RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 ADAMTSL1Q8N6G6 1762 aa17.57■□□□□ 0.4
PGAP3-207ENST00000580898 COL4A5P29400 1685 aa17.57■□□□□ 0.4
PGAP3-207ENST00000580898 SCNN1DP51172 638 aa17.56■□□□□ 0.4
PGAP3-207ENST00000580898 KIAA2012Q0VF49 1180 aa17.56■□□□□ 0.4
PGAP3-207ENST00000580898 TRIM28Q13263 835 aaKnown RBP17.56■□□□□ 0.4
PGAP3-207ENST00000580898 MAP1SQ66K74 1059 aaPredicted RBP17.56■□□□□ 0.4
PGAP3-207ENST00000580898 LAMB2P55268 1798 aa17.56■□□□□ 0.4
PGAP3-207ENST00000580898 CDHR2Q9BYE9 1310 aa17.55■□□□□ 0.4
PGAP3-207ENST00000580898 ATP5J2-PTCD1G3V325 749 aa17.55■□□□□ 0.4
PGAP3-207ENST00000580898 DDX58O95786 925 aaKnown RBP17.55■□□□□ 0.4
PGAP3-207ENST00000580898 TNIP1Q15025 636 aa17.55■□□□□ 0.4
PGAP3-207ENST00000580898 SF3B3Q15393 1217 aaKnown RBP17.55■□□□□ 0.4
PGAP3-207ENST00000580898 FAM89AQ96GI7 184 aa17.55■□□□□ 0.4
PGAP3-207ENST00000580898 ADARB2Q9NS39 739 aaKnown RBP17.55■□□□□ 0.4
PGAP3-207ENST00000580898 EPS15P42566 896 aa17.54■□□□□ 0.4
PGAP3-207ENST00000580898 COL13A1Q5TAT6 717 aaPredicted RBP17.54■□□□□ 0.4
PGAP3-207ENST00000580898 CCDC30Q5VVM6 783 aa17.54■□□□□ 0.4
PGAP3-207ENST00000580898 CIAPIN1Q6FI81 312 aa17.54■□□□□ 0.4
PGAP3-207ENST00000580898 IRS4O14654 1257 aaPredicted RBP17.53■□□□□ 0.4
PGAP3-207ENST00000580898 CXCL9Q07325 125 aa17.53■□□□□ 0.4
PGAP3-207ENST00000580898 TNS4Q8IZW8 715 aa17.53■□□□□ 0.4
PGAP3-207ENST00000580898 AIDAQ96BJ3 306 aa17.53■□□□□ 0.4
PGAP3-207ENST00000580898 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
PGAP3-207ENST00000580898 GPRC5DQ9NZD1 345 aa17.53■□□□□ 0.4
PGAP3-207ENST00000580898 ELL2O00472 640 aaPredicted RBP17.52■□□□□ 0.4
PGAP3-207ENST00000580898 ZEB1P37275 1124 aaPredicted RBP17.52■□□□□ 0.4
PGAP3-207ENST00000580898 SLC51AQ86UW1 340 aa17.52■□□□□ 0.4
PGAP3-207ENST00000580898 ZBTB38Q8NAP3 1195 aaPredicted RBP17.52■□□□□ 0.4
PGAP3-207ENST00000580898 ABT1Q9ULW3 272 aaKnown RBP17.52■□□□□ 0.4
PGAP3-207ENST00000580898 WASHC4Q2M389 1173 aa17.51■□□□□ 0.39
PGAP3-207ENST00000580898 DEFB115Q30KQ5 88 aa17.51■□□□□ 0.39
PGAP3-207ENST00000580898 RTL5Q5HYW3 569 aaPredicted RBP17.51■□□□□ 0.39
PGAP3-207ENST00000580898 DDX60Q8IY21 1712 aaKnown RBP17.51■□□□□ 0.39
PGAP3-207ENST00000580898 CCDC191Q8NCU4 936 aa17.51■□□□□ 0.39
PGAP3-207ENST00000580898 ZNF428Q96B54 188 aa17.51■□□□□ 0.39
PGAP3-207ENST00000580898 EYA3Q99504 573 aa17.51■□□□□ 0.39
PGAP3-207ENST00000580898 PHAXQ9H814 394 aaKnown RBP17.51■□□□□ 0.39
PGAP3-207ENST00000580898 NSFL1CQ9UNZ2 370 aaKnown RBP17.51■□□□□ 0.39
PGAP3-207ENST00000580898 LTBP1Q14766 1721 aa17.5■□□□□ 0.39
PGAP3-207ENST00000580898 RASSF10A6NK89 507 aa17.5■□□□□ 0.39
PGAP3-207ENST00000580898 VEGFBP49765 207 aa17.5■□□□□ 0.39
PGAP3-207ENST00000580898 GMPSP49915 693 aaPredicted RBP17.5■□□□□ 0.39
PGAP3-207ENST00000580898 MYD88Q99836 296 aa17.5■□□□□ 0.39
PGAP3-207ENST00000580898 STK31Q9BXU1 1019 aa17.5■□□□□ 0.39
PGAP3-207ENST00000580898 LRRC37AA6NMS7 1700 aa17.5■□□□□ 0.39
PGAP3-207ENST00000580898 C6orf229H3BNL8 230 aa17.49■□□□□ 0.39
PGAP3-207ENST00000580898 RAD17O75943 681 aa17.49■□□□□ 0.39
PGAP3-207ENST00000580898 CCDC27Q2M243 656 aa17.49■□□□□ 0.39
PGAP3-207ENST00000580898 CCDC152Q4G0S7 254 aa17.49■□□□□ 0.39
PGAP3-207ENST00000580898 CELF1Q92879 486 aaKnown RBP17.49■□□□□ 0.39
PGAP3-207ENST00000580898 CWC25Q9NXE8 425 aaPredicted RBP17.49■□□□□ 0.39
PGAP3-207ENST00000580898 H7C1D1 291 aa17.48■□□□□ 0.39
PGAP3-207ENST00000580898 PCCAP05165 728 aaPredicted RBP17.48■□□□□ 0.39
PGAP3-207ENST00000580898 RPS8P62241 208 aaKnown RBP17.48■□□□□ 0.39
PGAP3-207ENST00000580898 C8orf58Q8NAV2 365 aa17.48■□□□□ 0.39
PGAP3-207ENST00000580898 PDE8AO60658 829 aa17.47■□□□□ 0.39
PGAP3-207ENST00000580898 ECE1P42892 770 aa17.47■□□□□ 0.39
PGAP3-207ENST00000580898 NEXNQ0ZGT2 675 aa17.47■□□□□ 0.39
PGAP3-207ENST00000580898 ZC3H15Q8WU90 426 aaKnown RBP17.47■□□□□ 0.39
PGAP3-207ENST00000580898 METTL22Q9BUU2 404 aaPredicted RBP17.47■□□□□ 0.39
PGAP3-207ENST00000580898 DUOX1Q9NRD9 1551 aa17.46■□□□□ 0.39
PGAP3-207ENST00000580898 G3V3G9 751 aa17.46■□□□□ 0.39
PGAP3-207ENST00000580898 CTCFP49711 727 aaPredicted RBP17.46■□□□□ 0.39
PGAP3-207ENST00000580898 MAP2K1Q02750 393 aaPredicted RBP17.46■□□□□ 0.39
PGAP3-207ENST00000580898 DCAF8Q5TAQ9 597 aa17.46■□□□□ 0.39
PGAP3-207ENST00000580898 PAXIP1Q6ZW49 1069 aaPredicted RBP17.46■□□□□ 0.39
PGAP3-207ENST00000580898 RIMBP2O15034 1052 aa17.45■□□□□ 0.38
PGAP3-207ENST00000580898 GPSM2P81274 684 aa17.45■□□□□ 0.38
PGAP3-207ENST00000580898 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
PGAP3-207ENST00000580898 DPF2Q92785 391 aa17.45■□□□□ 0.38
PGAP3-207ENST00000580898 ZC3H12CQ9C0D7 883 aaKnown RBP17.45■□□□□ 0.38
PGAP3-207ENST00000580898 ANKIB1Q9P2G1 1089 aa17.45■□□□□ 0.38
PGAP3-207ENST00000580898 CNOT7Q9UIV1 285 aaKnown RBP17.45■□□□□ 0.38
PGAP3-207ENST00000580898 MAP3K2Q9Y2U5 619 aa17.45■□□□□ 0.38
PGAP3-207ENST00000580898 WDR33Q9C0J8 1336 aaKnown RBP17.45■□□□□ 0.38
PGAP3-207ENST00000580898 YDJCA8MPS7 323 aa17.44■□□□□ 0.38
PGAP3-207ENST00000580898 ANP32CO43423 234 aa17.44■□□□□ 0.38
PGAP3-207ENST00000580898 RPS12P25398 132 aaKnown RBP17.44■□□□□ 0.38
PGAP3-207ENST00000580898 KSR2Q6VAB6 950 aa17.44■□□□□ 0.38
PGAP3-207ENST00000580898 WWC1Q8IX03 1113 aa17.44■□□□□ 0.38
PGAP3-207ENST00000580898 DBNDD1Q9H9R9 158 aa17.44■□□□□ 0.38
PGAP3-207ENST00000580898 PRDM10Q9NQV6 1147 aa17.44■□□□□ 0.38
PGAP3-207ENST00000580898 PODXL2Q9NZ53 605 aa17.44■□□□□ 0.38
PGAP3-207ENST00000580898 IL16Q14005 1332 aa17.44■□□□□ 0.38
PGAP3-207ENST00000580898 FOXN1O15353 648 aa17.43■□□□□ 0.38
PGAP3-207ENST00000580898 ECE2O60344 883 aa17.43■□□□□ 0.38
PGAP3-207ENST00000580898 TWISTNBQ3B726 338 aaPredicted RBP17.43■□□□□ 0.38
PGAP3-207ENST00000580898 CDC37L1Q7L3B6 337 aa17.43■□□□□ 0.38
PGAP3-207ENST00000580898 ANKRD18AQ8IVF6 992 aa17.43■□□□□ 0.38
PGAP3-207ENST00000580898 MICALL2Q8IY33 904 aa17.43■□□□□ 0.38
PGAP3-207ENST00000580898 TBC1D16Q8TBP0 767 aa17.43■□□□□ 0.38
PGAP3-207ENST00000580898 TSR2Q969E8 191 aaKnown RBP17.43■□□□□ 0.38
PGAP3-207ENST00000580898 CDC5LQ99459 802 aaKnown RBP17.43■□□□□ 0.38
PGAP3-207ENST00000580898 BEGAINQ9BUH8 593 aa17.43■□□□□ 0.38
PGAP3-207ENST00000580898 MRS2Q9HD23 443 aa17.43■□□□□ 0.38
PGAP3-207ENST00000580898 WBP1LQ9NX94 342 aa17.43■□□□□ 0.38
PGAP3-207ENST00000580898 POLLQ9UGP5 575 aa17.43■□□□□ 0.38
PGAP3-207ENST00000580898 PGAP2Q9UHJ9 254 aa17.43■□□□□ 0.38
PGAP3-207ENST00000580898 GGA1Q9UJY5 639 aa17.43■□□□□ 0.38
PGAP3-207ENST00000580898 TLL2Q9Y6L7 1015 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms