RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, human

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
THRA-208	ENST00000578218	RASSF10	A6NK89	507 aa		32.48	■■■□□ 2.79
THRA-208	ENST00000578218	ZNRF3	Q9ULT6	936 aa		32.48	■■■□□ 2.79
THRA-208	ENST00000578218	ADAMTS8	Q9UP79	889 aa		32.48	■■■□□ 2.79
THRA-208	ENST00000578218	DEFB115	Q30KQ5	88 aa		32.47	■■■□□ 2.79
THRA-208	ENST00000578218	PLBD2	Q8NHP8	589 aa		32.47	■■■□□ 2.79
THRA-208	ENST00000578218	DUOX1	Q9NRD9	1551 aa		32.47	■■■□□ 2.79
THRA-208	ENST00000578218	DBF4	Q9UBU7	674 aa	Predicted RBP	32.47	■■■□□ 2.79
THRA-208	ENST00000578218	GPRC5D	Q9NZD1	345 aa		32.46	■■■□□ 2.79
THRA-208	ENST00000578218	THSD7B	Q9C0I4	1608 aa		32.45	■■■□□ 2.79
THRA-208	ENST00000578218	ADARB2	Q9NS39	739 aa	Known RBP	32.45	■■■□□ 2.79
THRA-208	ENST00000578218	CXCL9	Q07325	125 aa		32.44	■■■□□ 2.78
THRA-208	ENST00000578218	KIAA2012	Q0VF49	1180 aa		32.44	■■■□□ 2.78
THRA-208	ENST00000578218	ANKRD13D	Q6ZTN6	518 aa		32.44	■■■□□ 2.78
THRA-208	ENST00000578218	TMC4	Q7Z404	712 aa		32.44	■■■□□ 2.78
THRA-208	ENST00000578218	CFAP44	Q96MT7	982 aa		32.44	■■■□□ 2.78
THRA-208	ENST00000578218	CTCF	P49711	727 aa	Predicted RBP	32.43	■■■□□ 2.78
THRA-208	ENST00000578218	GMPS	P49915	693 aa	Predicted RBP	32.42	■■■□□ 2.78
THRA-208	ENST00000578218	DUSP27	Q5VZP5	1158 aa		32.42	■■■□□ 2.78
THRA-208	ENST00000578218	CIAPIN1	Q6FI81	312 aa		32.42	■■■□□ 2.78
THRA-208	ENST00000578218	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.42	■■■□□ 2.78
THRA-208	ENST00000578218	HYPK	Q9NX55	129 aa		32.42	■■■□□ 2.78
THRA-208	ENST00000578218	ATP5J2-PTCD1	G3V325	749 aa		32.41	■■■□□ 2.78
THRA-208	ENST00000578218	ISCA1	Q9BUE6	129 aa		32.41	■■■□□ 2.78
THRA-208	ENST00000578218	BCL2L13	Q9BXK5	485 aa		32.41	■■■□□ 2.78
THRA-208	ENST00000578218	MBIP	Q9NS73	344 aa		32.41	■■■□□ 2.78
THRA-208	ENST00000578218	CDHR2	Q9BYE9	1310 aa		32.41	■■■□□ 2.78
THRA-208	ENST00000578218	WDR33	Q9C0J8	1336 aa	Known RBP	32.41	■■■□□ 2.78
THRA-208	ENST00000578218	FMR1	Q06787	632 aa	Known RBP eCLIP	32.4	■■■□□ 2.78
THRA-208	ENST00000578218	FAM89A	Q96GI7	184 aa		32.4	■■■□□ 2.78
THRA-208	ENST00000578218	TRAF5	O00463	557 aa		32.39	■■■□□ 2.78
THRA-208	ENST00000578218	RAD17	O75943	681 aa		32.39	■■■□□ 2.78
THRA-208	ENST00000578218	PRDM10	Q9NQV6	1147 aa		32.39	■■■□□ 2.78
THRA-208	ENST00000578218	TNIP1	Q15025	636 aa		32.38	■■■□□ 2.77
THRA-208	ENST00000578218	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.38	■■■□□ 2.77
THRA-208	ENST00000578218	WBP1L	Q9NX94	342 aa		32.38	■■■□□ 2.77
THRA-208	ENST00000578218	RTL5	Q5HYW3	569 aa	Predicted RBP	32.37	■■■□□ 2.77
THRA-208	ENST00000578218	GOLGA2	Q08379	1002 aa		32.36	■■■□□ 2.77
THRA-208	ENST00000578218	GRM1	Q13255	1194 aa		32.36	■■■□□ 2.77
THRA-208	ENST00000578218	COL4A1	P02462	1669 aa		32.36	■■■□□ 2.77
THRA-208	ENST00000578218	CELF1	Q92879	486 aa	Known RBP	32.35	■■■□□ 2.77
THRA-208	ENST00000578218	ECE1	P42892	770 aa		32.34	■■■□□ 2.77
THRA-208	ENST00000578218	MAP2K1	Q02750	393 aa	Predicted RBP	32.34	■■■□□ 2.77
THRA-208	ENST00000578218	CALD1	Q05682	793 aa	Known RBP	32.34	■■■□□ 2.77
THRA-208	ENST00000578218	SF3B3	Q15393	1217 aa	Known RBP	32.34	■■■□□ 2.77
THRA-208	ENST00000578218	RIC3	Q7Z5B4	369 aa		32.33	■■■□□ 2.77
THRA-208	ENST00000578218	CAPNS2	Q96L46	248 aa		32.33	■■■□□ 2.77
THRA-208	ENST00000578218	IFT57	Q9NWB7	429 aa		32.33	■■■□□ 2.77
THRA-208	ENST00000578218	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.33	■■■□□ 2.77
THRA-208	ENST00000578218	YDJC	A8MPS7	323 aa		32.32	■■■□□ 2.76
THRA-208	ENST00000578218	IRS4	O14654	1257 aa	Predicted RBP	32.32	■■■□□ 2.76
THRA-208	ENST00000578218	APAF1	O14727	1248 aa		32.32	■■■□□ 2.76
THRA-208	ENST00000578218	LBX1	P52954	281 aa		32.32	■■■□□ 2.76
THRA-208	ENST00000578218	GNAI1	P63096	354 aa		32.31	■■■□□ 2.76
THRA-208	ENST00000578218	WASHC4	Q2M389	1173 aa		32.31	■■■□□ 2.76
THRA-208	ENST00000578218	CST9	Q5W186	159 aa		32.31	■■■□□ 2.76
THRA-208	ENST00000578218	CYP4F22	Q6NT55	531 aa		32.31	■■■□□ 2.76
THRA-208	ENST00000578218	TLL2	Q9Y6L7	1015 aa		32.31	■■■□□ 2.76
THRA-208	ENST00000578218	ZNF853	P0CG23	659 aa		32.3	■■■□□ 2.76
THRA-208	ENST00000578218	GLIS2	Q9BZE0	524 aa	Predicted RBP	32.3	■■■□□ 2.76
THRA-208	ENST00000578218	C6orf229	H3BNL8	230 aa		32.29	■■■□□ 2.76
THRA-208	ENST00000578218	CELF2	O95319	508 aa	Known RBP	32.29	■■■□□ 2.76
THRA-208	ENST00000578218	HSPA8	P11142	646 aa	Known RBP	32.29	■■■□□ 2.76
THRA-208	ENST00000578218	TRPM4	Q8TD43	1214 aa		32.29	■■■□□ 2.76
THRA-208	ENST00000578218	DBNDD1	Q9H9R9	158 aa		32.29	■■■□□ 2.76
THRA-208	ENST00000578218	ELL2	O00472	640 aa	Predicted RBP	32.28	■■■□□ 2.76
THRA-208	ENST00000578218	TRIM28	Q13263	835 aa	Known RBP	32.28	■■■□□ 2.76
THRA-208	ENST00000578218	MICALL2	Q8IY33	904 aa		32.28	■■■□□ 2.76
THRA-208	ENST00000578218	EYA3	Q99504	573 aa		32.28	■■■□□ 2.76
THRA-208	ENST00000578218	CNOT7	Q9UIV1	285 aa	Known RBP	32.28	■■■□□ 2.76
THRA-208	ENST00000578218		H7C1D1	291 aa		32.27	■■■□□ 2.76
THRA-208	ENST00000578218	RIMBP2	O15034	1052 aa		32.27	■■■□□ 2.76
THRA-208	ENST00000578218	GPSM2	P81274	684 aa		32.27	■■■□□ 2.76
THRA-208	ENST00000578218	MYD88	Q99836	296 aa		32.27	■■■□□ 2.76
THRA-208	ENST00000578218	BEGAIN	Q9BUH8	593 aa		32.27	■■■□□ 2.76
THRA-208	ENST00000578218	PHAX	Q9H814	394 aa	Known RBP	32.27	■■■□□ 2.76
THRA-208	ENST00000578218	ZNF408	Q9H9D4	720 aa		32.27	■■■□□ 2.76
THRA-208	ENST00000578218	HSP90B1	P14625	803 aa	Known RBP	32.26	■■■□□ 2.75
THRA-208	ENST00000578218	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.26	■■■□□ 2.75
THRA-208	ENST00000578218	ZC3H15	Q8WU90	426 aa	Known RBP	32.26	■■■□□ 2.75
THRA-208	ENST00000578218	SHTN1	A0MZ66	631 aa		32.25	■■■□□ 2.75
THRA-208	ENST00000578218	GPR101	Q96P66	508 aa	Predicted RBP	32.25	■■■□□ 2.75
THRA-208	ENST00000578218	ZBTB12	Q9Y330	459 aa	Predicted RBP	32.25	■■■□□ 2.75
THRA-208	ENST00000578218	PSMD14	O00487	310 aa		32.24	■■■□□ 2.75
THRA-208	ENST00000578218	HIRA	P54198	1017 aa	Predicted RBP	32.24	■■■□□ 2.75
THRA-208	ENST00000578218	POLL	Q9UGP5	575 aa		32.24	■■■□□ 2.75
THRA-208	ENST00000578218	PGAP2	Q9UHJ9	254 aa		32.24	■■■□□ 2.75
THRA-208	ENST00000578218	ECE2	O60344	883 aa		32.23	■■■□□ 2.75
THRA-208	ENST00000578218	RPS8	P62241	208 aa	Known RBP	32.22	■■■□□ 2.75
THRA-208	ENST00000578218	CDC37L1	Q7L3B6	337 aa		32.22	■■■□□ 2.75
THRA-208	ENST00000578218	SAPCD2	Q86UD0	394 aa		32.22	■■■□□ 2.75
THRA-208	ENST00000578218	DDX58	O95786	925 aa	Known RBP	32.21	■■■□□ 2.75
THRA-208	ENST00000578218	DPF2	Q92785	391 aa		32.21	■■■□□ 2.75
THRA-208	ENST00000578218	SCN9A	Q15858	1988 aa		32.2	■■■□□ 2.75
THRA-208	ENST00000578218	DOK7	Q18PE1	504 aa		32.2	■■■□□ 2.75
THRA-208	ENST00000578218	CCDC152	Q4G0S7	254 aa		32.2	■■■□□ 2.75
THRA-208	ENST00000578218	CCDC191	Q8NCU4	936 aa		32.2	■■■□□ 2.75
THRA-208	ENST00000578218	TBC1D16	Q8TBP0	767 aa		32.2	■■■□□ 2.75
THRA-208	ENST00000578218	SEC31B	Q9NQW1	1179 aa		32.2	■■■□□ 2.75
THRA-208	ENST00000578218	CWC25	Q9NXE8	425 aa	Predicted RBP	32.2	■■■□□ 2.75
THRA-208	ENST00000578218	SPEF2	Q9C093	1822 aa		32.2	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 12 ms