RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 F6X3S4 739 aa20.83■□□□□ 0.93
IFT20-210ENST00000580357 ALDH1L1O75891 902 aa20.83■□□□□ 0.93
IFT20-210ENST00000580357 PSMD1Q99460 953 aa20.83■□□□□ 0.93
IFT20-210ENST00000580357 SMC4Q9NTJ3 1288 aa20.83■□□□□ 0.93
IFT20-210ENST00000580357 VPS33BQ9H267 617 aa20.82■□□□□ 0.92
IFT20-210ENST00000580357 TNRC6CQ9HCJ0 1690 aaKnown RBP20.82■□□□□ 0.92
IFT20-210ENST00000580357 ZBED9Q6R2W3 1325 aa20.81■□□□□ 0.92
IFT20-210ENST00000580357 RPS8P62241 208 aaKnown RBP20.81■□□□□ 0.92
IFT20-210ENST00000580357 SLC4A10Q6U841 1118 aa20.81■□□□□ 0.92
IFT20-210ENST00000580357 SRCIN1Q9C0H9 1055 aa20.81■□□□□ 0.92
IFT20-210ENST00000580357 DPY19L2Q6NUT2 758 aa20.8■□□□□ 0.92
IFT20-210ENST00000580357 UBE3BQ7Z3V4 1068 aa20.8■□□□□ 0.92
IFT20-210ENST00000580357 SUPT20HQ8NEM7 779 aa20.8■□□□□ 0.92
IFT20-210ENST00000580357 JARID2Q92833 1246 aaPredicted RBP20.8■□□□□ 0.92
IFT20-210ENST00000580357 PLA2G12BQ9BX93 195 aa20.8■□□□□ 0.92
IFT20-210ENST00000580357 RARSP54136 660 aaKnown RBP20.79■□□□□ 0.92
IFT20-210ENST00000580357 KDM2BQ8NHM5 1336 aa20.78■□□□□ 0.92
IFT20-210ENST00000580357 FER1L6Q2WGJ9 1857 aa20.78■□□□□ 0.92
IFT20-210ENST00000580357 CTSWP56202 376 aa20.78■□□□□ 0.92
IFT20-210ENST00000580357 MPNDQ8N594 471 aa20.78■□□□□ 0.92
IFT20-210ENST00000580357 TTLL11Q8NHH1 800 aa20.78■□□□□ 0.92
IFT20-210ENST00000580357 ZNF526Q8TF50 670 aaPredicted RBP20.78■□□□□ 0.92
IFT20-210ENST00000580357 C9orf78Q9NZ63 289 aaPredicted RBP20.78■□□□□ 0.92
IFT20-210ENST00000580357 SBF1O95248 1867 aa20.77■□□□□ 0.92
IFT20-210ENST00000580357 PRELPP51888 382 aa20.77■□□□□ 0.92
IFT20-210ENST00000580357 CASP7P55210 303 aa20.77■□□□□ 0.92
IFT20-210ENST00000580357 OLFM4Q6UX06 510 aa20.77■□□□□ 0.92
IFT20-210ENST00000580357 ARHGAP45Q92619 1136 aa20.77■□□□□ 0.92
IFT20-210ENST00000580357 CDC5LQ99459 802 aaKnown RBP20.77■□□□□ 0.92
IFT20-210ENST00000580357 BCL2L13Q9BXK5 485 aa20.77■□□□□ 0.92
IFT20-210ENST00000580357 GRM8O00222 908 aa20.76■□□□□ 0.91
IFT20-210ENST00000580357 IPO8O15397 1037 aaKnown RBP20.76■□□□□ 0.91
IFT20-210ENST00000580357 HSPA6P17066 643 aa20.76■□□□□ 0.91
IFT20-210ENST00000580357 IARSP41252 1262 aaKnown RBP20.76■□□□□ 0.91
IFT20-210ENST00000580357 DPP8Q6V1X1 898 aaPredicted RBP20.76■□□□□ 0.91
IFT20-210ENST00000580357 ANKRD18AQ8IVF6 992 aa20.76■□□□□ 0.91
IFT20-210ENST00000580357 API5Q9BZZ5 524 aaKnown RBP20.76■□□□□ 0.91
IFT20-210ENST00000580357 DDX60Q8IY21 1712 aaKnown RBP20.75■□□□□ 0.91
IFT20-210ENST00000580357 CACNA1SQ13698 1873 aa20.75■□□□□ 0.91
IFT20-210ENST00000580357 GLTPD2A6NH11 291 aa20.75■□□□□ 0.91
IFT20-210ENST00000580357 CSF1RP07333 972 aa20.75■□□□□ 0.91
IFT20-210ENST00000580357 JDP2Q8WYK2 163 aa20.75■□□□□ 0.91
IFT20-210ENST00000580357 CELF1Q92879 486 aaKnown RBP20.75■□□□□ 0.91
IFT20-210ENST00000580357 RTFDC1Q9BY42 306 aaPredicted RBP20.75■□□□□ 0.91
IFT20-210ENST00000580357 ZNF277Q9NRM2 450 aaPredicted RBP20.75■□□□□ 0.91
IFT20-210ENST00000580357 NOB1Q9ULX3 412 aaKnown RBP20.75■□□□□ 0.91
IFT20-210ENST00000580357 KIF16BQ96L93 1317 aa20.75■□□□□ 0.91
IFT20-210ENST00000580357 SEC31BQ9NQW1 1179 aa20.74■□□□□ 0.91
IFT20-210ENST00000580357 LAMB2P55268 1798 aa20.74■□□□□ 0.91
IFT20-210ENST00000580357 RTL9Q8NET4 1388 aa20.73■□□□□ 0.91
IFT20-210ENST00000580357 CCT4P50991 539 aaKnown RBP20.73■□□□□ 0.91
IFT20-210ENST00000580357 BSDC1Q9NW68 430 aaPredicted RBP20.72■□□□□ 0.91
IFT20-210ENST00000580357 HDAC5Q9UQL6 1122 aa20.72■□□□□ 0.91
IFT20-210ENST00000580357 SNED1Q8TER0 1413 aa20.71■□□□□ 0.91
IFT20-210ENST00000580357 LARGE2Q8N3Y3 721 aa20.71■□□□□ 0.91
IFT20-210ENST00000580357 CCDC85AQ96PX6 553 aaPredicted RBP20.71■□□□□ 0.91
IFT20-210ENST00000580357 NSFL1CQ9UNZ2 370 aaKnown RBP20.71■□□□□ 0.91
IFT20-210ENST00000580357 UTYO14607 1347 aa20.71■□□□□ 0.91
IFT20-210ENST00000580357 IGHMBP2P38935 993 aaKnown RBP20.7■□□□□ 0.9
IFT20-210ENST00000580357 EYA3Q99504 573 aa20.7■□□□□ 0.9
IFT20-210ENST00000580357 GREM2Q9H772 168 aa20.7■□□□□ 0.9
IFT20-210ENST00000580357 PODXL2Q9NZ53 605 aa20.7■□□□□ 0.9
IFT20-210ENST00000580357 CCDC88AQ3V6T2 1871 aa20.7■□□□□ 0.9
IFT20-210ENST00000580357 ANKRD18BA2A2Z9 1011 aa20.69■□□□□ 0.9
IFT20-210ENST00000580357 FZD9O00144 591 aa20.69■□□□□ 0.9
IFT20-210ENST00000580357 ITGA6P23229 1130 aa20.69■□□□□ 0.9
IFT20-210ENST00000580357 FOXO4P98177 505 aa20.69■□□□□ 0.9
IFT20-210ENST00000580357 IFIT5Q13325 482 aaKnown RBP20.69■□□□□ 0.9
IFT20-210ENST00000580357 DICER1Q9UPY3 1922 aaKnown RBP20.68■□□□□ 0.9
IFT20-210ENST00000580357 PPIP5K2O43314 1243 aa20.68■□□□□ 0.9
IFT20-210ENST00000580357 VEGFAP15692 232 aaPredicted RBP20.68■□□□□ 0.9
IFT20-210ENST00000580357 EIF6P56537 245 aaKnown RBP20.68■□□□□ 0.9
IFT20-210ENST00000580357 NIM1KQ8IY84 436 aa20.68■□□□□ 0.9
IFT20-210ENST00000580357 MPHOSPH8Q99549 860 aa20.68■□□□□ 0.9
IFT20-210ENST00000580357 ANKIB1Q9P2G1 1089 aa20.68■□□□□ 0.9
IFT20-210ENST00000580357 C6orf229H3BNL8 230 aa20.67■□□□□ 0.9
IFT20-210ENST00000580357 GPSM2P81274 684 aa20.67■□□□□ 0.9
IFT20-210ENST00000580357 KIAA2012Q0VF49 1180 aa20.67■□□□□ 0.9
IFT20-210ENST00000580357 WASHC4Q2M389 1173 aa20.67■□□□□ 0.9
IFT20-210ENST00000580357 CCDC57Q2TAC2 916 aa20.67■□□□□ 0.9
IFT20-210ENST00000580357 LMBR1LQ6UX01 489 aa20.67■□□□□ 0.9
IFT20-210ENST00000580357 USP44Q9H0E7 712 aa20.67■□□□□ 0.9
IFT20-210ENST00000580357 RRAGCQ9HB90 399 aa20.67■□□□□ 0.9
IFT20-210ENST00000580357 BCAR3O75815 825 aa20.66■□□□□ 0.9
IFT20-210ENST00000580357 NBPF7P0C2Y1 421 aaPredicted RBP20.66■□□□□ 0.9
IFT20-210ENST00000580357 C16orf71Q8IYS4 520 aaPredicted RBP20.66■□□□□ 0.9
IFT20-210ENST00000580357 GGA1Q9UJY5 639 aa20.66■□□□□ 0.9
IFT20-210ENST00000580357 KIF3CO14782 793 aa20.65■□□□□ 0.9
IFT20-210ENST00000580357 ATP2B4P23634 1241 aa20.65■□□□□ 0.9
IFT20-210ENST00000580357 AOC3Q16853 763 aa20.65■□□□□ 0.9
IFT20-210ENST00000580357 ZC3H12CQ9C0D7 883 aaKnown RBP20.65■□□□□ 0.9
IFT20-210ENST00000580357 ANKRD2Q9GZV1 360 aa20.65■□□□□ 0.9
IFT20-210ENST00000580357 NMRK2Q9NPI5 230 aa20.65■□□□□ 0.9
IFT20-210ENST00000580357 ZNRF3Q9ULT6 936 aa20.65■□□□□ 0.9
IFT20-210ENST00000580357 MINPP1Q9UNW1 487 aa20.65■□□□□ 0.9
IFT20-210ENST00000580357 CHMP3Q9Y3E7 222 aa20.65■□□□□ 0.9
IFT20-210ENST00000580357 MYH3P11055 1940 aa20.65■□□□□ 0.9
IFT20-210ENST00000580357 XDHP47989 1333 aa20.64■□□□□ 0.89
IFT20-210ENST00000580357 FAM161AQ3B820 660 aa20.64■□□□□ 0.89
IFT20-210ENST00000580357 INTS3Q68E01 1043 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms