41
LIMS2-218ENST00000582671 SSH1Q8WYL5 1049 aa23.84■■□□□ 1.41
LIMS2-218ENST00000582671 PLA2G12BQ9BX93 195 aa23.84■■□□□ 1.41
LIMS2-218ENST00000582671 TAF1DQ9H5J8 278 aaPredicted RBP23.84■■□□□ 1.41
LIMS2-218ENST00000582671 POLLQ9UGP5 575 aa23.84■■□□□ 1.41
LIMS2-218ENST00000582671 GJA3Q9Y6H8 435 aa23.84■■□□□ 1.41
LIMS2-218ENST00000582671 IQCA1LA6NCM1 817 aa23.83■■□□□ 1.41
LIMS2-218ENST00000582671 ZNRF3Q9ULT6 936 aa23.83■■□□□ 1.41
LIMS2-218ENST00000582671 RTL9Q8NET4 1388 aa23.82■■□□□ 1.4
LIMS2-218ENST00000582671 ANKRD18AQ8IVF6 992 aa23.82■■□□□ 1.4
LIMS2-218ENST00000582671 TBC1D16Q8TBP0 767 aa23.82■■□□□ 1.4
LIMS2-218ENST00000582671 GPR101Q96P66 508 aaPredicted RBP23.82■■□□□ 1.4
LIMS2-218ENST00000582671 SCN9AQ15858 1988 aa23.82■■□□□ 1.4
LIMS2-218ENST00000582671 CXCL9Q07325 125 aa23.81■■□□□ 1.4
LIMS2-218ENST00000582671 BCL2L13Q9BXK5 485 aa23.81■■□□□ 1.4
LIMS2-218ENST00000582671 HACL1Q9UJ83 578 aa23.81■■□□□ 1.4
LIMS2-218ENST00000582671 A0A1B0GUL6 1792 aa23.8■■□□□ 1.4
LIMS2-218ENST00000582671 C6orf229H3BNL8 230 aa23.8■■□□□ 1.4
LIMS2-218ENST00000582671 RIMBP2O15034 1052 aa23.8■■□□□ 1.4
LIMS2-218ENST00000582671 CSF1RP07333 972 aa23.8■■□□□ 1.4
LIMS2-218ENST00000582671 WASHC4Q2M389 1173 aa23.8■■□□□ 1.4
LIMS2-218ENST00000582671 SLC4A10Q6U841 1118 aa23.8■■□□□ 1.4
LIMS2-218ENST00000582671 PODXL2Q9NZ53 605 aa23.8■■□□□ 1.4
LIMS2-218ENST00000582671 YDJCA8MPS7 323 aa23.79■■□□□ 1.4
LIMS2-218ENST00000582671 EPHX2P34913 555 aa23.79■■□□□ 1.4
LIMS2-218ENST00000582671 SCNN1DP51172 638 aa23.79■■□□□ 1.4
LIMS2-218ENST00000582671 APLP1P51693 650 aa23.79■■□□□ 1.4
LIMS2-218ENST00000582671 CDC5LQ99459 802 aaKnown RBP23.79■■□□□ 1.4
LIMS2-218ENST00000582671 PSME4Q14997 1843 aa23.79■■□□□ 1.4
LIMS2-218ENST00000582671 FOXO4P98177 505 aa23.78■■□□□ 1.4
LIMS2-218ENST00000582671 FAM161AQ3B820 660 aa23.78■■□□□ 1.4
LIMS2-218ENST00000582671 CHADLQ6NUI6 762 aa23.78■■□□□ 1.4
LIMS2-218ENST00000582671 GRM8O00222 908 aa23.77■■□□□ 1.4
LIMS2-218ENST00000582671 ALDH1L1O75891 902 aa23.77■■□□□ 1.4
LIMS2-218ENST00000582671 HTRA3P83110 453 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms