RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 SNED1Q8TER0 1413 aa29.37■■■□□ 2.29
LIMD2-204ENST00000578297 FKBP4Q02790 459 aaKnown RBP eCLIP29.37■■■□□ 2.29
LIMD2-204ENST00000578297 BCL2L13Q9BXK5 485 aa29.37■■■□□ 2.29
LIMD2-204ENST00000578297 ATP6V0A2Q9Y487 856 aa29.37■■■□□ 2.29
LIMD2-204ENST00000578297 SMC4Q9NTJ3 1288 aa29.36■■■□□ 2.29
LIMD2-204ENST00000578297 ZC3H4Q9UPT8 1303 aaKnown RBP29.36■■■□□ 2.29
LIMD2-204ENST00000578297 UBE3BQ7Z3V4 1068 aa29.35■■■□□ 2.29
LIMD2-204ENST00000578297 CASP7P55210 303 aa29.34■■■□□ 2.29
LIMD2-204ENST00000578297 CCDC152Q4G0S7 254 aa29.34■■■□□ 2.29
LIMD2-204ENST00000578297 SLC4A10Q6U841 1118 aa29.34■■■□□ 2.29
LIMD2-204ENST00000578297 TMC4Q7Z404 712 aa29.34■■■□□ 2.29
LIMD2-204ENST00000578297 PSMD1Q99460 953 aa29.34■■■□□ 2.29
LIMD2-204ENST00000578297 TMX4Q9H1E5 349 aaPredicted RBP29.34■■■□□ 2.29
LIMD2-204ENST00000578297 TAF1P21675 1872 aa29.34■■■□□ 2.29
LIMD2-204ENST00000578297 BRPF1P55201 1214 aaPredicted RBP29.33■■■□□ 2.29
LIMD2-204ENST00000578297 SP8Q8IXZ3 490 aa29.33■■■□□ 2.29
LIMD2-204ENST00000578297 DICER1Q9UPY3 1922 aaKnown RBP29.32■■■□□ 2.28
LIMD2-204ENST00000578297 ALDH1L1O75891 902 aa29.32■■■□□ 2.28
LIMD2-204ENST00000578297 RARSP54136 660 aaKnown RBP29.32■■■□□ 2.28
LIMD2-204ENST00000578297 CTSWP56202 376 aa29.32■■■□□ 2.28
LIMD2-204ENST00000578297 CELF1Q92879 486 aaKnown RBP29.32■■■□□ 2.28
LIMD2-204ENST00000578297 SLC51AQ86UW1 340 aa29.31■■■□□ 2.28
LIMD2-204ENST00000578297 PLA2G12BQ9BX93 195 aa29.31■■■□□ 2.28
LIMD2-204ENST00000578297 SRCIN1Q9C0H9 1055 aa29.31■■■□□ 2.28
LIMD2-204ENST00000578297 TTLL11Q8NHH1 800 aa29.3■■■□□ 2.28
LIMD2-204ENST00000578297 ZNF526Q8TF50 670 aaPredicted RBP29.3■■■□□ 2.28
LIMD2-204ENST00000578297 GPBP1L1Q9HC44 474 aaPredicted RBP29.3■■■□□ 2.28
LIMD2-204ENST00000578297 MYH3P11055 1940 aa29.3■■■□□ 2.28
LIMD2-204ENST00000578297 RPS8P62241 208 aaKnown RBP29.29■■■□□ 2.28
LIMD2-204ENST00000578297 SEC31BQ9NQW1 1179 aa29.29■■■□□ 2.28
LIMD2-204ENST00000578297 ZNF277Q9NRM2 450 aaPredicted RBP29.29■■■□□ 2.28
LIMD2-204ENST00000578297 TIAM2Q8IVF5 1701 aa29.28■■■□□ 2.28
LIMD2-204ENST00000578297 GRM8O00222 908 aa29.27■■■□□ 2.28
LIMD2-204ENST00000578297 CCDC85AQ96PX6 553 aaPredicted RBP29.27■■■□□ 2.28
LIMD2-204ENST00000578297 COL4A1P02462 1669 aa29.27■■■□□ 2.28
LIMD2-204ENST00000578297 IARSP41252 1262 aaKnown RBP29.26■■■□□ 2.27
LIMD2-204ENST00000578297 NOB1Q9ULX3 412 aaKnown RBP29.26■■■□□ 2.27
LIMD2-204ENST00000578297 RTL9Q8NET4 1388 aa29.26■■■□□ 2.27
LIMD2-204ENST00000578297 LRRC37AA6NMS7 1700 aa29.25■■■□□ 2.27
LIMD2-204ENST00000578297 RTFDC1Q9BY42 306 aaPredicted RBP29.25■■■□□ 2.27
LIMD2-204ENST00000578297 C9orf78Q9NZ63 289 aaPredicted RBP29.25■■■□□ 2.27
LIMD2-204ENST00000578297 CSF1RP07333 972 aa29.24■■■□□ 2.27
LIMD2-204ENST00000578297 DPP8Q6V1X1 898 aaPredicted RBP29.24■■■□□ 2.27
LIMD2-204ENST00000578297 MPNDQ8N594 471 aa29.24■■■□□ 2.27
LIMD2-204ENST00000578297 GREM2Q9H772 168 aa29.24■■■□□ 2.27
LIMD2-204ENST00000578297 KDM2BQ8NHM5 1336 aa29.23■■■□□ 2.27
LIMD2-204ENST00000578297 SUPT20HQ8NEM7 779 aa29.23■■■□□ 2.27
LIMD2-204ENST00000578297 VPS33BQ9H267 617 aa29.23■■■□□ 2.27
LIMD2-204ENST00000578297 KIF16BQ96L93 1317 aa29.22■■■□□ 2.27
LIMD2-204ENST00000578297 GLTPD2A6NH11 291 aa29.22■■■□□ 2.27
LIMD2-204ENST00000578297 ANKRD18AQ8IVF6 992 aa29.22■■■□□ 2.27
LIMD2-204ENST00000578297 CDC5LQ99459 802 aaKnown RBP29.22■■■□□ 2.27
LIMD2-204ENST00000578297 UTYO14607 1347 aa29.21■■■□□ 2.27
LIMD2-204ENST00000578297 FOXO4P98177 505 aa29.21■■■□□ 2.27
LIMD2-204ENST00000578297 ARHGAP45Q92619 1136 aa29.21■■■□□ 2.27
LIMD2-204ENST00000578297 API5Q9BZZ5 524 aaKnown RBP29.21■■■□□ 2.27
LIMD2-204ENST00000578297 DPY19L2Q6NUT2 758 aa29.2■■■□□ 2.26
LIMD2-204ENST00000578297 JDP2Q8WYK2 163 aa29.18■■■□□ 2.26
LIMD2-204ENST00000578297 NSFL1CQ9UNZ2 370 aaKnown RBP29.18■■■□□ 2.26
LIMD2-204ENST00000578297 FZD9O00144 591 aa29.17■■■□□ 2.26
LIMD2-204ENST00000578297 BCAR3O75815 825 aa29.17■■■□□ 2.26
LIMD2-204ENST00000578297 NBPF7P0C2Y1 421 aaPredicted RBP29.17■■■□□ 2.26
LIMD2-204ENST00000578297 ITGA6P23229 1130 aa29.17■■■□□ 2.26
LIMD2-204ENST00000578297 CCT4P50991 539 aaKnown RBP29.17■■■□□ 2.26
LIMD2-204ENST00000578297 GPSM2P81274 684 aa29.17■■■□□ 2.26
LIMD2-204ENST00000578297 FAM161AQ3B820 660 aa29.17■■■□□ 2.26
LIMD2-204ENST00000578297 LARGE2Q8N3Y3 721 aa29.17■■■□□ 2.26
LIMD2-204ENST00000578297 NMRK2Q9NPI5 230 aa29.17■■■□□ 2.26
LIMD2-204ENST00000578297 PPIP5K2O43314 1243 aa29.16■■■□□ 2.26
LIMD2-204ENST00000578297 BSDC1Q9NW68 430 aaPredicted RBP29.16■■■□□ 2.26
LIMD2-204ENST00000578297 PODXL2Q9NZ53 605 aa29.16■■■□□ 2.26
LIMD2-204ENST00000578297 DUOX1Q9NRD9 1551 aa29.16■■■□□ 2.26
LIMD2-204ENST00000578297 KIF3CO14782 793 aa29.15■■■□□ 2.26
LIMD2-204ENST00000578297 IPO8O15397 1037 aaKnown RBP29.15■■■□□ 2.26
LIMD2-204ENST00000578297 AOC3Q16853 763 aa29.15■■■□□ 2.26
LIMD2-204ENST00000578297 EPHA10Q5JZY3 1008 aa29.15■■■□□ 2.26
LIMD2-204ENST00000578297 USP44Q9H0E7 712 aa29.15■■■□□ 2.26
LIMD2-204ENST00000578297 COL4A5P29400 1685 aa29.15■■■□□ 2.26
LIMD2-204ENST00000578297 LTBP1Q14766 1721 aa29.14■■■□□ 2.26
LIMD2-204ENST00000578297 KIAA2012Q0VF49 1180 aa29.14■■■□□ 2.26
LIMD2-204ENST00000578297 LMBR1LQ6UX01 489 aa29.14■■■□□ 2.26
LIMD2-204ENST00000578297 SUCLG2Q96I99 432 aa29.14■■■□□ 2.26
LIMD2-204ENST00000578297 IGHMBP2P38935 993 aaKnown RBP29.13■■■□□ 2.25
LIMD2-204ENST00000578297 KAZALD1Q96I82 304 aa29.13■■■□□ 2.25
LIMD2-204ENST00000578297 RRAGCQ9HB90 399 aa29.13■■■□□ 2.25
LIMD2-204ENST00000578297 POLLQ9UGP5 575 aa29.13■■■□□ 2.25
LIMD2-204ENST00000578297 ANKRD18BA2A2Z9 1011 aa29.12■■■□□ 2.25
LIMD2-204ENST00000578297 IFIT5Q13325 482 aaKnown RBP29.12■■■□□ 2.25
LIMD2-204ENST00000578297 NIM1KQ8IY84 436 aa29.12■■■□□ 2.25
LIMD2-204ENST00000578297 ANKIB1Q9P2G1 1089 aa29.12■■■□□ 2.25
LIMD2-204ENST00000578297 DDNO94850 711 aaPredicted RBP29.11■■■□□ 2.25
LIMD2-204ENST00000578297 TBC1D16Q8TBP0 767 aa29.11■■■□□ 2.25
LIMD2-204ENST00000578297 MINPP1Q9UNW1 487 aa29.11■■■□□ 2.25
LIMD2-204ENST00000578297 CHMP3Q9Y3E7 222 aa29.11■■■□□ 2.25
LIMD2-204ENST00000578297 ZNF541Q9H0D2 1346 aa29.11■■■□□ 2.25
LIMD2-204ENST00000578297 WDR90Q96KV7 1748 aa29.11■■■□□ 2.25
LIMD2-204ENST00000578297 C6orf229H3BNL8 230 aa29.1■■■□□ 2.25
LIMD2-204ENST00000578297 WASHC4Q2M389 1173 aa29.1■■■□□ 2.25
LIMD2-204ENST00000578297 ATF7IPQ6VMQ6 1270 aa29.1■■■□□ 2.25
LIMD2-204ENST00000578297 FRAT1Q92837 279 aaPredicted RBP29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms