RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 COL4A1P02462 1669 aa16.7■□□□□ 0.26
ATP2A3-211ENST00000572176 TMEM88BA6NKF7 163 aa16.7■□□□□ 0.26
ATP2A3-211ENST00000572176 ATP5J2-PTCD1G3V325 749 aa16.7■□□□□ 0.26
ATP2A3-211ENST00000572176 COL13A1Q5TAT6 717 aaPredicted RBP16.7■□□□□ 0.26
ATP2A3-211ENST00000572176 MAP1SQ66K74 1059 aaPredicted RBP16.7■□□□□ 0.26
ATP2A3-211ENST00000572176 DPP8Q6V1X1 898 aaPredicted RBP16.7■□□□□ 0.26
ATP2A3-211ENST00000572176 CNTROBQ8N137 903 aa16.7■□□□□ 0.26
ATP2A3-211ENST00000572176 ZNF428Q96B54 188 aa16.7■□□□□ 0.26
ATP2A3-211ENST00000572176 KIAA2012Q0VF49 1180 aa16.69■□□□□ 0.26
ATP2A3-211ENST00000572176 TRIM28Q13263 835 aaKnown RBP16.69■□□□□ 0.26
ATP2A3-211ENST00000572176 TMC4Q7Z404 712 aa16.69■□□□□ 0.26
ATP2A3-211ENST00000572176 MPNDQ8N594 471 aa16.69■□□□□ 0.26
ATP2A3-211ENST00000572176 EPS15P42566 896 aa16.68■□□□□ 0.26
ATP2A3-211ENST00000572176 SF3B3Q15393 1217 aaKnown RBP16.68■□□□□ 0.26
ATP2A3-211ENST00000572176 FAM89AQ96GI7 184 aa16.68■□□□□ 0.26
ATP2A3-211ENST00000572176 ZNRF3Q9ULT6 936 aa16.68■□□□□ 0.26
ATP2A3-211ENST00000572176 CXCL9Q07325 125 aa16.67■□□□□ 0.26
ATP2A3-211ENST00000572176 GOLGA2Q08379 1002 aa16.67■□□□□ 0.26
ATP2A3-211ENST00000572176 USP50Q70EL3 339 aaPredicted RBP16.67■□□□□ 0.26
ATP2A3-211ENST00000572176 PHAXQ9H814 394 aaKnown RBP16.67■□□□□ 0.26
ATP2A3-211ENST00000572176 RIC3Q7Z5B4 369 aa16.66■□□□□ 0.26
ATP2A3-211ENST00000572176 C8orf58Q8NAV2 365 aa16.66■□□□□ 0.26
ATP2A3-211ENST00000572176 CELF1Q92879 486 aaKnown RBP16.66■□□□□ 0.26
ATP2A3-211ENST00000572176 GPRC5DQ9NZD1 345 aa16.66■□□□□ 0.26
ATP2A3-211ENST00000572176 CDHR2Q9BYE9 1310 aa16.66■□□□□ 0.26
ATP2A3-211ENST00000572176 RASSF10A6NK89 507 aa16.65■□□□□ 0.26
ATP2A3-211ENST00000572176 ELL2O00472 640 aaPredicted RBP16.65■□□□□ 0.26
ATP2A3-211ENST00000572176 IRS4O14654 1257 aaPredicted RBP16.65■□□□□ 0.26
ATP2A3-211ENST00000572176 CCDC184Q52MB2 194 aa16.65■□□□□ 0.26
ATP2A3-211ENST00000572176 CIAPIN1Q6FI81 312 aa16.65■□□□□ 0.26
ATP2A3-211ENST00000572176 ADARB2Q9NS39 739 aaKnown RBP16.65■□□□□ 0.26
ATP2A3-211ENST00000572176 VEGFBP49765 207 aa16.64■□□□□ 0.25
ATP2A3-211ENST00000572176 GMPSP49915 693 aaPredicted RBP16.64■□□□□ 0.25
ATP2A3-211ENST00000572176 RTL5Q5HYW3 569 aaPredicted RBP16.64■□□□□ 0.25
ATP2A3-211ENST00000572176 ZBTB38Q8NAP3 1195 aaPredicted RBP16.64■□□□□ 0.25
ATP2A3-211ENST00000572176 THSD7BQ9C0I4 1608 aa16.63■□□□□ 0.25
ATP2A3-211ENST00000572176 TRPM7Q96QT4 1865 aa16.63■□□□□ 0.25
ATP2A3-211ENST00000572176 YDJCA8MPS7 323 aa16.63■□□□□ 0.25
ATP2A3-211ENST00000572176 MYD88Q99836 296 aa16.63■□□□□ 0.25
ATP2A3-211ENST00000572176 RAD17O75943 681 aa16.62■□□□□ 0.25
ATP2A3-211ENST00000572176 CCDC27Q2M243 656 aa16.62■□□□□ 0.25
ATP2A3-211ENST00000572176 CCDC30Q5VVM6 783 aa16.62■□□□□ 0.25
ATP2A3-211ENST00000572176 TSPYL6Q8N831 410 aa16.62■□□□□ 0.25
ATP2A3-211ENST00000572176 CCDC191Q8NCU4 936 aa16.62■□□□□ 0.25
ATP2A3-211ENST00000572176 CHMP4AQ9BY43 222 aa16.62■□□□□ 0.25
ATP2A3-211ENST00000572176 PCCAP05165 728 aaPredicted RBP16.61■□□□□ 0.25
ATP2A3-211ENST00000572176 GPSM2P81274 684 aa16.61■□□□□ 0.25
ATP2A3-211ENST00000572176 FMR1Q06787 632 aaKnown RBP eCLIP16.61■□□□□ 0.25
ATP2A3-211ENST00000572176 TNIP1Q15025 636 aa16.61■□□□□ 0.25
ATP2A3-211ENST00000572176 TNS4Q8IZW8 715 aa16.61■□□□□ 0.25
ATP2A3-211ENST00000572176 TSR2Q969E8 191 aaKnown RBP16.61■□□□□ 0.25
ATP2A3-211ENST00000572176 METTL22Q9BUU2 404 aaPredicted RBP16.61■□□□□ 0.25
ATP2A3-211ENST00000572176 NSFL1CQ9UNZ2 370 aaKnown RBP16.61■□□□□ 0.25
ATP2A3-211ENST00000572176 TRAF5O00463 557 aa16.6■□□□□ 0.25
ATP2A3-211ENST00000572176 DDX58O95786 925 aaKnown RBP16.6■□□□□ 0.25
ATP2A3-211ENST00000572176 HSP90B1P14625 803 aaKnown RBP16.6■□□□□ 0.25
ATP2A3-211ENST00000572176 RPS8P62241 208 aaKnown RBP16.6■□□□□ 0.25
ATP2A3-211ENST00000572176 WASHC4Q2M389 1173 aa16.6■□□□□ 0.25
ATP2A3-211ENST00000572176 BCL2L13Q9BXK5 485 aa16.6■□□□□ 0.25
ATP2A3-211ENST00000572176 CWC25Q9NXE8 425 aaPredicted RBP16.6■□□□□ 0.25
ATP2A3-211ENST00000572176 POLLQ9UGP5 575 aa16.6■□□□□ 0.25
ATP2A3-211ENST00000572176 FOXN1O15353 648 aa16.59■□□□□ 0.25
ATP2A3-211ENST00000572176 DEFB115Q30KQ5 88 aa16.59■□□□□ 0.25
ATP2A3-211ENST00000572176 WWC1Q8IX03 1113 aa16.59■□□□□ 0.25
ATP2A3-211ENST00000572176 TRPM4Q8TD43 1214 aa16.59■□□□□ 0.25
ATP2A3-211ENST00000572176 SEC31BQ9NQW1 1179 aa16.59■□□□□ 0.25
ATP2A3-211ENST00000572176 PGAP2Q9UHJ9 254 aa16.59■□□□□ 0.25
ATP2A3-211ENST00000572176 ABT1Q9ULW3 272 aaKnown RBP16.59■□□□□ 0.25
ATP2A3-211ENST00000572176 PDE8AO60658 829 aa16.58■□□□□ 0.24
ATP2A3-211ENST00000572176 CCDC152Q4G0S7 254 aa16.58■□□□□ 0.24
ATP2A3-211ENST00000572176 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
ATP2A3-211ENST00000572176 TBC1D16Q8TBP0 767 aa16.58■□□□□ 0.24
ATP2A3-211ENST00000572176 EYA3Q99504 573 aa16.58■□□□□ 0.24
ATP2A3-211ENST00000572176 DBNDD1Q9H9R9 158 aa16.58■□□□□ 0.24
ATP2A3-211ENST00000572176 PODXL2Q9NZ53 605 aa16.58■□□□□ 0.24
ATP2A3-211ENST00000572176 MAP3K2Q9Y2U5 619 aa16.58■□□□□ 0.24
ATP2A3-211ENST00000572176 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 IL16Q14005 1332 aa16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 WDR33Q9C0J8 1336 aaKnown RBP16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 SHTN1A0MZ66 631 aa16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 C6orf229H3BNL8 230 aa16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 PSMD14O00487 310 aa16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 HIRAP54198 1017 aaPredicted RBP16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 CST9Q5W186 159 aa16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 KSR2Q6VAB6 950 aa16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 MICALL2Q8IY33 904 aa16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 ZC3H15Q8WU90 426 aaKnown RBP16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 WBP1LQ9NX94 342 aa16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 CNOT7Q9UIV1 285 aaKnown RBP16.57■□□□□ 0.24
ATP2A3-211ENST00000572176 PI4KAP2A4QPH2 592 aa16.56■□□□□ 0.24
ATP2A3-211ENST00000572176 RIMBP2O15034 1052 aa16.56■□□□□ 0.24
ATP2A3-211ENST00000572176 ECE2O60344 883 aa16.56■□□□□ 0.24
ATP2A3-211ENST00000572176 IGKV5-2P06315 115 aa16.56■□□□□ 0.24
ATP2A3-211ENST00000572176 PI4KAP1Q8N8J0 262 aa16.56■□□□□ 0.24
ATP2A3-211ENST00000572176 DPF2Q92785 391 aa16.56■□□□□ 0.24
ATP2A3-211ENST00000572176 JARID2Q92833 1246 aaPredicted RBP16.56■□□□□ 0.24
ATP2A3-211ENST00000572176 AIDAQ96BJ3 306 aa16.56■□□□□ 0.24
ATP2A3-211ENST00000572176 GPR101Q96P66 508 aaPredicted RBP16.56■□□□□ 0.24
ATP2A3-211ENST00000572176 STK31Q9BXU1 1019 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms