RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 METTL22Q9BUU2 404 aaPredicted RBP22.02■■□□□ 1.12
MAP1LC3B-208ENST00000570189 EIF6P56537 245 aaKnown RBP22.01■■□□□ 1.11
MAP1LC3B-208ENST00000570189 SLC51AQ86UW1 340 aa22.01■■□□□ 1.11
MAP1LC3B-208ENST00000570189 LDHDQ86WU2 507 aa22.01■■□□□ 1.11
MAP1LC3B-208ENST00000570189 LARGE2Q8N3Y3 721 aa22.01■■□□□ 1.11
MAP1LC3B-208ENST00000570189 HACL1Q9UJ83 578 aa22.01■■□□□ 1.11
MAP1LC3B-208ENST00000570189 IRS4O14654 1257 aaPredicted RBP22■■□□□ 1.11
MAP1LC3B-208ENST00000570189 PCCAP05165 728 aaPredicted RBP22■■□□□ 1.11
MAP1LC3B-208ENST00000570189 TWISTNBQ3B726 338 aaPredicted RBP22■■□□□ 1.11
MAP1LC3B-208ENST00000570189 KLRG1Q96E93 195 aa22■■□□□ 1.11
MAP1LC3B-208ENST00000570189 KIAA2012Q0VF49 1180 aa21.99■■□□□ 1.11
MAP1LC3B-208ENST00000570189 DPP8Q6V1X1 898 aaPredicted RBP21.99■■□□□ 1.11
MAP1LC3B-208ENST00000570189 KSR2Q6VAB6 950 aa21.99■■□□□ 1.11
MAP1LC3B-208ENST00000570189 PNMA8AQ86V59 439 aaPredicted RBP21.99■■□□□ 1.11
MAP1LC3B-208ENST00000570189 NIM1KQ8IY84 436 aa21.99■■□□□ 1.11
MAP1LC3B-208ENST00000570189 MPNDQ8N594 471 aa21.99■■□□□ 1.11
MAP1LC3B-208ENST00000570189 JMYQ8N9B5 988 aa21.99■■□□□ 1.11
MAP1LC3B-208ENST00000570189 STK31Q9BXU1 1019 aa21.99■■□□□ 1.11
MAP1LC3B-208ENST00000570189 FANCIQ9NVI1 1328 aa21.99■■□□□ 1.11
MAP1LC3B-208ENST00000570189 COL4A1P02462 1669 aa21.98■■□□□ 1.11
MAP1LC3B-208ENST00000570189 TCERG1O14776 1098 aaKnown RBP21.98■■□□□ 1.11
MAP1LC3B-208ENST00000570189 PPIP5K2O43314 1243 aa21.98■■□□□ 1.11
MAP1LC3B-208ENST00000570189 POTEIP0CG38 1075 aa21.98■■□□□ 1.11
MAP1LC3B-208ENST00000570189 POTEJP0CG39 1038 aa21.98■■□□□ 1.11
MAP1LC3B-208ENST00000570189 MYD88Q99836 296 aa21.98■■□□□ 1.11
MAP1LC3B-208ENST00000570189 CWC25Q9NXE8 425 aaPredicted RBP21.98■■□□□ 1.11
MAP1LC3B-208ENST00000570189 CDHR2Q9BYE9 1310 aa21.98■■□□□ 1.11
MAP1LC3B-208ENST00000570189 EPHX2P34913 555 aa21.97■■□□□ 1.11
MAP1LC3B-208ENST00000570189 PASKQ96RG2 1323 aa21.97■■□□□ 1.11
MAP1LC3B-208ENST00000570189 AOC3Q16853 763 aa21.96■■□□□ 1.11
MAP1LC3B-208ENST00000570189 CELF1Q92879 486 aaKnown RBP21.96■■□□□ 1.11
MAP1LC3B-208ENST00000570189 ZNRF3Q9ULT6 936 aa21.96■■□□□ 1.11
MAP1LC3B-208ENST00000570189 MAP3K2Q9Y2U5 619 aa21.96■■□□□ 1.11
MAP1LC3B-208ENST00000570189 PI4KAP2A4QPH2 592 aa21.95■■□□□ 1.1
MAP1LC3B-208ENST00000570189 SCNN1DP51172 638 aa21.95■■□□□ 1.1
MAP1LC3B-208ENST00000570189 PI4KAP1Q8N8J0 262 aa21.95■■□□□ 1.1
MAP1LC3B-208ENST00000570189 PDE8AO60658 829 aa21.94■■□□□ 1.1
MAP1LC3B-208ENST00000570189 IGKV5-2P06315 115 aa21.94■■□□□ 1.1
MAP1LC3B-208ENST00000570189 HTRA3P83110 453 aa21.94■■□□□ 1.1
MAP1LC3B-208ENST00000570189 CREBZFQ9NS37 354 aa21.94■■□□□ 1.1
MAP1LC3B-208ENST00000570189 ITGBL1O95965 494 aaPredicted RBP21.93■■□□□ 1.1
MAP1LC3B-208ENST00000570189 RPS8P62241 208 aaKnown RBP21.93■■□□□ 1.1
MAP1LC3B-208ENST00000570189 VAMP4O75379 141 aa21.92■■□□□ 1.1
MAP1LC3B-208ENST00000570189 SLC4A2P04920 1241 aa21.92■■□□□ 1.1
MAP1LC3B-208ENST00000570189 NEXNQ0ZGT2 675 aa21.92■■□□□ 1.1
MAP1LC3B-208ENST00000570189 CCDC152Q4G0S7 254 aa21.92■■□□□ 1.1
MAP1LC3B-208ENST00000570189 RTL5Q5HYW3 569 aaPredicted RBP21.92■■□□□ 1.1
MAP1LC3B-208ENST00000570189 ZNF428Q96B54 188 aa21.92■■□□□ 1.1
MAP1LC3B-208ENST00000570189 PODXL2Q9NZ53 605 aa21.92■■□□□ 1.1
MAP1LC3B-208ENST00000570189 PCNTO95613 3336 aa21.91■■□□□ 1.1
MAP1LC3B-208ENST00000570189 RTL9Q8NET4 1388 aa21.91■■□□□ 1.1
MAP1LC3B-208ENST00000570189 LMOD1P29536 600 aaPredicted RBP21.91■■□□□ 1.1
MAP1LC3B-208ENST00000570189 CXCL9Q07325 125 aa21.91■■□□□ 1.1
MAP1LC3B-208ENST00000570189 PSME4Q14997 1843 aa21.9■■□□□ 1.1
MAP1LC3B-208ENST00000570189 ZNF521Q96K83 1311 aa21.9■■□□□ 1.1
MAP1LC3B-208ENST00000570189 FLIIQ13045 1269 aa21.9■■□□□ 1.1
MAP1LC3B-208ENST00000570189 USP50Q70EL3 339 aaPredicted RBP21.9■■□□□ 1.1
MAP1LC3B-208ENST00000570189 G2E3Q7L622 706 aa21.9■■□□□ 1.1
MAP1LC3B-208ENST00000570189 GJA3Q9Y6H8 435 aa21.9■■□□□ 1.1
MAP1LC3B-208ENST00000570189 NEURL1BA8MQ27 555 aa21.89■■□□□ 1.09
MAP1LC3B-208ENST00000570189 EAPPQ56P03 285 aaPredicted RBP21.89■■□□□ 1.09
MAP1LC3B-208ENST00000570189 MYH16Q9H6N6 1097 aa21.89■■□□□ 1.09
MAP1LC3B-208ENST00000570189 GPRC5DQ9NZD1 345 aa21.89■■□□□ 1.09
MAP1LC3B-208ENST00000570189 TRPM7Q96QT4 1865 aa21.89■■□□□ 1.09
MAP1LC3B-208ENST00000570189 EXOSC9Q06265 439 aaKnown RBP21.88■■□□□ 1.09
MAP1LC3B-208ENST00000570189 TNIP1Q15025 636 aa21.88■■□□□ 1.09
MAP1LC3B-208ENST00000570189 CIAPIN1Q6FI81 312 aa21.88■■□□□ 1.09
MAP1LC3B-208ENST00000570189 POLLQ9UGP5 575 aa21.88■■□□□ 1.09
MAP1LC3B-208ENST00000570189 NSFL1CQ9UNZ2 370 aaKnown RBP21.88■■□□□ 1.09
MAP1LC3B-208ENST00000570189 H7C1W4 665 aa21.87■■□□□ 1.09
MAP1LC3B-208ENST00000570189 EPS15P42566 896 aa21.87■■□□□ 1.09
MAP1LC3B-208ENST00000570189 CTSWP56202 376 aa21.87■■□□□ 1.09
MAP1LC3B-208ENST00000570189 GPSM2P81274 684 aa21.87■■□□□ 1.09
MAP1LC3B-208ENST00000570189 WASHC4Q2M389 1173 aa21.87■■□□□ 1.09
MAP1LC3B-208ENST00000570189 FAM9BQ8IZU0 186 aa21.87■■□□□ 1.09
MAP1LC3B-208ENST00000570189 EYA3Q99504 573 aa21.87■■□□□ 1.09
MAP1LC3B-208ENST00000570189 PLA2G12BQ9BX93 195 aa21.87■■□□□ 1.09
MAP1LC3B-208ENST00000570189 SPINK5Q9NQ38 1064 aaPredicted RBP21.87■■□□□ 1.09
MAP1LC3B-208ENST00000570189 SEC31BQ9NQW1 1179 aa21.87■■□□□ 1.09
MAP1LC3B-208ENST00000570189 SPEF2Q9C093 1822 aa21.86■■□□□ 1.09
MAP1LC3B-208ENST00000570189 YDJCA8MPS7 323 aa21.86■■□□□ 1.09
MAP1LC3B-208ENST00000570189 TTLL11Q8NHH1 800 aa21.86■■□□□ 1.09
MAP1LC3B-208ENST00000570189 TBC1D16Q8TBP0 767 aa21.86■■□□□ 1.09
MAP1LC3B-208ENST00000570189 ADARB2Q9NS39 739 aaKnown RBP21.86■■□□□ 1.09
MAP1LC3B-208ENST00000570189 SCN9AQ15858 1988 aa21.86■■□□□ 1.09
MAP1LC3B-208ENST00000570189 CWF19L2Q2TBE0 894 aaKnown RBP21.85■■□□□ 1.09
MAP1LC3B-208ENST00000570189 CNTROBQ8N137 903 aa21.85■■□□□ 1.09
MAP1LC3B-208ENST00000570189 LINS1Q8NG48 757 aa21.85■■□□□ 1.09
MAP1LC3B-208ENST00000570189 DNAAF4Q8WXU2 420 aa21.85■■□□□ 1.09
MAP1LC3B-208ENST00000570189 CLEC11AQ9Y240 323 aa21.85■■□□□ 1.09
MAP1LC3B-208ENST00000570189 ZNF609O15014 1411 aa21.85■■□□□ 1.09
MAP1LC3B-208ENST00000570189 FKBP5Q13451 457 aaPredicted RBP21.84■■□□□ 1.09
MAP1LC3B-208ENST00000570189 GCKRQ14397 625 aa21.84■■□□□ 1.09
MAP1LC3B-208ENST00000570189 SALL2Q9Y467 1007 aaPredicted RBP21.84■■□□□ 1.09
MAP1LC3B-208ENST00000570189 TMEM88BA6NKF7 163 aa21.83■■□□□ 1.09
MAP1LC3B-208ENST00000570189 GMPSP49915 693 aaPredicted RBP21.83■■□□□ 1.09
MAP1LC3B-208ENST00000570189 CASP7P55210 303 aa21.83■■□□□ 1.09
MAP1LC3B-208ENST00000570189 MAP1SQ66K74 1059 aaPredicted RBP21.83■■□□□ 1.09
MAP1LC3B-208ENST00000570189 ANKRD18AQ8IVF6 992 aa21.83■■□□□ 1.09
MAP1LC3B-208ENST00000570189 DPF2Q92785 391 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms