RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 HLFQ16534 295 aa11.68□□□□□ -0.54
LINC00555-201ENST00000569288 TTC22Q5TAA0 569 aa11.68□□□□□ -0.54
LINC00555-201ENST00000569288 GPATCH3Q96I76 525 aa11.68□□□□□ -0.54
LINC00555-201ENST00000569288 UTP14AQ9BVJ6 771 aaKnown RBP11.68□□□□□ -0.54
LINC00555-201ENST00000569288 NYXQ9GZU5 481 aa11.68□□□□□ -0.54
LINC00555-201ENST00000569288 SH3TC1Q8TE82 1336 aa11.67□□□□□ -0.54
LINC00555-201ENST00000569288 ZBTB22O15209 634 aa11.67□□□□□ -0.54
LINC00555-201ENST00000569288 PIP4K2AP48426 406 aaPredicted RBP11.67□□□□□ -0.54
LINC00555-201ENST00000569288 LMBR1LQ6UX01 489 aa11.67□□□□□ -0.54
LINC00555-201ENST00000569288 UPF2Q9HAU5 1272 aaKnown RBP11.67□□□□□ -0.54
LINC00555-201ENST00000569288 BCL2L12Q9HB09 334 aa11.67□□□□□ -0.54
LINC00555-201ENST00000569288 TRMT112Q9UI30 125 aaKnown RBP11.67□□□□□ -0.54
LINC00555-201ENST00000569288 EXOC6BQ9Y2D4 811 aa11.67□□□□□ -0.54
LINC00555-201ENST00000569288 MSH5O43196 834 aa11.66□□□□□ -0.54
LINC00555-201ENST00000569288 GLRX3O76003 335 aaKnown RBP11.66□□□□□ -0.54
LINC00555-201ENST00000569288 ZBTB7AO95365 584 aa11.66□□□□□ -0.54
LINC00555-201ENST00000569288 MX1P20591 662 aa11.66□□□□□ -0.54
LINC00555-201ENST00000569288 POLD1P28340 1107 aa11.66□□□□□ -0.54
LINC00555-201ENST00000569288 TM4SF1P30408 202 aa11.66□□□□□ -0.54
LINC00555-201ENST00000569288 CCDC57Q2TAC2 916 aa11.66□□□□□ -0.54
LINC00555-201ENST00000569288 EPHA10Q5JZY3 1008 aa11.66□□□□□ -0.54
LINC00555-201ENST00000569288 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
LINC00555-201ENST00000569288 CASC1Q6TDU7 716 aa11.66□□□□□ -0.54
LINC00555-201ENST00000569288 SMIM5Q71RC9 77 aa11.66□□□□□ -0.54
LINC00555-201ENST00000569288 TBC1D2BQ9UPU7 963 aa11.66□□□□□ -0.54
LINC00555-201ENST00000569288 EYA2O00167 538 aa11.65□□□□□ -0.54
LINC00555-201ENST00000569288 IRS4O14654 1257 aaPredicted RBP11.65□□□□□ -0.54
LINC00555-201ENST00000569288 IFIT5Q13325 482 aaKnown RBP11.65□□□□□ -0.54
LINC00555-201ENST00000569288 OS9Q13438 667 aaPredicted RBP11.65□□□□□ -0.54
LINC00555-201ENST00000569288 SF3B3Q15393 1217 aaKnown RBP11.65□□□□□ -0.54
LINC00555-201ENST00000569288 TTLL11Q8NHH1 800 aa11.65□□□□□ -0.54
LINC00555-201ENST00000569288 SRP68Q9UHB9 627 aaKnown RBP11.65□□□□□ -0.54
LINC00555-201ENST00000569288 AKAP2Q9Y2D5 859 aa11.65□□□□□ -0.54
LINC00555-201ENST00000569288 CDC45O75419 566 aa11.64□□□□□ -0.55
LINC00555-201ENST00000569288 SASH1O94885 1247 aa11.64□□□□□ -0.55
LINC00555-201ENST00000569288 TPTE2Q6XPS3 522 aa11.64□□□□□ -0.55
LINC00555-201ENST00000569288 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC00555-201ENST00000569288 ECHDC1Q9NTX5 307 aa11.64□□□□□ -0.55
LINC00555-201ENST00000569288 ATF5Q9Y2D1 282 aaPredicted RBP11.64□□□□□ -0.55
LINC00555-201ENST00000569288 ANKRD18BA2A2Z9 1011 aa11.63□□□□□ -0.55
LINC00555-201ENST00000569288 IGSF3O75054 1194 aa11.63□□□□□ -0.55
LINC00555-201ENST00000569288 IFIT2P09913 472 aaKnown RBP11.63□□□□□ -0.55
LINC00555-201ENST00000569288 CTSWP56202 376 aa11.63□□□□□ -0.55
LINC00555-201ENST00000569288 CCDC152Q4G0S7 254 aa11.63□□□□□ -0.55
LINC00555-201ENST00000569288 SUSD4Q5VX71 490 aa11.63□□□□□ -0.55
LINC00555-201ENST00000569288 FAM89AQ96GI7 184 aa11.63□□□□□ -0.55
LINC00555-201ENST00000569288 SETDB2Q96T68 719 aa11.63□□□□□ -0.55
LINC00555-201ENST00000569288 NIP7Q9Y221 180 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC00555-201ENST00000569288 ZNF330Q9Y3S2 320 aaPredicted RBP11.63□□□□□ -0.55
LINC00555-201ENST00000569288 BRCA1P38398 1863 aaKnown RBP11.63□□□□□ -0.55
LINC00555-201ENST00000569288 ANKRD31Q8N7Z5 1873 aa11.63□□□□□ -0.55
LINC00555-201ENST00000569288 KIAA1551Q9HCM1 1747 aa11.63□□□□□ -0.55
LINC00555-201ENST00000569288 UBN2Q6ZU65 1347 aa11.62□□□□□ -0.55
LINC00555-201ENST00000569288 RIC1Q4ADV7 1423 aa11.62□□□□□ -0.55
LINC00555-201ENST00000569288 DLEC1Q9Y238 1755 aa11.62□□□□□ -0.55
LINC00555-201ENST00000569288 HIP1O00291 1037 aa11.62□□□□□ -0.55
LINC00555-201ENST00000569288 NTSR2O95665 410 aa11.62□□□□□ -0.55
LINC00555-201ENST00000569288 MMP10P09238 476 aa11.62□□□□□ -0.55
LINC00555-201ENST00000569288 NFIXQ14938 502 aa11.62□□□□□ -0.55
LINC00555-201ENST00000569288 ATG9AQ7Z3C6 839 aa11.62□□□□□ -0.55
LINC00555-201ENST00000569288 C16orf71Q8IYS4 520 aaPredicted RBP11.62□□□□□ -0.55
LINC00555-201ENST00000569288 ZNF512BQ96KM6 892 aaPredicted RBP11.62□□□□□ -0.55
LINC00555-201ENST00000569288 ARXQ96QS3 562 aa11.62□□□□□ -0.55
LINC00555-201ENST00000569288 CEP126Q9P2H0 1117 aa11.62□□□□□ -0.55
LINC00555-201ENST00000569288 CARMIL3Q8ND23 1372 aa11.62□□□□□ -0.55
LINC00555-201ENST00000569288 POLRMTO00411 1230 aaKnown RBP11.61□□□□□ -0.55
LINC00555-201ENST00000569288 SMARCA5O60264 1052 aaPredicted RBP11.61□□□□□ -0.55
LINC00555-201ENST00000569288 ATP5JP18859 108 aa11.61□□□□□ -0.55
LINC00555-201ENST00000569288 SDSP20132 328 aa11.61□□□□□ -0.55
LINC00555-201ENST00000569288 TBC1D9BQ66K14 1250 aa11.61□□□□□ -0.55
LINC00555-201ENST00000569288 DDRGK1Q96HY6 314 aa11.61□□□□□ -0.55
LINC00555-201ENST00000569288 RIPOR2Q9Y4F9 1068 aa11.61□□□□□ -0.55
LINC00555-201ENST00000569288 CD2APQ9Y5K6 639 aa11.61□□□□□ -0.55
LINC00555-201ENST00000569288 PARP3Q9Y6F1 533 aa11.61□□□□□ -0.55
LINC00555-201ENST00000569288 MROH5Q6ZUA9 1318 aa11.6□□□□□ -0.55
LINC00555-201ENST00000569288 C10orf71Q711Q0 1435 aa11.6□□□□□ -0.55
LINC00555-201ENST00000569288 LAMB2P55268 1798 aa11.6□□□□□ -0.55
LINC00555-201ENST00000569288 ABCC12Q96J65 1359 aa11.6□□□□□ -0.55
LINC00555-201ENST00000569288 REC8O95072 547 aa11.6□□□□□ -0.55
LINC00555-201ENST00000569288 GSPT1P15170 499 aaKnown RBP11.6□□□□□ -0.55
LINC00555-201ENST00000569288 ANP32AP39687 249 aaKnown RBP11.6□□□□□ -0.55
LINC00555-201ENST00000569288 RBM25P49756 843 aaKnown RBP11.6□□□□□ -0.55
LINC00555-201ENST00000569288 DDR1Q08345 913 aa11.6□□□□□ -0.55
LINC00555-201ENST00000569288 TNNI3KQ59H18 835 aa11.6□□□□□ -0.55
LINC00555-201ENST00000569288 MSL1Q68DK7 614 aa11.6□□□□□ -0.55
LINC00555-201ENST00000569288 CNTROBQ8N137 903 aa11.6□□□□□ -0.55
LINC00555-201ENST00000569288 PI4K2BQ8TCG2 481 aa11.6□□□□□ -0.55
LINC00555-201ENST00000569288 EAF2Q96CJ1 260 aaPredicted RBP11.6□□□□□ -0.55
LINC00555-201ENST00000569288 EVI5LQ96CN4 794 aa11.6□□□□□ -0.55
LINC00555-201ENST00000569288 CDC5LQ99459 802 aaKnown RBP11.6□□□□□ -0.55
LINC00555-201ENST00000569288 FPGT-TNNI3KV9GXZ4 949 aa11.6□□□□□ -0.55
LINC00555-201ENST00000569288 MYH3P11055 1940 aa11.6□□□□□ -0.55
LINC00555-201ENST00000569288 RFX7Q2KHR2 1363 aa11.59□□□□□ -0.55
LINC00555-201ENST00000569288 SERPINB2P05120 415 aa11.59□□□□□ -0.55
LINC00555-201ENST00000569288 GPTP24298 496 aa11.59□□□□□ -0.55
LINC00555-201ENST00000569288 TMED8Q6PL24 325 aaPredicted RBP11.59□□□□□ -0.55
LINC00555-201ENST00000569288 SKAP1Q86WV1 359 aa11.59□□□□□ -0.55
LINC00555-201ENST00000569288 TBC1D32Q96NH3 1257 aa11.59□□□□□ -0.55
LINC00555-201ENST00000569288 NLRP3Q96P20 1036 aa11.59□□□□□ -0.55
LINC00555-201ENST00000569288 PA2G4Q9UQ80 394 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms