RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 PI4KAP2A4QPH2 592 aa16■□□□□ 0.15
CSNK1D-206ENST00000577578 IQCA1LA6NCM1 817 aa16■□□□□ 0.15
CSNK1D-206ENST00000577578 TCERG1O14776 1098 aaKnown RBP16■□□□□ 0.15
CSNK1D-206ENST00000577578 PCCAP05165 728 aaPredicted RBP16■□□□□ 0.15
CSNK1D-206ENST00000577578 GPC2Q8N158 579 aa16■□□□□ 0.15
CSNK1D-206ENST00000577578 PI4KAP1Q8N8J0 262 aa16■□□□□ 0.15
CSNK1D-206ENST00000577578 JDP2Q8WYK2 163 aa16■□□□□ 0.15
CSNK1D-206ENST00000577578 ZNF428Q96B54 188 aa16■□□□□ 0.15
CSNK1D-206ENST00000577578 TMX4Q9H1E5 349 aaPredicted RBP16■□□□□ 0.15
CSNK1D-206ENST00000577578 SPINK5Q9NQ38 1064 aaPredicted RBP16■□□□□ 0.15
CSNK1D-206ENST00000577578 CWC25Q9NXE8 425 aaPredicted RBP16■□□□□ 0.15
CSNK1D-206ENST00000577578 MAP3K2Q9Y2U5 619 aa16■□□□□ 0.15
CSNK1D-206ENST00000577578 ADAMTSL1Q8N6G6 1762 aa16■□□□□ 0.15
CSNK1D-206ENST00000577578 MYH3P11055 1940 aa16■□□□□ 0.15
CSNK1D-206ENST00000577578 VAMP4O75379 141 aa15.99■□□□□ 0.15
CSNK1D-206ENST00000577578 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
CSNK1D-206ENST00000577578 HSP90B1P14625 803 aaKnown RBP15.99■□□□□ 0.15
CSNK1D-206ENST00000577578 G2E3Q7L622 706 aa15.99■□□□□ 0.15
CSNK1D-206ENST00000577578 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
CSNK1D-206ENST00000577578 IGKV5-2P06315 115 aa15.98■□□□□ 0.15
CSNK1D-206ENST00000577578 RTL5Q5HYW3 569 aaPredicted RBP15.98■□□□□ 0.15
CSNK1D-206ENST00000577578 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
CSNK1D-206ENST00000577578 MPNDQ8N594 471 aa15.98■□□□□ 0.15
CSNK1D-206ENST00000577578 DNAJC5GQ8N7S2 189 aa15.98■□□□□ 0.15
CSNK1D-206ENST00000577578 SUPT20HQ8NEM7 779 aa15.98■□□□□ 0.15
CSNK1D-206ENST00000577578 CELF1Q92879 486 aaKnown RBP15.98■□□□□ 0.15
CSNK1D-206ENST00000577578 TAF1DQ9H5J8 278 aaPredicted RBP15.98■□□□□ 0.15
CSNK1D-206ENST00000577578 PCNTO95613 3336 aa15.97■□□□□ 0.15
CSNK1D-206ENST00000577578 CDHR2Q9BYE9 1310 aa15.97■□□□□ 0.15
CSNK1D-206ENST00000577578 EXOSC9Q06265 439 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-206ENST00000577578 FLIIQ13045 1269 aa15.97■□□□□ 0.15
CSNK1D-206ENST00000577578 DPP8Q6V1X1 898 aaPredicted RBP15.97■□□□□ 0.15
CSNK1D-206ENST00000577578 MYH16Q9H6N6 1097 aa15.97■□□□□ 0.15
CSNK1D-206ENST00000577578 PPIP5K2O43314 1243 aa15.96■□□□□ 0.15
CSNK1D-206ENST00000577578 KIAA2012Q0VF49 1180 aa15.96■□□□□ 0.15
CSNK1D-206ENST00000577578 AOC3Q16853 763 aa15.96■□□□□ 0.15
CSNK1D-206ENST00000577578 NEURL1BA8MQ27 555 aa15.95■□□□□ 0.14
CSNK1D-206ENST00000577578 PDE8AO60658 829 aa15.95■□□□□ 0.14
CSNK1D-206ENST00000577578 POTEIP0CG38 1075 aa15.95■□□□□ 0.14
CSNK1D-206ENST00000577578 POTEJP0CG39 1038 aa15.95■□□□□ 0.14
CSNK1D-206ENST00000577578 EIF6P56537 245 aaKnown RBP15.95■□□□□ 0.14
CSNK1D-206ENST00000577578 NEXNQ0ZGT2 675 aa15.95■□□□□ 0.14
CSNK1D-206ENST00000577578 CHADLQ6NUI6 762 aa15.95■□□□□ 0.14
CSNK1D-206ENST00000577578 NIM1KQ8IY84 436 aa15.95■□□□□ 0.14
CSNK1D-206ENST00000577578 HACL1Q9UJ83 578 aa15.95■□□□□ 0.14
CSNK1D-206ENST00000577578 RPS8P62241 208 aaKnown RBP15.94■□□□□ 0.14
CSNK1D-206ENST00000577578 LDHDQ86WU2 507 aa15.94■□□□□ 0.14
CSNK1D-206ENST00000577578 ZNRF3Q9ULT6 936 aa15.94■□□□□ 0.14
CSNK1D-206ENST00000577578 RTL9Q8NET4 1388 aa15.93■□□□□ 0.14
CSNK1D-206ENST00000577578 EPHX2P34913 555 aa15.93■□□□□ 0.14
CSNK1D-206ENST00000577578 SCNN1DP51172 638 aa15.93■□□□□ 0.14
CSNK1D-206ENST00000577578 CWF19L2Q2TBE0 894 aaKnown RBP15.93■□□□□ 0.14
CSNK1D-206ENST00000577578 CCDC152Q4G0S7 254 aa15.93■□□□□ 0.14
CSNK1D-206ENST00000577578 SEC31BQ9NQW1 1179 aa15.93■□□□□ 0.14
CSNK1D-206ENST00000577578 H7C1W4 665 aa15.92■□□□□ 0.14
CSNK1D-206ENST00000577578 FKBP5Q13451 457 aaPredicted RBP15.92■□□□□ 0.14
CSNK1D-206ENST00000577578 PNMA8AQ86V59 439 aaPredicted RBP15.92■□□□□ 0.14
CSNK1D-206ENST00000577578 LINS1Q8NG48 757 aa15.92■□□□□ 0.14
CSNK1D-206ENST00000577578 DNAAF4Q8WXU2 420 aa15.92■□□□□ 0.14
CSNK1D-206ENST00000577578 JARID2Q92833 1246 aaPredicted RBP15.92■□□□□ 0.14
CSNK1D-206ENST00000577578 PODXL2Q9NZ53 605 aa15.92■□□□□ 0.14
CSNK1D-206ENST00000577578 CTSWP56202 376 aa15.91■□□□□ 0.14
CSNK1D-206ENST00000577578 GPSM2P81274 684 aa15.91■□□□□ 0.14
CSNK1D-206ENST00000577578 HTRA3P83110 453 aa15.91■□□□□ 0.14
CSNK1D-206ENST00000577578 CXCL9Q07325 125 aa15.91■□□□□ 0.14
CSNK1D-206ENST00000577578 GCKRQ14397 625 aa15.91■□□□□ 0.14
CSNK1D-206ENST00000577578 NSFL1CQ9UNZ2 370 aaKnown RBP15.91■□□□□ 0.14
CSNK1D-206ENST00000577578 GJA3Q9Y6H8 435 aa15.91■□□□□ 0.14
CSNK1D-206ENST00000577578 PASKQ96RG2 1323 aa15.91■□□□□ 0.14
CSNK1D-206ENST00000577578 CCER2I3L3R5 266 aa15.9■□□□□ 0.14
CSNK1D-206ENST00000577578 CASP7P55210 303 aa15.9■□□□□ 0.14
CSNK1D-206ENST00000577578 TTLL11Q8NHH1 800 aa15.9■□□□□ 0.14
CSNK1D-206ENST00000577578 KLRG1Q96E93 195 aa15.9■□□□□ 0.14
CSNK1D-206ENST00000577578 PLA2G12BQ9BX93 195 aa15.9■□□□□ 0.14
CSNK1D-206ENST00000577578 POLLQ9UGP5 575 aa15.9■□□□□ 0.14
CSNK1D-206ENST00000577578 SPEF2Q9C093 1822 aa15.89■□□□□ 0.13
CSNK1D-206ENST00000577578 YDJCA8MPS7 323 aa15.89■□□□□ 0.13
CSNK1D-206ENST00000577578 ITGBL1O95965 494 aaPredicted RBP15.89■□□□□ 0.13
CSNK1D-206ENST00000577578 WASHC4Q2M389 1173 aa15.89■□□□□ 0.13
CSNK1D-206ENST00000577578 UBE3BQ7Z3V4 1068 aa15.89■□□□□ 0.13
CSNK1D-206ENST00000577578 TBC1D16Q8TBP0 767 aa15.89■□□□□ 0.13
CSNK1D-206ENST00000577578 SCN9AQ15858 1988 aa15.88■□□□□ 0.13
CSNK1D-206ENST00000577578 LMOD1P29536 600 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-206ENST00000577578 EPS15P42566 896 aa15.88■□□□□ 0.13
CSNK1D-206ENST00000577578 EAPPQ56P03 285 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-206ENST00000577578 CIAPIN1Q6FI81 312 aa15.88■□□□□ 0.13
CSNK1D-206ENST00000577578 JMYQ8N9B5 988 aa15.88■□□□□ 0.13
CSNK1D-206ENST00000577578 GPRC5DQ9NZD1 345 aa15.88■□□□□ 0.13
CSNK1D-206ENST00000577578 PSME4Q14997 1843 aa15.88■□□□□ 0.13
CSNK1D-206ENST00000577578 E9PSI1 815 aa15.87■□□□□ 0.13
CSNK1D-206ENST00000577578 BEND3Q5T5X7 828 aa15.87■□□□□ 0.13
CSNK1D-206ENST00000577578 USP50Q70EL3 339 aaPredicted RBP15.87■□□□□ 0.13
CSNK1D-206ENST00000577578 ANKRD18AQ8IVF6 992 aa15.87■□□□□ 0.13
CSNK1D-206ENST00000577578 CCDC85AQ96PX6 553 aaPredicted RBP15.87■□□□□ 0.13
CSNK1D-206ENST00000577578 CDC5LQ99459 802 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-206ENST00000577578 GREM2Q9H772 168 aa15.87■□□□□ 0.13
CSNK1D-206ENST00000577578 C6orf229H3BNL8 230 aa15.86■□□□□ 0.13
CSNK1D-206ENST00000577578 CSF1RP07333 972 aa15.86■□□□□ 0.13
CSNK1D-206ENST00000577578 TNIP1Q15025 636 aa15.86■□□□□ 0.13
CSNK1D-206ENST00000577578 EYA3Q99504 573 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms