RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
RPAIN-211ENST00000572174 ABCC4O15439 1325 aa17.68■□□□□ 0.42
RPAIN-211ENST00000572174 FKBP4Q02790 459 aaKnown RBP eCLIP17.67■□□□□ 0.42
RPAIN-211ENST00000572174 RTL5Q5HYW3 569 aaPredicted RBP17.67■□□□□ 0.42
RPAIN-211ENST00000572174 ZNF784Q8NCA9 323 aaPredicted RBP17.67■□□□□ 0.42
RPAIN-211ENST00000572174 PSMD1Q99460 953 aa17.67■□□□□ 0.42
RPAIN-211ENST00000572174 SRCIN1Q9C0H9 1055 aa17.67■□□□□ 0.42
RPAIN-211ENST00000572174 NFKBIEO00221 500 aa17.66■□□□□ 0.42
RPAIN-211ENST00000572174 RASSF7Q02833 373 aa17.66■□□□□ 0.42
RPAIN-211ENST00000572174 SLC4A10Q6U841 1118 aa17.66■□□□□ 0.42
RPAIN-211ENST00000572174 C3orf67Q6ZVT6 689 aa17.66■□□□□ 0.42
RPAIN-211ENST00000572174 UBE3BQ7Z3V4 1068 aa17.66■□□□□ 0.42
RPAIN-211ENST00000572174 SYNE4Q8N205 404 aa17.66■□□□□ 0.42
RPAIN-211ENST00000572174 SUPT20HQ8NEM7 779 aa17.66■□□□□ 0.42
RPAIN-211ENST00000572174 ATP6V0A2Q9Y487 856 aa17.66■□□□□ 0.42
RPAIN-211ENST00000572174 F6X3S4 739 aa17.65■□□□□ 0.42
RPAIN-211ENST00000572174 H7C1W4 665 aa17.65■□□□□ 0.42
RPAIN-211ENST00000572174 CTSWP56202 376 aa17.65■□□□□ 0.42
RPAIN-211ENST00000572174 BEND3Q5T5X7 828 aa17.65■□□□□ 0.42
RPAIN-211ENST00000572174 CDC5LQ99459 802 aaKnown RBP17.65■□□□□ 0.42
RPAIN-211ENST00000572174 PLA2G12BQ9BX93 195 aa17.65■□□□□ 0.42
RPAIN-211ENST00000572174 VPS33BQ9H267 617 aa17.65■□□□□ 0.42
RPAIN-211ENST00000572174 KDM2BQ8NHM5 1336 aa17.65■□□□□ 0.42
RPAIN-211ENST00000572174 RTL9Q8NET4 1388 aa17.65■□□□□ 0.42
RPAIN-211ENST00000572174 SP8Q8IXZ3 490 aa17.64■□□□□ 0.41
RPAIN-211ENST00000572174 API5Q9BZZ5 524 aaKnown RBP17.64■□□□□ 0.41
RPAIN-211ENST00000572174 GPBP1L1Q9HC44 474 aaPredicted RBP17.64■□□□□ 0.41
RPAIN-211ENST00000572174 C9orf78Q9NZ63 289 aaPredicted RBP17.64■□□□□ 0.41
RPAIN-211ENST00000572174 GRM8O00222 908 aa17.63■□□□□ 0.41
RPAIN-211ENST00000572174 IPO8O15397 1037 aaKnown RBP17.63■□□□□ 0.41
RPAIN-211ENST00000572174 RARSP54136 660 aaKnown RBP17.63■□□□□ 0.41
RPAIN-211ENST00000572174 BCL2L13Q9BXK5 485 aa17.63■□□□□ 0.41
RPAIN-211ENST00000572174 DPY19L2Q6NUT2 758 aa17.62■□□□□ 0.41
RPAIN-211ENST00000572174 ARHGAP45Q92619 1136 aa17.62■□□□□ 0.41
RPAIN-211ENST00000572174 HDAC5Q9UQL6 1122 aa17.62■□□□□ 0.41
RPAIN-211ENST00000572174 SNED1Q8TER0 1413 aa17.62■□□□□ 0.41
RPAIN-211ENST00000572174 CCT4P50991 539 aaKnown RBP17.61■□□□□ 0.41
RPAIN-211ENST00000572174 RPS8P62241 208 aaKnown RBP17.61■□□□□ 0.41
RPAIN-211ENST00000572174 DPP8Q6V1X1 898 aaPredicted RBP17.61■□□□□ 0.41
RPAIN-211ENST00000572174 ANKRD18AQ8IVF6 992 aa17.61■□□□□ 0.41
RPAIN-211ENST00000572174 JDP2Q8WYK2 163 aa17.61■□□□□ 0.41
RPAIN-211ENST00000572174 LTBP1Q14766 1721 aa17.61■□□□□ 0.41
RPAIN-211ENST00000572174 SCN4AP35499 1836 aa17.61■□□□□ 0.41
RPAIN-211ENST00000572174 IARSP41252 1262 aaKnown RBP17.6■□□□□ 0.41
RPAIN-211ENST00000572174 MPNDQ8N594 471 aa17.6■□□□□ 0.41
RPAIN-211ENST00000572174 TTLL11Q8NHH1 800 aa17.6■□□□□ 0.41
RPAIN-211ENST00000572174 CASP7P55210 303 aa17.59■□□□□ 0.41
RPAIN-211ENST00000572174 WDR90Q96KV7 1748 aa17.58■□□□□ 0.41
RPAIN-211ENST00000572174 IGHMBP2P38935 993 aaKnown RBP17.58■□□□□ 0.4
RPAIN-211ENST00000572174 CELF1Q92879 486 aaKnown RBP17.58■□□□□ 0.4
RPAIN-211ENST00000572174 RTFDC1Q9BY42 306 aaPredicted RBP17.58■□□□□ 0.4
RPAIN-211ENST00000572174 UTYO14607 1347 aa17.57■□□□□ 0.4
RPAIN-211ENST00000572174 JARID2Q92833 1246 aaPredicted RBP17.57■□□□□ 0.4
RPAIN-211ENST00000572174 EYA3Q99504 573 aa17.57■□□□□ 0.4
RPAIN-211ENST00000572174 ZNF277Q9NRM2 450 aaPredicted RBP17.57■□□□□ 0.4
RPAIN-211ENST00000572174 NOB1Q9ULX3 412 aaKnown RBP17.57■□□□□ 0.4
RPAIN-211ENST00000572174 A0A1B0GUL6 1792 aa17.57■□□□□ 0.4
RPAIN-211ENST00000572174 ANKRD18BA2A2Z9 1011 aa17.56■□□□□ 0.4
RPAIN-211ENST00000572174 GLTPD2A6NH11 291 aa17.56■□□□□ 0.4
RPAIN-211ENST00000572174 OLFM4Q6UX06 510 aa17.56■□□□□ 0.4
RPAIN-211ENST00000572174 LARGE2Q8N3Y3 721 aa17.56■□□□□ 0.4
RPAIN-211ENST00000572174 MPHOSPH8Q99549 860 aa17.56■□□□□ 0.4
RPAIN-211ENST00000572174 GREM2Q9H772 168 aa17.56■□□□□ 0.4
RPAIN-211ENST00000572174 DUOX1Q9NRD9 1551 aa17.55■□□□□ 0.4
RPAIN-211ENST00000572174 PPIP5K2O43314 1243 aa17.55■□□□□ 0.4
RPAIN-211ENST00000572174 CSF1RP07333 972 aa17.55■□□□□ 0.4
RPAIN-211ENST00000572174 ITGA6P23229 1130 aa17.55■□□□□ 0.4
RPAIN-211ENST00000572174 IFIT5Q13325 482 aaKnown RBP17.55■□□□□ 0.4
RPAIN-211ENST00000572174 NIM1KQ8IY84 436 aa17.55■□□□□ 0.4
RPAIN-211ENST00000572174 ZNF526Q8TF50 670 aaPredicted RBP17.55■□□□□ 0.4
RPAIN-211ENST00000572174 SEC31BQ9NQW1 1179 aa17.55■□□□□ 0.4
RPAIN-211ENST00000572174 BSDC1Q9NW68 430 aaPredicted RBP17.55■□□□□ 0.4
RPAIN-211ENST00000572174 ANKIB1Q9P2G1 1089 aa17.55■□□□□ 0.4
RPAIN-211ENST00000572174 NSFL1CQ9UNZ2 370 aaKnown RBP17.55■□□□□ 0.4
RPAIN-211ENST00000572174 PSME4Q14997 1843 aa17.54■□□□□ 0.4
RPAIN-211ENST00000572174 XDHP47989 1333 aa17.54■□□□□ 0.4
RPAIN-211ENST00000572174 EIF6P56537 245 aaKnown RBP17.54■□□□□ 0.4
RPAIN-211ENST00000572174 CCDC57Q2TAC2 916 aa17.54■□□□□ 0.4
RPAIN-211ENST00000572174 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
RPAIN-211ENST00000572174 CCDC85AQ96PX6 553 aaPredicted RBP17.54■□□□□ 0.4
RPAIN-211ENST00000572174 PODXL2Q9NZ53 605 aa17.54■□□□□ 0.4
RPAIN-211ENST00000572174 CHMP3Q9Y3E7 222 aa17.54■□□□□ 0.4
RPAIN-211ENST00000572174 PRELPP51888 382 aa17.53■□□□□ 0.4
RPAIN-211ENST00000572174 KIAA2012Q0VF49 1180 aa17.53■□□□□ 0.4
RPAIN-211ENST00000572174 FAM161AQ3B820 660 aa17.53■□□□□ 0.4
RPAIN-211ENST00000572174 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
RPAIN-211ENST00000572174 ZKSCAN2Q63HK3 967 aa17.53■□□□□ 0.4
RPAIN-211ENST00000572174 C16orf71Q8IYS4 520 aaPredicted RBP17.53■□□□□ 0.4
RPAIN-211ENST00000572174 GGA1Q9UJY5 639 aa17.53■□□□□ 0.4
RPAIN-211ENST00000572174 COL4A1P02462 1669 aa17.52■□□□□ 0.4
RPAIN-211ENST00000572174 IQCA1LA6NCM1 817 aa17.52■□□□□ 0.4
RPAIN-211ENST00000572174 FZD9O00144 591 aa17.52■□□□□ 0.4
RPAIN-211ENST00000572174 FOXO4P98177 505 aa17.52■□□□□ 0.4
RPAIN-211ENST00000572174 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.4
RPAIN-211ENST00000572174 ANKRD2Q9GZV1 360 aa17.52■□□□□ 0.4
RPAIN-211ENST00000572174 C6orf229H3BNL8 230 aa17.51■□□□□ 0.39
RPAIN-211ENST00000572174 NBPF7P0C2Y1 421 aaPredicted RBP17.51■□□□□ 0.39
RPAIN-211ENST00000572174 UBTFL1P0CB47 393 aaPredicted RBP17.51■□□□□ 0.39
RPAIN-211ENST00000572174 MS4A1P11836 297 aa17.51■□□□□ 0.39
RPAIN-211ENST00000572174 ATP2B4P23634 1241 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms